Lates calcarifer (barramundi perch): 108888411
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Entry
108888411 CDS
T04895
Symbol
zgc:114130
Name
(RefSeq) mRNA decay activator protein ZFP36L1
KO
K18753
butyrate response factor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108888411 (zgc:114130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108888411 (zgc:114130)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108888411 (zgc:114130)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_DUS3L
zf_CCCH_4
zf-CCCH_UNK
zf-CCCH_4
zf-CCCH_2
zf-CCCH_UNK-like_4th
zf-CCCH_9
zf-CCCH_PAN3
Torus
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
108888411
NCBI-ProteinID:
XP_018539913
UniProt:
A0A4W6D2A2
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Position
LG21:complement(9465256..9470251)
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AA seq
433 aa
AA seq
DB search
MPSYPKLNQFADLEEMMCKQLLNLGLREPNRPLPPISLAMRTPGYIGQPRSSTSFSLSSL
SNLPTDPSDNVFLTSSQWGQQSESPLPSQLVNSSQWGKSGFLAQRSISMVETSSTTAASL
GWPGTDVKYSQCDISPTALNTSSSSSTSSVSTSSSSSRYKTELCRSFTENGLCKYGGKCQ
FAHGPEELRDLNRHPKYKTEPCRTFHTIGFCPYGIRCHFVHNNEEEKKYSFSRSSSSSSS
SSSIPQQLPCSSRTHKPPLVRQSFSFAGFPSAPQQGLQHALTATSSFTPAPSASPPSCAD
ITDLLSHAFLEMDSAFEASPAHQYPPPVGQATAADSRSPFLPSPDSGCSPCGLSPTGSPS
LRQSPSATGVFSGPLGARSLSYTSLSDQDQDGGSSASSLSGSESCSGISESNGRRLAVFS
QLSVPEDATGFCL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgtaccctaaactcaaccagtttgctgacctggaagagatgatgtgcaagcag
ttactcaatcttggcctgagggagccaaacagaccactgccacccatcagtctggcaatg
agaacaccaggttacatcggtcagccacgtagcagcacatcattttccctctcgtctctc
tccaacctccccactgatccttcagacaatgtatttctgacctccagccagtgggggcag
cagtcagaaagcccactgccctcccagcttgttaattcctcccagtggggaaagtcaggc
tttcttgcccagcgctcaatcagcatggtagagaccagcagcaccacagcggcaagtcta
ggctggcccgggactgacgtaaagtactcccaatgtgacatcagtcccactgcactgaac
actagctcctcctcatcaacttcatctgtttccacgtcctcttcctcatcccgttataag
actgaactgtgtcgatctttcactgagaacgggttgtgcaagtatggtgggaagtgccaa
tttgcccacgggccagaggagttgcgggatcttaacaggcatccgaaatacaaaactgag
ccgtgtcgcacatttcacaccatcggcttctgcccctacgggatccgctgccactttgtc
cacaacaacgaggaagaaaaaaagtattccttctctcgttcctcctcgtcctcttcctcc
tcctccagcattccccagcagctgccttgctcctcccgcactcacaaacctcctcttgtc
agacagagcttcagctttgctgggtttccctctgctcctcagcaaggccttcagcacgcc
cttaccgccacctcttctttcacacctgctccctctgcatctcctccttcctgcgctgac
atcactgacctcctttctcatgccttcctggagatggactctgcctttgaggcctctccg
gcccatcagtacccaccccccgtgggccaggccactgcagcagattcccggtctccgttc
ttgccttctccagactccggctgctctccatgtgggctctcgccgactggctccccttcc
ttgaggcagagtcccagtgccactggggtcttttcggggccactgggtgcccgatccctg
tcctacacttctctgtcagaccaggaccaagacggaggcagctctgctagctcgctcagc
ggctcagaatcctgcagtggcattagcgaaagcaatggcaggcgtctggcggtattcagt
cagctctctgttcctgaggatgctactgggttctgcctttag
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