Lates calcarifer (barramundi perch): 108888295
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Entry
108888295 CDS
T04895
Name
(RefSeq) suppressor of fused homolog isoform X1
KO
K06229
suppressor of fused
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108888295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108888295
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108888295
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SUFU_C
SUFU
Motif
Other DBs
NCBI-GeneID:
108888295
NCBI-ProteinID:
XP_018539748
UniProt:
A0AAJ7PVK0
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Position
LG16_LG22:7620505..7629395
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AA seq
471 aa
AA seq
DB search
MDEVRPTSGAQAHGLVPLFPPGLQAIYGECRRLYPEQANPLQVTAIVKYWLGGPDPLDYI
SMYRNMGCQAQDIQEHWHYVSFGLTDLYGDNRVHEFTGADGPSGFGFELTFRLKREVGET
APPTWPAELMQGLARYVFQSENTFCSGDHVSWHNPLDNSESRIQHMLLTEDPQMQPIQTP
FGTVSFLQIVGVCTEELQAAQQWNGQGILELMRGVRVAGGPWLITDMRRGETIFDIDPHL
QQERVDQGIETEGSNLSGVSAKCVWDDLSRPPEDEEDSRSICIGSQPRRLSDKDTEQIRE
TLRKGLEFNSKAALPPINSQRQSHERPQSRKDSLESESSAAIVPHELVRTRQLESVHLKF
NQESGTLLPLCLRGRLLHGRHFTYKSINGDTAITFVSTGVEGAFATEEHPYAAHGPWLQI
LLTEEFVEQMLGDLQELNTREETKLPKEYSWPEKKLKISVLPDSVFDNPLQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggtacggcctaccagtggtgctcaagcccacgggctggtgccgctgtttcct
cccggactgcaggctatctacggggaatgccggcgactttaccccgagcaagccaacccg
cttcaagtaacagccattgtaaaatactggttagggggaccagatccattagactacatc
agtatgtataggaatatgggctgtcaagctcaggacatccaggagcattggcactatgtc
agttttggactgactgacctgtatggggataatagggttcacgaattcacaggggcagat
ggacctagtgggtttggctttgagctcacctttagactcaaaagagaggtgggagagact
gcaccaccaacctggccagctgaacttatgcaaggcttggctcgctatgtgttccagtca
gaaaacacattttgtagtggcgaccatgtatcgtggcacaatccactagacaacagtgaa
tctcgtatccagcatatgttgcttacagaggacccacagatgcaaccaattcaaacgcca
tttggcacagtgagctttctccagattgtgggtgtatgtacggaggagctacaggctgcc
caacagtggaacggccaaggcatcctggagctgatgcgtggagtcagagtagctggtggc
ccctggctcatcacagacatgaggagaggggaaaccatttttgacattgatccacaccta
caacaggagagagtggaccagggtattgagacagagggctctaacctgagtggtgtcagt
gccaagtgtgtgtgggatgatctgagtcgaccacccgaggatgaggaggacagccgatcc
atctgtataggatcacagccacgcaggctctcagacaaagacacagagcagatcagggag
accctgagaaaaggactggaatttaacagcaaggcagcactaccacccatcaacagccag
agacagagccatgagagacctcagagtcggaaggacagtttggagagtgagagttcagca
gccattgttccacatgagttggtccgaacacgtcagttggagagtgtccatctgaaattc
aaccaagaatcaggcacgctgctgcccctctgcttacggggccggttgctacacgggaga
catttcacatacaaaagtatcaatggagacacagccattacatttgtgtctacaggagtt
gaaggagcttttgctactgaagagcatccatatgcagcccatggcccctggcttcagata
ttgttgactgaggagtttgtggagcaaatgcttggggatttacaggaacttaatactcgt
gaagagacaaagttaccaaaggagtacagttggccagaaaagaagctgaagatctctgtc
ctaccagactctgtgtttgacaatccactgcagtga
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