Lates calcarifer (barramundi perch): 108888406
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Entry
108888406 CDS
T04895
Name
(RefSeq) solute carrier organic anion transporter family member 1C1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108888406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108888406
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
108888406
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GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Sugar_tr
Motif
Other DBs
NCBI-GeneID:
108888406
NCBI-ProteinID:
XP_018539909
UniProt:
A0A4W6D329
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Position
LG21:complement(9976872..10006991)
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AA seq
702 aa
AA seq
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MEERAGQGRTQENGRSDGAATEPRSTPCTSLKMFLVALSFAYFAKALSGSYMKSTITQLE
RRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIAMGCVLMSIGTFIIALPHF
IIGRYEYETSVRWVVNSTLNPSPCPVGSLADLTQDGKLPEVPAAGCESESNLSMWIYVLL
GNVLRGIGETPVQPLGISYIDDFATEENAALYVGCVQTISVVGPVFGYLLGSLCAKIYVD
IGFVKMETITITPADARWVGAWWLGYLIAGVITLLSAIPFWFLPRSLPMSGPRGPEKCTP
EQTSFIKDSPLMKHKYPADEHTSFIEMAKDFIPTLRTLLGHPVYLIYLCVTIIQLNSLIG
MVTYKPKYIEQHFRQSASKANFLMGMINIPAVALGMFSGGLLMKRLKLNIMGAARFAFGT
SLIGYILSLFFFAMSCENAKVAGVTLSYNSMDTISYEKHPVFTACNSDCFCSASDWDPVC
GENGITYVSPCLAGCTSSAGSGKNTVFSNCSCVGAAGNFTASTGQCPQKDDCDRMFPYFL
ALSVITSFIISLGGTPGYMLLIRCIKPQLKSLALGFHALATRTLAGIPAPIYFGAIIDTT
CLKWGQKRCGGIGACRIYNTTAYRIAYLGLTLSLRTVSFVICIPGFILLSRQLKKEERNA
IHGALSNGGAELEALRKEEFVISNSDQLQQTSDNSTDRETRL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagagctgggcaaggacgtacacaagagaacggacgcagtgacggtgcggcc
acagagccgcgctccactccctgcaccagcctgaagatgtttctggtggctctgtccttt
gcctattttgcaaaggctctgtcagggagctacatgaagagcacaataactcagctggag
aggcgctttgacatccccagttacctaataggtgtcattgacgggagcttcgagataggt
aacctcttggtgatagctttcgtcagttactttggggccaagctccatcggccaaagatc
attgcaatgggttgtgtgctgatgtccatcggcaccttcatcatcgctctgcctcacttc
atcattgggcgctatgaatatgaaacatcagtgcggtgggtagtgaattcaacacttaac
ccctcaccatgtccggtgggatcactggctgacctgacccaagatggtaaactgcctgaa
gtgccagccgcaggttgtgaaagcgagtctaacttgtcgatgtggatctatgtgctcttg
ggaaatgtcctgcggggaatcggagagacgccagttcagcctcttgggatctcgtatata
gatgattttgctactgaggagaacgctgcgctatatgtgggctgtgtgcagaccatctct
gtagttggccctgtgtttggctacttattaggctccctttgtgccaaaatctatgtggac
attggatttgtaaaaatggaaaccatcacaatcaccccagcagatgcccgctgggtgggg
gcctggtggctgggctacctcatagctggggtcatcaccctgctctctgccatcccattc
tggtttctgccccgctccctgcccatgtctgggccccggggcccggagaagtgcacgcca
gagcagacaagtttcatcaaagactccccccttatgaagcacaagtatcccgcagacgaa
cacactagttttatagagatggccaaagactttattccaaccctgcgaactctgctggga
caccctgtgtatctgatctacctgtgtgtgacaatcatccagctgaactctctcatcggc
atggtcacctacaagcccaaatacatcgagcagcacttcaggcaatctgcatcaaaggcc
aactttctgatgggcatgatcaatatccccgctgtggccctggggatgttttctggaggt
ctgctgatgaaaagactgaagctgaacatcatgggagcagccaggtttgcctttggcacg
tctctgatcggttacatcctgtcactgttctttttcgcaatgagctgcgagaatgccaag
gtagccggggtaacactgtcatacaacagcatggatacaatatcctatgaaaaacatcca
gtgttcacagcctgcaactcagactgcttttgttcagcgagtgactgggatccagtctgt
ggagagaatggcatcacatatgtttctccctgtcttgctggctgcaccagctctgctggc
tcagggaaaaacacagtcttctctaactgtagctgtgtcggtgcggctggtaactttacg
gccagtacaggtcagtgtcctcagaaggacgactgtgacaggatgttcccgtacttcctg
gctctctctgtcatcacttcctttatcatctccctcggggggacaccaggctacatgctt
ctcatcaggtgcataaaaccacagctgaaatctctggccttgggattccatgctctggca
acacgaaccctcgcggggatcccggcacctatctactttggagcaatcattgacaccaca
tgtctaaaatggggtcagaagaggtgtggaggcataggagcctgtcgaatctacaacacc
actgcatacaggattgcatacctgggcctgaccctgagcctgcggactgtctcattcgtt
atttgcatcccgggcttcattctgcttagtcgacagctgaagaaggaggaaagaaacgcc
attcacggagctctgtccaatggcggagcagagctcgaggcactcaggaaggaagagttt
gtgatttcgaattccgaccaattacaacaaacgtcagataacagcacagacagggagaca
cggctgtga
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