Lates calcarifer (barramundi perch): 108888447
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Entry
108888447 CDS
T04895
Symbol
si:dkey-28b4.8
Name
(RefSeq) LOW QUALITY PROTEIN: sarcoplasmic/endoplasmic reticulum calcium ATPase 2
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04148
Efferocytosis
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108888447 (si:dkey-28b4.8)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108888447 (si:dkey-28b4.8)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108888447 (si:dkey-28b4.8)
04261 Adrenergic signaling in cardiomyocytes
108888447 (si:dkey-28b4.8)
Enzymes [BR:
lcf01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
108888447 (si:dkey-28b4.8)
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GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
Motif
Other DBs
NCBI-GeneID:
108888447
NCBI-ProteinID:
XP_050926516
UniProt:
A0AAJ8DPP0
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Position
LG5:9718825..9743824
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AA seq
1065 aa
AA seq
DB search
MDNAHTKTVEEVLGFFCVNESTGLSCEQLKKNRERWGPNELPAEEGKSLWELVLEQFEDL
LVRILLLAACISFTLAWFEEGEGTITAFVEPFVILLILIANAIVGVWQERNAENAIEALK
EYEPEMGKVYRQDKKSVQRVRARDIVPGDIVEVAVGDKVPADIRLTSIRSTTLRVDQSIL
TGESVSVLKHTDPVPDPRAVNQDKKNMLFSGTNIAAGRAIGVVVATGVQTEIGKIRDEMA
STDPERTPLQQKLDQFGEQLSKVISVICVAVWAINVGHFNDPVHGGSWLRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMARKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFVVDSVSGEHCSLSEFTVTGSTYAPEGEVYKDGSVVKCSQYEGLVEMASICALC
NDSSLDYNEAKGVYEKVGEATETALCCLVEKMNVFDTNLRGLSPAERATACCSVIKQLMR
KELTLEFSRDRKSMSVFCSSNKLTRSASGAKMFVKGAPESVLERCTYIRVSGSARVPLSP
VVREQLLSTVREWGSGRDTLRCLAMATRDTPPDIHCLNLENSAAFADYESDLTFVGCVGM
LDPPRKEVLGAVRMCRQAGIRVIMITGDNKGTALSICRRVGIITEQEEEQEGAGVIGGLT
GREFDELPPHLQRQACRTARCFARVEPAHKSRIVEYLQSLSDITAMTGDGVNDAPALKKA
EIGIAMGSGTAVAKSASEMILADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVC
IFLTAALGMPEALIPVQLLWVNLVTDGFPATALGFNPPDLDIMSRPPRSPKEPLISSWLF
CRYLIIGCYVGAATVGAAAWWFMAAHDGPKLSFYQLSHYLQCSEGHAEFAGVQCSVFESP
YPMTMALSVLVTIEMCNALNSLSENQSLLKMPPWSNPWLVGAICLSMALHFLILYVDPLP
VIFQIRPLSWPQWVVVLKMSLPVILMDEALKFLARNYIEPGSQIQTLEEEEELQRTRASV
GLVSAMMTRLRQSVKGVSWSFVLISTPLVIWIFSLDSDITNIFWE
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggataatgctcatactaagacggtggaggaggttttgggattcttctgcgtgaacgag
tctacaggcttgagctgtgagcagctgaagaagaacagggagagatggggacccaatgaa
ttgccagctgaagaagggaaatccctttgggagctggtcctggaacagtttgaggatctg
ttggttcgaatcttgctgctggctgcatgcatctcctttaccctggcttggttcgaggaa
ggggagggaacgatcacggcctttgttgaacccttcgtcatcctcctcatcctcattgcc
aatgctattgtgggagtgtggcaggagcgtaatgcagaaaatgccattgaggctcttaag
gagtacgagccagagatgggcaaggtgtaccggcaggacaagaagagcgtccaaagagtc
agagcccgagatattgttcctggagacattgttgaagtcgcagttggtgataaggtccca
gctgacatcaggctgacctctatccgttccaccactctgagggtggaccagtccattttg
