Lates calcarifer (barramundi perch): 108888343
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Entry
108888343 CDS
T04895
Symbol
ptprz1b
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108888343 (ptprz1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108888343 (ptprz1b)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcf00535
]
108888343 (ptprz1b)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108888343 (ptprz1b)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108888343 (ptprz1b)
Proteoglycans [BR:
lcf00535
]
Cell surface proteoglycans
Others
108888343 (ptprz1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
PTP-NADK
PTPlike_phytase
Y_phosphatase3
GUN4_N
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
108888343
NCBI-ProteinID:
XP_018539820
UniProt:
A0AAJ7V7V9
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All DBs
Position
LG18:complement(14884750..14943259)
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AA seq
1965 aa
AA seq
DB search
METAVPRTDMIISQLLLLSQIVVAAEPLVRGLKKLPEDIDWSYSGTLNQRNWGKKYPSCT
SARQSPVDIDETFTQVRLQYQNLQLEGWDKLTAESSTIHNNGKTVAINVEGEFYVSGGGL
SSRFRVGRITFHWGRCNATSDGSEHSLNGMKYPLEMQIYCYDPDDSQRLDDAIREGGRVS
ALAVLFEISLEDNENLIPVIDAVNTVSRFGKSGSLEAFTLRSLLPNNTDKYYIYNGSLTA
PPCTEMVEWIVFKNTVAISETQLEVFCEVMTMEQAGYVMLTDYLQNNFREQQQQFMGQVF
ASYTGVEDVLTPTCSSEPENVQADAQNDTTIVVTWERPRVVYDTTIDWYTVTYQRLQGRD
QSKQEYRTDGDQDVGAIIPSLLANSSYVVQVVAVCTNGLRGRWSDQIIVDMPLEDPESDS
DSDTVTKDLEGYRQVLSKGRWGRPENQNQVDLSLEDHSPVEEIPVEQTRVYQNQPTHHQN
QPRDQTQANQNIPVQVSPHSTPKTPSDSAVLQKTQLNQSVKKKPGRNKSKPDDMDQNWID
EDRRIPTNRPITNAGFDSNGAIWVTETTERPGFLFPVARTTTLPIIHRQMTEEASLSVLP
HQSGDTPDQAGESGVPSPQSDLNTPPVEDIQVTDIFYEDTVNNFPLETTISTATQSAAVV
VPGNKVDRVPPLSPEDSDAPVNKPPPETITSVSSSLWITARTATASNTLANSVYKSFTTS
SLLKVLMHTTQPMFNANTPRSEDSTVDLSSGLTNSAAVSVPKRLFSLSPPSLNPINEYPS
SFSPSLALPEDERSGVNFHHNDKSSEEHSIVHLEMDLERPQISTTLGSQNHLSTEYSLPL
LSDYDLSPINLSKTSSVENALNRNAPHSQSDIRIQDRLNILPHPNNEEELRMTGRNDNHN
SLFDSKDLDLSDGSTGDSGSGSGLDGNGLNQDFDEVATIKTDLSTFASLTVSFKVDDTRE
KSRSTATKMATETNKDIDRARSNKGGTKQWETAAEKEIAENDSELSHEEEEKIGGEGLNE
TVNEVVWKMDRETEDSARWLSSIAGCDMLKEKERETEGETVGKTENDTENGSGIESVRVF
SWPEDVSGSGEGGGDGGENDKEKGKITSDGKEDIKALAEKESDSKGNGRKDSNKDAVLGG
RDGLQLSVSQNKPKAEFPLFDSSEENSNGDGHDEEDENKSLDRSLKDNWEGDGDGKLKVG
MESVEHIEEGGTEDSDAVVIGESLQQFSSVDRLLFDAARSPVLGRIVPLLRLTDANKAME
EQMEEGSNSSHESRVGLVGGVEREKRTVVPLAVVSTLTILCLLVLVGILIYWRNCFQAAN
FYPDDSASPKVISAPSTPLLLATDGHEPLTVKQFVKHVMELHTTNTFYKEFEIVKESYEE
VQACTVDMGITADSSNHPDNKSKNRYINILAYDHSRVKLSNSLDRDGKCGDYINANFVDG
YERTRAYIAAQGPLRAGREDFWRMIWQQNVGVIVMITNLKEKGRTKCDQYWPDENQEEYG
PYQVTLKSSKTLAYYTLRTFTVRDTTNKVSQRRVEHTVLHYHYTQWPDMGVPEYTLPVLS
FIRASSRARTQEMGPVLVHCSAGVGRTGTYIVIDSMLQQIQDQGTVNVLGFLKHVRTQRN
FLVQTEEQYVFIHDALVEAILSRDTSVTSDLLHTYVSDLLTPGASGRTRMDKQFKLISQR
QAKHADYSTALKDGNAERNRARALMPVERSRVCLTASESNSTGYINASYVMGHHHSKEFI
VSQTPLSSTVADFWRMIWEHNTHTVVRLPDTHCQGEEGECCVCWPSRDQPMNFEGFTVSY
SGEEHVCLSNDERLLVQDFTVESPQNNYVLEVRQYSAPCWPNPDSPIRNSFDLVNTVREH
SRHTDGPMVVHDPLGGATSGLFCALTTLSSLLEEEGAVDVYQVARMTNLMRPGVFNDIEQ
YQYLYRAVLSLVSSQEDQRALQSPETNGSVPLGQTNIAESLESLM
