Lates calcarifer (barramundi perch): 108888207
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Entry
108888207 CDS
T04895
Symbol
pax3b
Name
(RefSeq) paired box protein Pax-3b isoform X1
KO
K09381
paired box protein 3/7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108888207 (pax3b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108888207 (pax3b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_32
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
108888207
NCBI-ProteinID:
XP_018539610
UniProt:
A0A4W6C0E5
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Position
LG21:complement(23377109..23402858)
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AA seq
496 aa
AA seq
DB search
MTALAGSIPRMMRPTLAQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTTPDVEKRIEE
YKRENPGMFSWEIRDKLLKDGICDRNNVPSVSSISRIMRSKFGGKGDEEEDEDEIEKKEL
EDNDRRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SSIPPYQLSESTYPPSSIAQVSEPPSTVHRPQPLPPSSGHQASGAGGQGEGGSAYCLASG
RHSFSGYSDSFVSPGGPANPMNPAIGNGLSPQVMGLLNPGGVPHQPQSDYAISPLTGGLE
PPAGMAASCSQRMDHIKGLEGLTSVPSMSALPSLPSSQSYCPPSYSSPGYTVDHVASYQY
SQYGQSALPYLRPEIT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggcggggtcaatacccaggatgatgcgacccacgctggctcagaattac
ccccgcagcggcttcccactggaagtgtcaacaccgttgggtcaaggccgagtgaaccag
ctcggaggagttttcataaatggcagacctttgcccaaccacatccgacataagatcgtg
gagatggcccaccacggcattaggccgtgtgtcatctcccggcagctccgggtctcccac
ggctgcgtgtccaaaatcctgtgccggtaccaggagacgggctccatcagacccggagcc
atcggaggcagcaaacccaagcagggaacaacaccggacgtggagaagagaattgaagaa
tacaagcgggaaaacccgggtatgtttagctgggagattcgggataaattactgaaggat
gggatatgtgaccgcaacaacgtgccttcagtgagctccatcagtcgcatcatgcgcagc
aaattcggggggaaaggcgatgaggaagaagatgaagatgaaatcgagaagaaagagttg
gaggacaacgaccggagggccaagcacagcattgaaggcatcttaggagacagatcgagt
cactcagacgaaggttcggacgtggagtcagagcctgatctgccactgaagaggaagcag
cggcgtagtcggaccacattcacagcagagcagctggaggagcttgagagggcttttgag
aggacacactaccccgacatctacaccagggaggagctcgcccagagggccaaactcaca
gaggctagggtgcaggtgtggttcagcaacaggcgggcaagatggaggaagcaagcggga
gccaatcaactgatggcatttaatcacctgatcccaggaggtttcccaccatcagccatg
tccagcatccctccgtaccagctctctgagagcacctatcccccctcatctatagcgcaa
gtgtccgagcctcccagcacagtgcatcggccccagcctctgcctccctcctcaggccac
caggcttccggtgcaggaggacagggggagggaggctctgcctactgcctcgcctccgga
cgccactccttctcaggctactcagacagctttgtgagccccggagggccagccaatccc
atgaaccccgccataggaaacgggctctctccacaggtgatgggtctgctgaacccaggt
ggtgtgccacatcagccccaaagcgactacgccatctcacctctgacaggcggcctcgag
ccccctgctggcatggccgccagctgcagccagcgcatggatcacatcaagggcctggag
ggtctgaccagcgttccctccatgtcggctttgccctccctgcccagctcccagtcctac
tgccccccctcctacagctcaccgggctacactgttgaccatgtggcgtcctaccagtac
agccagtacggacaaagtgcccttccttatctgaggcctgaaatcacctga
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integrated database retrieval system