acaggggagtctgtgtcagtgctcaaacacacagaccctgttccagatcccagagctgtt
aaccaagacaagaagaacatgctattctctggtaccaatattgcagcagggcgagccatt
ggggtcgtcgtggcgacaggggtgcagacagagattgggaaaatccgagatgagatggcc
tccactgaccccgaaaggacgccactacaacagaaactagaccagtttggagaacaactg
tccaaggttatcagtgtgatctgtgtggcagtgtgggccatcaatgtgggacattttaat
gatccagtgcatggaggcagctggctcagaggagctgtttactatttcaagattgctgtc
gcactggctgtggctgccataccagaaggcctcccagcagtcatcactacctgtctggca
ctgggcaccaggaggatggccaggaagaacgccattgttcgcagcctgccatcagtggag
acactgggttgtacctctgttatctgctcagacaaaacaggaacactgaccaccaaccag
atgtcagtctgcaggatgtttgtagtggacagtgtgtcaggggagcactgcagcctgagt
gagttcacagtgactggatctacttacgcccctgaaggggaagtttataaggatggctca
gtggtgaagtgcagtcagtatgaaggcttggtggagatggcttccatctgtgcactgtgc
aatgactcatcactggactacaatgaggcaaagggagtgtatgagaaggttggggaggca
acagagactgccctctgctgtctggtggagaaaatgaatgtgtttgacaccaacctgaga
ggactgagccctgctgagagagctacagcgtgctgctcagtgattaagcagctgatgagg
aaggagctgacactggagttctccagagacaggaagtccatgtctgtcttctgttcatcc
aataaactcaccaggtctgcctctggagccaagatgtttgtcaagggagctccagagagc
gtgctggagcgttgtacttatatccgggtcagcggctctgctcgtgtgcctttaagccca
gtggttcgagagcagctcctgtccactgtgcgggagtgggggtcaggccgagacacgctg
cgctgtcttgccatggcaaccagggacacaccccctgatatccattgtctcaacctggag
aactcagctgcctttgctgactatgagtcggatctgacctttgtgggctgtgtgggcatg
ttggacccacccaggaaagaagtgcttggcgcagtccgaatgtgtaggcaggctggcata
cgagtcatcatgatcacaggtgacaacaaagggaccgcactgtctatctgtcggagggtg
gggatcattacagagcaggaagaggagcaggagggcgcgggggtcattggaggcctgaca
gggcgggagtttgacgagctgcccccccacctgcagcgtcaggcctgccgaacagcacgc
tgctttgcccgggtggagccagcacacaagagtcgtattgttgagtatctgcagagcctg
agtgacatcactgccatgacaggtgacggggtgaacgatgcgccggcgctgaagaaggcg
gagatcggcatcgctatgggcagcggcacagctgtggccaagtcagcctccgagatgatc
ctggctgacgacaacttctccacaattgtggcagctgtggaggagggcagagccatttac
aacaacatgaaacagttcatcagatacctaatctcatctaacataggagaggtggtctgt
attttcctgacggccgcactcggcatgcctgaagcattgatcccagtccaactgttatgg
gtcaacctggtcactgacggtttcccagcaacagctcttggcttcaaccctcctgacctg
gacatcatgtcccgtcctcctcgctcccccaaagagcctctcatctccagctggttgttc
tgtcgctacctcatcatcggatgttatgtgggagcagcaacagtaggagccgctgcctgg
tggtttatggcagcccatgatggacctaaactttccttctatcaactgtcccactacctg
cagtgcagtgaaggccatgctgagtttgctggtgtgcagtgttcagtctttgaatctcct
tatcccatgaccatggctctgtctgtcctggtaaccatagagatgtgcaatgcattgaac
agtctttcagagaaccagtccctgctgaaaatgcctccctggtcaaacccctggctggtg
ggagcaatctgtctgtccatggccttacacttcctcattctctacgtagacccactgccg
gtgatatttcagatacgcccgctgtcatggcctcagtgggtggtggtcttgaagatgtcg
ctgcctgtcatcttgatggacgaggcccttaagttcctggcccgcaactacatcgagcca
ggaagccagatccagacactggaagaggaagaggagctgcagaggactagggctagtgtg
ggattggtcagtgccatgatgacaaggctacgccagtcagtgaagggtgtgtcctggtca
ttcgtcctgatctccacaccgctagtgatctggatcttcagcctggactctgacataact
aacatcttctgggagtga
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