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcagttcccaggaccgatatgataatttcccagctgctccttttgagccaa
atagttgtggcagcagagccgctggtccgaggtctgaagaaactcccagaggacatcgac
tggtcgtactcaggtaccctgaaccagcgtaactggggtaagaagtacccgtcctgtacc
agtgccaggcagtctcccgtggacattgacgaaacgttcacccaggttaggctgcagtac
caaaacctgcaactagaagggtgggacaagcttacagcagagtccagcaccatccacaac
aatgggaagactgtggccatcaatgtggaaggagagttctatgtgagtggaggaggtctg
agctccaggtttcgtgttggtagaatcaccttccactggggccgctgcaacgcaacatca
gatgggtctgaacacagcctgaatggaatgaaataccctctggagatgcagatctactgt
tacgatccagatgactctcaaaggctggatgatgctatcagggaaggaggaagggtctct
gctttggctgtactctttgagatcagcctggaagacaacgagaacttaattcctgttatc
gatgcagtcaacactgtcagcaggtttggtaagagtgggtcattggaagccttcacctta
cggtccctgctgcctaataacacagataaatattacatctacaatggttctctgactgcc
cctccctgcactgaaatggtggagtggattgtctttaaaaacactgtggccatatcagaa
acacagttggaggtgttctgtgaagtgatgaccatggagcaggctggttatgtgatgctg
acggattacctgcaaaacaacttcagggagcagcagcaacaattcatgggtcaggtgttt
gcctcgtacaccggggtggaggacgtgctcacacccacctgcagctcggagccagagaac
gttcaggctgatgcccagaacgacaccaccatcgtggtgacgtgggagcgtccccgcgtg
gtttacgacaccaccatcgactggtacactgtcacctaccagaggctgcagggccgagac
cagagcaagcaggagtacaggaccgatggggaccaggatgtgggtgccatcattcccagc
ctgctggccaacagcagctatgtagttcaggtggtggctgtttgcaccaatggactcaga
ggacgatggagcgaccagattatagtggacatgccgttagaagatcctgaaagtgattca
gattctgacactgtcacaaaagacttggagggttacaggcaggtcttatctaaaggcaga
tgggggaggcctgagaaccaaaatcaggtggatttgtctctggaggaccacagccctgtt
gaagagatcccagtagagcagaccagagtttaccagaaccagcctacacaccaccagaac
cagccgagagaccaaacccaagcaaaccagaacatcccagtccaggtcagcccccattcg
accccaaagactccctccgactctgcagttctccagaaaactcaactcaaccagagcgtg
aaaaagaaaccgggccgaaacaagtctaaaccagatgatatggatcagaactggattgat
gaggacaggaggatcccaaccaaccggcccattactaatgcaggttttgacagcaatggt
gcaatctgggtaactgagacaactgaacggccgggcttcctgtttccagttgctcggacc
accacactgccaattatccacagacaaatgactgaggaggcatcattgtcagttttgcca
catcagtcaggagatacaccagaccaagctggtgaaagtggcgtgccctctcctcagtcg
gacctcaacacacctcctgtggaggacatccaggtcacagatatcttctatgaagacaca
gtcaacaactttccactggaaaccaccatctccactgcaacacagtctgctgctgttgtg
gtgccaggtaataaagtggacagagtccccccactgtcccctgaagacagcgatgcccca
gtgaacaaacctccaccagaaaccatcacgtcagtttcctcctccctctggatcaccgca
aggactgcaactgccagcaacaccctcgccaattcagtctacaaatcattcaccacctca
tctcttctcaaggtgctgatgcatacaacccagcccatgttcaatgcaaacacacccagg
tctgaggactcaaccgttgacctctcctctggcttaacaaactctgctgcagtctctgtc
ccaaaaagattattcagtttgtcacctccatcactcaaccccatcaatgaataccccagc
agtttcagtccttctcttgccctccctgaagatgagaggagtggtgttaactttcatcac
aatgacaagtcctctgaggagcactctattgtccatctagaaatggatttagaacgccct
cagatttctaccactttgggttctcaaaatcacttaagcactgagtactctcttcctctt
ctgtctgattatgacttgagtcccatcaacttatcaaaaacaagctctgttgaaaatgct
ttaaatagaaatgctcctcattctcaaagtgacattaggattcaagatagactgaacatc
ttgccacatcccaacaatgaagaggaactgaggatgactggacgtaatgacaaccacaac
tctctctttgattctaaagatttggatctttcagacggatcaacaggggacagtggatca
ggctctggccttgatggtaatgggctcaatcaagactttgatgaagtggctacaatcaag
actgacctttctacttttgcaagcttaactgttagcttcaaggtggatgatactagggaa
aagagtagatcaactgcaactaagatggcaactgaaacaaataaggatatagatagggca
agaagtaataaaggtggcacaaaacagtgggaaacagcagcagagaaagagatagcagag
