Lates calcarifer (barramundi perch): 108888322
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Entry
108888322 CDS
T04895
Symbol
ccka
Name
(RefSeq) cholecystokinin
KO
K05226
cholecystokinin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108888322 (ccka)
04081 Hormone signaling
108888322 (ccka)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108888322 (ccka)
Cytokines and neuropeptides [BR:
lcf04052
]
Neuropeptides
GPCR binding
108888322 (ccka)
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Gene cluster
GFIT
Motif
Pfam:
Gastrin
Motif
Other DBs
NCBI-GeneID:
108888322
NCBI-ProteinID:
XP_018539801
UniProt:
A0A4W6EDT5
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Position
LG15:27362963..27368160
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AA seq
204 aa
AA seq
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MFAFSVASVASVSAPAAGSSPLSRPLLLPVCQYKTWCALSHILTHSLYTGGAKLNIFRLI
LSWSTPTTAVMNIGICVCVLLAALSSGSLSLPTQSMSQRAEGEALMSDILPPPSPNHTRQ
ARSAPAPPSGQLANYNPQEDADARYSLSQLLARLISRKGSPYQTRSSLTSRASGLAPGHR
IKDRDYLGWMDFGRRSAEEYEYSS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgttctcagttgcgtcagtggcatcagtttctgcgccagcagcaggctcctcc
cctctgtccagacccctcctccttcctgtgtgtcagtataaaacatggtgtgctctctct
cacatactcactcacagcctctacactggaggagcgaagctcaacatcttcagactcatc
ctctcctggtccacgccaacaactgcagtcatgaacataggtatctgtgtgtgtgttctc
ctggctgctctgtccagcggttccctgagtctgcccacacagtccatgtcacagagagct
gagggtgaggctctcatgtcagacattctacctcccccctcacccaaccacacacgccaa
gctcgctcagctccagcgcccccctcagggcagctcgccaactacaacccacaggaggac
gcagatgctcgatacagcctgagccagctattggccagactcatctccaggaaaggctct
ccctaccagaccagatcctccctcactagcagagccagtggtctagccccaggccacagg
ataaaggacagagattatcttggctggatggactttggaagacgcagcgcagaggagtat
gaatactcctcctaa
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