Lates calcarifer (barramundi perch): 108888379
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Entry
108888379 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-20-like
KO
K06087
claudin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03272
Virion - Hepatitis viruses
lcf04382
Cornified envelope formation
lcf04514
Cell adhesion molecule (CAM) interaction
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108888379
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108888379
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108888379
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108888379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108888379
04147 Exosome [BR:
lcf04147
]
108888379
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108888379
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108888379
Exosomal proteins of colorectal cancer cells
108888379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
108888379
NCBI-ProteinID:
XP_018539883
UniProt:
A0AAJ7V7X5
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MLSAAIQILAFALALLGVLGATVATLLPNWKVSTNVWSSIMTPISQMQGLWMDCVWYSSG
VFSCTMKNSMLSLPAYLQTTRAAMVLSCMVATFGLCLASLGLKCTRWGGSHRAKGXTAIA
AGGCFILASFLCLVPASWFTNEVITAFLTTDLPESSKYQPGGALCVTFISAGFLLAGGVI
FCLSCPGKRTRRPDYASSANPDRPVLYRDEQQRRELQTERDQPKKRQNKTVQLQMDEVKQ
EKALKEKPEQDQEQRLYSSPSKLPPKDIKDSYSLQEYV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccgccgccattcagattctggcgttcgcccttgcgctcctgggcgtcctcggc
gccaccgtagccaccctgctacccaactggaaggtgagcaccaacgtgtggtccagcatc
atgacccccatctctcagatgcagggtctgtggatggactgtgtgtggtacagctccggc
gtcttcagctgcaccatgaagaactcgatgctgtcactgccggcatatctgcagaccaca
cgagccgccatggtcctgtcctgcatggtggcgacgtttggactctgcctcgcctccctg
gggctcaaatgtacccgctgggggggcagccaccgagcaaagggcnatacggccattgct
gcaggaggctgcttcatcctggccagttttctctgcctggtcccggcgtcctggttcacc
aacgaagtcatcaccgccttcctgacaacggacctgccagagagcagtaaatatcagcct
ggaggagctctgtgtgtgacgtttatctccgctggattccttctggctggaggggtcatt
ttttgtttgtcgtgtcccggaaagagaacgagacgaccggactacgcttcctccgccaac
cctgacagaccggtgctgtaccgagatgaacagcagaggcgggagctgcagaccgagcgt
gaccagccaaaaaaaagacaaaacaaaactgtccagctgcagatggacgaggtgaagcag
gagaaggctctgaaggagaaacctgaacaggatcaggagcagagactctactcgtctccg
tccaaactccctccaaaagacatcaaggacagctacagcctccaggagtatgtttaa
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