aatgatagtgagctaagtcatgaggaagaagaaaagattggaggagaaggactaaatgag
actgtgaatgaggtagtgtggaaaatggatagagaaacagaggatagtgccagatggctc
agtagcatagcaggatgtgacatgctgaaagaaaaagagagagaaactgaaggtgaaact
gtaggaaagactgagaatgacactgagaacggcagtggaattgaaagcgttagagttttt
agctggcctgaagatgtcagtggttctggagagggtggtggagatggaggggaaaatgat
aaagaaaaaggaaagataaccagtgatggtaaggaggatatcaaagctctagctgaaaag
gaaagtgatagtaaaggcaatggaagaaaagacagcaacaaagatgctgtacttggaggg
agagatggtctgcagctgtctgtcagtcaaaataaacccaaagcagagttcccactgttt
gacagcagtgaagaaaatagcaatggtgatggacatgatgaagaagatgaaaataaaagt
cttgacaggtctctcaaggacaactgggagggagatggtgatggtaaactaaaagtagga
atggagagtgtggaacatattgaagaaggtggtacagaggatagtgatgcagttgtaatt
ggagaaagtttgcagcagttctcaagtgtggacagactgttgtttgatgctgcaagaagt
cctgttttggggcgtatagtccctctgctcagactgacagatgccaacaaggcaatggag
gagcaaatggaagagggcagcaacagcagccacgagtctcgggtcgggctggtcggaggc
gtggagagggagaagaggacagtcgttcctctggctgtcgtctccactctcaccatcctc
tgtctgttggtactggtgggcatactcatctactggagaaactgttttcaggcagcaaat
ttctacccagatgacagtgcatcacctaaagtcatatctgctccgtctacacccctgctg
ctggccacagacggtcatgagccgctgacagtgaagcagtttgtgaagcatgtcatggag
ctgcacaccaccaacaccttctacaaggagtttgagattgtcaaagaatcctatgaggag
gtgcaagcgtgtacagtggacatgggtatcaccgctgacagctccaatcaccctgacaac
aaaagcaagaaccgctacatcaacatattagcctatgaccatagcagagtgaagctctcc
aacagcttggacagagatgggaaatgtggggactatatcaacgctaactttgttgatggt
tatgagcgaacaagggcgtacatcgcagctcagggtcctctcagagcgggcagggaagac
ttttggaggatgatctggcagcagaatgtcggagtcatcgtcatgatcaccaacctcaag
gagaaaggacggacaaagtgcgaccagtactggccagacgagaaccaggaggaatacggt
ccataccaggtgaccctgaaaagcagcaagaccctggcttactacacattgcggacgttc
actgtcagagacaccacaaataaggtgtctcagagaagggttgaacacacagtcctccat
taccactacacccagtggccagacatgggtgtcccagaatacactctgcccgtcctgtcc
ttcatcagagcatcctcccgggcccggacacaggagatgggacctgtcctggtacactgc
agtgctggtgtaggacggacaggaacatacatagtgatagacagcatgctgcagcagatc
caggatcaggggacagtgaacgttctcggtttcctaaaacatgtgcggactcagaggaac
ttcctggttcagacagaggagcagtacgtgttcatccatgacgctctggtggaggccatc
ttgagccgtgatacctctgtgacctctgacctcctccacacctatgtgtctgacctcctg
acccctggggcgtcaggcaggacacgcatggacaaacagttcaagttgatcagtcagcgc
caggcgaagcacgcagactacagcactgccctgaaagatggcaacgctgagaggaacaga
gccagagctctgatgcctgtggagaggtcaagagtttgtctgactgcttcagaatcaaac
tccacaggctacatcaacgcctcgtacgtcatgggacatcaccacagtaaggagttcata
gtgagccagactcctctgagcagcactgtggctgatttctggagaatgatctgggagcac
aacacacacactgtcgttcgtctgccagacacacactgtcagggtgaagagggggagtgt
tgcgtctgctggcccagtagagaccaaccaatgaactttgagggtttcactgtgtcctac
tcgggggaggagcatgtgtgtctgtccaatgatgagagacttttggtgcaggactttaca
gtggagtctccacagaacaattatgtgttggaggtgcgtcagtacagcgcaccctgctgg
ccaaacccagacagtcccatcaggaacagttttgatctggtcaacacagtcagggagcac
agcagacacacagacggacctatggtcgtacatgatccgttgggaggtgctacatcaggg
ctgttctgtgctctcaccaccctgtccagcctactagaggaggagggagctgtagacgtc
taccaggtggcacggatgaccaaccttatgaggcctggggtgtttaatgatatagagcag
taccagtatctgtaccgagccgtgctcagtctggtgagcagccaggaggaccagagagcc
ctgcagagtccagaaaccaacggatctgtaccactggggcagaccaacatcgcagagagc
ctggagtcactcatgtag
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