Lates calcarifer (barramundi perch): 108888221
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Entry
108888221 CDS
T04895
Symbol
si:dkey-33i11.1
Name
(RefSeq) B-cell receptor CD22
KO
K06467
CD22 antigen
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108888221 (si:dkey-33i11.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108888221 (si:dkey-33i11.1)
04090 CD molecules [BR:
lcf04090
]
108888221 (si:dkey-33i11.1)
04091 Lectins [BR:
lcf04091
]
108888221 (si:dkey-33i11.1)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
SIGLEC family
108888221 (si:dkey-33i11.1)
CD molecules [BR:
lcf04090
]
Proteins
108888221 (si:dkey-33i11.1)
Lectins [BR:
lcf04091
]
I-type lectins (Siglecs)
108888221 (si:dkey-33i11.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
V-set
I-set
Ig_CD22
Ig_5
Izumo-Ig
Ig_4
Motif
Other DBs
NCBI-GeneID:
108888221
NCBI-ProteinID:
XP_018539637
UniProt:
A0AAJ7PVD0
LinkDB
All DBs
Position
LG15:27519311..27528706
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AA seq
646 aa
AA seq
DB search
MLAGALVMSTILTALPGIQSRWSVSFSRREICVWAGTTVTLPCRYDYPSGHTVKRVMWFR
VSAEGRREFTHHTDTNQISLSYRGRTRYIGGSYSSCSVQIRGVKLSDAGQYHFRFETDQP
LGRWTSPDTITLDVTDLQVQVHPARPANMFGFGETVFVGCQARGCAAPGRSLALYRTGLN
LGSYEKWMIINRFDLQHAGAYTCRPIPPQNVQSPSLTLALGHGPHSTSIAVFPAGEVSEG
GSVTLTCSSDAAPPVESFAWFKDMESGSIPDSFRPQLRLSQLKYTDRGEYFCVARNSLGT
DRSKPLLLNVTFSPKNTHVLVSPRGDIREGSYVNLSCVSHANPPASRYAWYRILGDQVLA
KGTFQNLTFASVRAHHAGQYYCTTSNPLGYQTSPVATLTVLYPPKNTSVLARPSSVVDAG
RPLTLTCSSQANPAVDNFTWHRLALDGGSVQSWGTKSGPVFTFSEVGPGESGQYYCEARN
RIGAHSSPVLTVRVRGRLKVIALASAVGVSAGLITLTVAIMISKNMHRVDMESVEVANKR
PSVTADTIFYESAQQTLPVRKGKMSDIPEEPEDLSDSSHPSIVPLKDAPPVTEVETCKPA
PNYITVHYSKLSSSDQVQVHSLPLGGDKKPKDSSKVVYTLLPQPRH
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaggtgcattagttatgagcaccatcctcacagctttaccaggtatccagagc
aggtggagtgtgtcattttcaaggagggagatctgtgtatgggcaggaacaactgtcact
ctgccctgccgttatgactacccatcaggccacactgtgaagcgagtcatgtggttccgt
gtgtctgcggaaggtcgcagggagttcacccaccacaccgacacaaaccagatcagcctg
tcataccgcggacgcacacgctacatcgggggcagctactccagttgttcagtccagatt
cggggtgtgaagctcagtgatgcgggtcagtatcacttcaggtttgagacagaccagcca
ctgggcagatggacctcccctgacaccatcactctcgatgtgacagacctgcaggtccag
gtgcatccagccaggcccgccaacatgtttggcttcggagagacagtgtttgtcggctgc
caggccagaggatgtgctgctccaggaaggagccttgcactctacaggactggactaaac
cttggctcttatgagaaatggatgatcatcaacagatttgacctgcaacatgctggagca
tacacctgtcgaccaataccaccacagaatgtacagtctccatccctcaccctggccctg
ggacatggtcctcactccacctctatagcagtctttcctgcaggggaggtgtctgagggg
gggtcggtcactctcacctgcagtagtgatgcagctccgcctgtggagagctttgcatgg
tttaaagacatggagagtggcagcatcccagacagtttcaggcctcagctccgtctgtcc
cagctcaaatatacagacagaggagagtacttctgtgtagctcgtaactcactgggaaca
gaccgctccaaaccactgctgctcaatgtcactttctctccaaagaacacacatgtgctg
gtgagtcctcgaggtgacatcagagaaggttcatatgtaaacctgagctgtgtgagccac
gccaaccctcctgctagcaggtacgcttggtatcgtatccttggtgatcaggtgttagct
aaaggaacatttcagaacctgacattcgcatcagtgcgtgctcaccacgctggtcagtac
tactgcacaacatcgaaccctttaggataccaaacctcccctgttgcgactctcactgta
ctctatcctcctaagaacacttcagttctggctcgtccctccagtgtggtggacgctggc
cgaccgctgactttgacctgcagcagtcaggccaacccagcagtggacaacttcacatgg
catcgcttagctctggacgggggctctgtacaatcatggggaaccaagtcaggtcccgtt
ttcaccttctcagaggtcggccccggagagagcggtcagtactactgtgaggccaggaat
cgaatcggagcccacagctctcctgtcctcactgtccgagtcagaggtcgtcttaaagtc
attgccttggcatcagctgtgggtgtgtctgctggactcatcactctcactgtggccatt
atgatcagtaagaacatgcacagagtggacatggagtcagtggaagtagcaaacaagcgt
ccatcagtgacagctgacaccatcttctatgagtcagcccaacagactctcccagtgaga
aagggcaagatgtccgacataccggaagagccagaggacttaagtgacagctcccacccc
tccattgttcctctaaaggatgctccaccagtcacagaagttgaaacctgcaagcccgcc
cctaattacatcaccgtccactactccaagttgtccagttctgaccaggtgcaggtccac
agcctgccactaggtggtgataaaaaaccaaaggactcctccaaagttgtttacacctta
ctgccccagcctcgccactga
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