Lates calcarifer (barramundi perch): 108888204
Help
Entry
108888204 CDS
T04895
Symbol
acsl3a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3a
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00061
Fatty acid biosynthesis
lcf00071
Fatty acid degradation
lcf01100
Metabolic pathways
lcf01212
Fatty acid metabolism
lcf03320
PPAR signaling pathway
lcf04146
Peroxisome
lcf04216
Ferroptosis
lcf04920
Adipocytokine signaling pathway
Module
lcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108888204 (acsl3a)
00071 Fatty acid degradation
108888204 (acsl3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108888204 (acsl3a)
09143 Cell growth and death
04216 Ferroptosis
108888204 (acsl3a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108888204 (acsl3a)
03320 PPAR signaling pathway
108888204 (acsl3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108888204 (acsl3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108888204 (acsl3a)
Enzymes [BR:
lcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108888204 (acsl3a)
Lipid biosynthesis proteins [BR:
lcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108888204 (acsl3a)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
108888204 (acsl3a)
Exosomal proteins of breast cancer cells
108888204 (acsl3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108888204
NCBI-ProteinID:
XP_018539605
UniProt:
A0AAJ8DK39
LinkDB
All DBs
Position
LG21:23443923..23473123
Genome browser
AA seq
719 aa
AA seq
DB search
MKLKEDLNPMLLLLFHLMVWIYTFITFLPYYLFSWVSEPVGGFCGTEEERAKRAKSISVL
GCPEGPYRAVSATKRLVTSMHPGVDTLDKLFEYAAMRSPHSKCLGTREVISEEDEHQSNG
KVFKKVVLGEYCWRSYKEVHTAAYQLSSGLAALEQQPKNNIAIFCETRAEWFIAAQACFM
NNFTLVTLYSTLGGPAIAHGLNETQVTHVITSRELLETKLKAILSEVPRLQHIIVVDDTP
TSWPGYPHGITVHNMAAVQKLGAKPENATRERAQPLPSDIAVIMYTSGSTGIPKGVMISH
SNMIAGITGMAERLSYLNETDTYIAYLPLAHVLELTAEHIVVSLGFKIGYSSPQTLVDQS
TKIKTGSKGDTSVLQPTVMAAVPEIMDRIYKNVITKVEEMNCVQRTLFILAYNYKLKQLA
KGYSTPLCDKLVFRKIRSLLGGQLRVLLSGGAPLSASTQQFMNVCFCCPVGQGYGLTETC
GTGTLCEQWDYSTGRVGGPLVCCEIKLRDWVEGGYRSKDKPHPRGEILIGGSNISMGYFK
NEAKSQEDFFVDENSQRWFCTGDIGEFHKDGCLKIIDRKKDLVKLQAGEYVSLGKVEAML
KNCPLVDNICAYANSEETYVIGFVVPNQKHLLALADQYSIRGSFEELCNSKAMEELVLKV
ITGAALAAQLERFEIPRKIRLSPDPWTPETGLVTDAFKLKRRELKTHYQDDIERMYGGK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaggaggacctgaaccccatgctgctgctcctcttccacctcatggtatgg
atctacaccttcatcaccttcctgccttactacctcttcagctgggtctcagagcccgtc
gggggcttctgcggcacagaggaggagcgagccaagagagccaagagtatctctgtgctg
ggatgtcccgagggaccctacagagcagtgagtgccaccaagaggctggtgacgtcgatg
cacccgggagtggacaccctggataagttgtttgaatatgcggccatgaggtccccccac
agcaaatgtcttgggacgagggaggtgatcagtgaggaggacgagcatcagagcaatggg
aaggtgtttaaaaaggtagttctgggtgagtactgttggcgctcctataaggaggtccac
acagcagcgtaccagctgagcagtggtttggcagcactggaacagcagccgaaaaacaac
atcgccatcttctgtgagacacgagccgagtggttcatagctgcccaggcctgcttcatg
aacaacttcacactggtaaccctttactctacactgggaggtccagccatcgctcatggg
ctgaacgagactcaggtgacccacgttatcaccagcagagagctcctggagaccaaactc
aaggctatcctaagtgaagttccaaggctgcagcatatcattgtagtggatgacacacca
acctcatggcccggctatccgcatggcatcactgtccacaacatggctgctgtgcagaaa
ctgggggccaagcctgagaatgccacacgtgagcgtgcacagccgctgccttcagacatt
gcagtcatcatgtatacaagcggatccacgggcataccaaagggcgtcatgatctcccat
agcaacatgattgctggcatcacaggaatggctgagcgactgtcttatctgaatgagacg
gacacgtacattgcctacctgcctcttgcccatgtactggagctcactgcagagcacata
gttgtatctctcggctttaagatcggttactcctcacctcagactcttgtcgaccagtca
accaaaatcaagacaggaagcaagggagacaccagcgtcctgcagcccactgtgatggca
gctgttccggagatcatggatcgtatctataagaatgtgatcaccaaggttgaagagatg
aattgcgtccagcgaactctcttcattctggcatacaactacaagctgaagcagcttgcc
aaaggatatagcacacctctatgtgacaagctggtgttcaggaaaattcgctctctgctg
ggaggtcagctgcgagtcttgttatcaggaggagcgccactctctgcatctacacagcag
ttcatgaatgtgtgtttctgctgcccagtgggtcagggttatggcctgacagagacttgt
ggaactgggaccctctgcgagcagtgggattacagcactgggagagtgggagggccgctg
gtttgctgtgagataaagctcagagactgggtggagggtggttaccgtagcaaggacaaa
ccacatcctcgaggagagattcttattggtggatcaaatatatccatgggatacttcaag
aacgaggctaaaagccaagaagacttctttgtagatgagaacagccagcggtggttctgc
acaggagacatcggagagtttcacaaagatgggtgcctcaaaataattgatcgtaagaaa
gacctggtgaagctgcaggcaggagagtacgtctctttgggaaaggtggaggccatgttg
aagaactgccctctggtcgacaacatctgtgcctatgccaacagtgaagaaacatatgtg
attggctttgtggtgcccaatcagaagcatttgctggctctggctgaccagtacagtatt
cgaggctcgtttgaggagctgtgcaacagcaaggccatggaagagctggtcctcaaggtc
atcactggagctgcactggcagcccagcttgagcgttttgagattcctcgcaagatccgt
ctgagcccagacccttggactcctgagacaggattagtgactgacgccttcaagctcaaa
cgcagggagctgaaaacacattaccaggatgacattgagagaatgtatggtgggaaataa
DBGET
integrated database retrieval system
