Lates calcarifer (barramundi perch): 108888449
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Entry
108888449 CDS
T04895
Name
(RefSeq) DNA polymerase delta subunit 4
KO
K03505
DNA polymerase delta subunit 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03030
DNA replication
lcf03410
Base excision repair
lcf03420
Nucleotide excision repair
lcf03430
Mismatch repair
lcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108888449
03410 Base excision repair
108888449
03420 Nucleotide excision repair
108888449
03430 Mismatch repair
108888449
03440 Homologous recombination
108888449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108888449
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108888449
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
108888449
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
108888449
MMR (mismatch excision repair)
DNA polymerase delta complex
108888449
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_delta_4
Phage_cap_E
Umbravirus_LDM
Motif
Other DBs
NCBI-GeneID:
108888449
NCBI-ProteinID:
XP_018539951
UniProt:
A0A4W6FVH3
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Position
LG5:9714861..9718038
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AA seq
108 aa
AA seq
DB search
MTTKHRLITDSFKVVKKARRGGKREKRSTPPPPQKEAETDTVRQEELQKLRQFDLDWRFG
PCTGISRLQRWERAQLHGLNPPEEIRELLLKTHIDPEYKLSLWSEYPL
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaagcacagactgataactgattcattcaaggtggtaaagaaagcaaggagg
ggtgggaaacgagagaagagatctactcctcctccaccacagaaagaggctgagactgac
acagtcagacaggaggagctgcagaagctcagacagtttgatctggactggagatttggg
ccctgcacaggtatcagcaggctgcagagatgggagagagcacagcttcatggtctgaac
ccacctgaggagatcagagagctgctgctgaaaacacacatcgatcctgagtacaagctg
agcctgtggagtgaatatcctttgtga
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