Lates calcarifer (barramundi perch): 108888203
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Entry
108888203 CDS
T04895
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108888203
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108888203
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108888203
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
108888203
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
108888203
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108888203
Prokaryotic type
108888203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
B3_4
EF-1_beta_acid
Arc1p_N_like
EAD7
Motif
Other DBs
NCBI-GeneID:
108888203
NCBI-ProteinID:
XP_018539603
UniProt:
A0A4W6C7E3
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Position
LG21:complement(23425388..23442133)
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AA seq
849 aa
AA seq
DB search
MPTVGVKRDLLFKALGRTYTDEEFDELCFEFGLELDEITSEKEIISREQGDSKASGASDI
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRVSPISGEPQKLIITKATAAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKPPG
DICFKPLNQTKEYTATQLMSLYKTDSHLRHYLHIIEDKPVYPVIYDSNGIVLSMPPIING
DHSKISLKTKNVFIECTATDVTKAKIVLDMMVTMFSEYCSQPFTVEEAEVVYPDGRTCIY
PELAYRKEKLTSEFINRKVGINESTEKIAQLLTRMCLRSQATGVGDEIEVEIPPTRSDVI
HACDIMEDAAIAYGFNNITRTTPRTYTVANQFPLNKLTELLRQDLAAAGFTEALNFALCS
QEDIADKLGKKISETKAAHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
VVLKDETKDVGASNSRRFCAVYYNKSPGFEVIHGLLDRTMQLLEVQPACGEGYHIQAADD
STFFPGRCAEIFVRGKSVGRLGVLHPDVINRFELTMPCSALEMDIEPFLGHTAETLLTHD
VPMQEVIKHKFPTRNGSCQAPAPGPTSTKTVFGDMSTPAGLKALNDFLADKSYIEGFAAS
QADIAVFDAIPSAPPLTLCHLLRWYSHIKSFQRERAGLPSAMSQFVLPAIPPASTHNASD
DDDDIDLFGSDDEAESVEAARIKEQRLAEYAAKKSKKPALIAKSSILLDVKPWDDETDMT
KLEECVRSVSMDGLLWGQSKLVPVGYGIKKLQIGCVVEDDKVGTDLLEEAITAFEEYVQS
VDVAAFNKI
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtcaaaagggatcttctctttaaagccttgggcagaacgtacact
gatgaggagtttgacgagctgtgctttgaatttggactggagctggatgaaataacatca
gagaaggagataatcagccgagagcagggtgactccaaggcatcaggagcatctgacatc
atcttgtacaagatcgatgtgccagctaaccgctatgacttgctgtgtctggaggggctg
gtccgtggactgcaggtcttcaagaataagctggaggcacctcgctacagacgcgttagc
ccaatcagcggagagccacagaagctgatcatcaccaaggcgacagcagcagtgcggccc
catgctgtggcagcagtgctgaggaacatcaccttcacgcaggagcgctatgacagcttc
atcgagctacaggagaaactccaccaaaacatctgcaggaagaggagcctggtggcgatc
gggacccatgacctggacaccatatctggtcctttcacatacacagccaaacctccaggg
gacatctgcttcaaacccctcaaccagaccaaagaatacactgccacccaactcatgagc
ctctataagacagacagccacttgaggcattaccttcacattattgaagacaagcctgtg
taccctgtcatctatgacagcaacggcattgtcctgtccatgccccctattatcaatggg
gaccattcaaaaatcagcctgaagacaaagaacgtcttcattgagtgcacagccacagat
gtgaccaaggcaaagatcgtcttggacatgatggtgaccatgttcagcgagtattgttcc
cagcctttcacggtagaggaggctgaggtggtgtacccagatggcaggacctgcatatac
ccagagctggcttacaggaaggagaagcttaccagtgagttcatcaaccgcaaagttggc
atcaatgagtcaactgagaaaattgcccagctgctgaccaggatgtgcctgcgctcccag
gctacaggggttggcgatgagattgaggttgagattccacccacgcgctcagacgtcatc
cacgcctgtgatatcatggaggacgctgccatcgcatatggtttcaacaacatcactcgc
actacaccacgcacttacactgtagccaaccagttcccattaaataaactgacagagctg
ttgagacaagacttggcagccgctggattcacagaggccctcaactttgccctgtgttct
caggaagatatagcagataagcttgggaagaagatctcagaaaccaaggctgctcacatc
tccaatcccaagacagctgagttccaggtggcgcgcaccactttgctgccaggtcttctg
aaaaccatagctgccaacaggaagatgccccttccccttaaactgtttgagatatctgat
gtggtgctcaaggatgagaccaaagatgttggagctagtaacagtcggcgtttctgtgcc
gtgtactacaacaagagcccgggctttgaggtgatccacggcctgctagaccgaaccatg
caactgctggaggtgcagcctgcctgcggtgagggctaccacatccaggccgcagacgat
tccacctttttccccggtcgctgcgcagaaatctttgtccgtggaaagagcgtagggcgt
ctcggagtcctgcacccagatgtcatcaaccgcttcgagctgaccatgccctgctctgcc
cttgagatggacatcgagcccttccttggccacaccgccgaaaccctcctcacacatgat
gtccccatgcaggaagtcatcaagcacaagttccccacgcgaaacggttcctgccaggcc
ccagcccccggcccgacttctacaaaaactgtgtttggtgacatgagcacgccggctggt
cttaaagctcttaatgattttttggcggacaaaagctacattgagggctttgcagcgtct
caagctgacatagcggtgtttgatgccatcccctctgctcccccgctgaccctctgccac
ctcctgcgctggtacagtcacatcaagtccttccagagggagagagctggcctcccatca
gccatgagtcagtttgtcctcccagccattccccccgcttcaacacacaacgccagtgac
gacgatgacgacatcgacctgtttggctcagacgatgaggctgagagcgtggaggctgcg
aggatcaaggagcagcgcctcgcggagtacgccgccaagaagtccaagaagccagctctc
attgccaagtcctccatcttgcttgacgtcaagccctgggacgacgagacggacatgacc
aagctggaggagtgcgtccgcagtgtcagcatggacgggctactgtgggggcagtccaag
ctggtcccggtgggctacggcatcaagaagctccaaataggatgcgtagtggaggatgac
aaagtgggcacggatctgctggaggaagccatcaccgccttcgaggaatatgttcagtct
gtggatgtggctgctttcaacaagatctga
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