Lates calcarifer (barramundi perch): 108888450
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Entry
108888450 CDS
T04895
Symbol
sdk1b
Name
(RefSeq) protein sidekick-1 isoform X1
KO
K16353
protein sidekick
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108888450 (sdk1b)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Other
108888450 (sdk1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
Ig_Rha78A_N
Ig_RIMBP2
Ig_PDGFR_d4
C2-set
Motif
Other DBs
NCBI-GeneID:
108888450
NCBI-ProteinID:
XP_018539953
UniProt:
A0AAJ7PVR3
LinkDB
All DBs
Position
LG5:9487276..9706228
Genome browser
AA seq
2189 aa
AA seq
DB search
MKPGISCPDGSPERVEGPASGCRQMRMMVATGTTRSGSQCLPLFLLLLLCSSCHMLHGQE
VAPYLRGGGQGQQVMLEGNRLVLTCLAGGSWPLQYRWTLNSSNITDWTPQYRLSLPSLKR
TDAGLYQCMVRNRMGAVIHRRTEVQVAFLGNFSTEEQRKTVTQGRAAIISPPPLASFPRP
LVTWFKDGQKIIPNNRIEITSDNQLVVLATTATDAGRYHAEVVNEMTGENATSPAVYLSV
SVGKKNRGSTDPESELVAPAIVIGPKDTTVVAGNEATLECIANARPVDSLTVSWKRDGRR
LASGRRLIIPAPTSSDTGFYVCEASLSNSTAKPVEARAHLSVMEPPSLTAQPKRKIFAEL
DRNVDIPCLATGVPQPRIEWYKDAVPLSKLANPRYKVTTATGLTVRRVQPGDGGIFQCFA
RNAAGETEAHTQLLVSSVAPTFTSPPTDQTVTDGNTALFTCQTSGAPKPAITWRKGLQVL
ASGSVQVPRFTLLQSGGLQIEPVSYQDSGDYTCIASNSEGTINATATLTVWSRTVISVPP
TDQRVIKGTTAILDCNATHDPRVNISFKWDRGGVPVPPTSGGRVSVRRGSLTIGQTWSGD
IGDYTCTVTSQAGNDSRSARLEVIELPHSPRSLTARLNDSDSRSVLLSWLRPFDGNSPLL
YYLLELSENNSPWKVYLSEVDPAVTEVSVGGLTPARTYQFRLCAVNQVGRGQYSAETQRL
MLREEAPSAPPKNIVASGRTNQSIMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGDYQEKN
ISSPETNYCLLKELIIWTQYQIQVAAYTGAGLGVYSSPVTEYTLQGVPTAPPQEVEVVAI
NSTTIRFTWNPPPQQFINGINQGYKLLVWPEQSPEDIIVVTITPDYPGSRHTGLVSGLKK
FTWYFGATLCFTTPGDGPRSPPTLVQTHEDTPGAVRHLSFTEILDTSLRVSWKEPEDKNG
IIIGYVLWWEVSAVESSRQERSLSNSTLQYQLTGLTSTTAYTLQVAALTAAGRGVVTSST
ISTGVPPELPGAPSNLVISNISPRTATLRFRPGPDGKTAISRWIVEGQVVKKDGEEEAWR
VVYQKDNQPDADTLEIPDLTPFTQYRFRMRQVNIVGSSPMSTPSRLIQTLQAAPDTHPSN
LTLLSATQTSLRLSWKPLPESDYNSSPETVGYRLRVWRTDGQGEDRTEDVEGAGRTSEAT
IEGLNPWTQYQVQIQAYNSIGPGPWSNTVAANTAESVPSGSPMNVTAEAVSSTRILLTWS
PLPQAQKNGVILGYKVLYSEKDSEGPPSVQVAEGEGTVSLLLGALQKYTVYSLQVLAYTR
MGDGPLSNPTLLRTKEDVPGPTVRMVFPEVRLSSVRVVWQPPTNPNGIILGYQISYCLDS
RDPLRWTTVEVGSNARQFTVTGLSPEQTYVFRLTARTAVGWGEEQEALVVTTERRERPQP
PRKLAVPQDGVEARRVRLHWVTGGSGSSPLRYFTLQVKQLPSGDWSTHTADIPHNVTVWT
IDRLKPFTSYKFRMLATNDIGDSLLSKETDAITTLQDVPDEPPVILAVKPTTTTSVLVQW
KHPSDDSINGVLTGYRLYYRELPVNTSTFAEAEVRTTKNTTTSALITTKSTFKTVSSASL
TEFELTQLKKFKRYQIVMTSYNIIGESPPSTPVEVFVGEAAPSVAPQSIRVSAVSPSILE
VTWDTPPLETQNGLIQGYKIHYWERDKQNQSEKVKVIFVPDTRVHLTNLTSYTPYLVTLT
AFNTAGDGPPSDPRGARTLQSAPSQPSYLSFSEVTGGSVNVSWGTPLTPNGQLEGYRVVY
QPTAPVQGVSKVVTVDVKGSWQRWLKVRDLVKGATYAFSVQALTVSYGPPIQANITAQPM
QGTPGSPMEMSITKTSSALNIHWTEGDTGAAPVTGYVIEARPSDEGVWDSFIRPLPPTSR
SVSVPLERLRSGISYEFRVIAVNRYGYGQPSTPSASLAALSERPFYEEWWFLLVMALVGL
ILILVLVFTLLLHGHSTKYKACGTGKHVSTVEESVTLDNGGFTALELNSRTLNTKNSFLK
KNGTRSPPRPSPGGLHYSDEDICNNYNGAVLTESTTLTEKPTEVSESELTDSDYEDEQPK
HSFVNHYMSDPTYYNSWKRQPKGLKGISAPFGYEECATADTEPYYQTVVTQHSTGGAYTP
TGQPAHTHVNPNTNPPGSRTPVTGFSSFV
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgggaatcagctgtcccgatggctccccggagcgtgtggagggacccgcatca
gggtgccggcagatgaggatgatggtggcgaccgggacgacccggagcgggagccagtgt
ctgcctctctttctcttgcttcttctctgcagcagctgccacatgttgcacggccaagag
gtggctccctacctgcgagggggtggacaggggcagcaggtgatgttggagggaaacagg
ctggtgctgacctgcctggctggaggcagctggcctctgcagtaccgctggactctcaac
agcagcaacatcaccgactggacgccacagtacaggttgtctttgccgtctctgaagagg
actgatgctggcctgtatcagtgtatggtgaggaacaggatgggagcagtgatacacaga
agaacagaggtgcaggtggcctttttggggaacttttccactgaggagcagaggaagact
gtgactcagggcagagcagccatcatcagcccgcctcccctcgcctctttcccccgacct
ctggtcacatggttcaaagacggacaaaagatcatccccaacaaccgaatagaaatcact
tcggacaatcagctggtcgtcctggcaaccaccgcaacagacgcaggacgttaccatgca
gaggtggtgaacgagatgacaggagagaatgcgacgagtcctgctgtctacctgagcgtc
tcagttggcaagaagaaccgtgggtcaacagatcctgagtcagagcttgtggctccagcg
attgtgattggacccaaagacacaacagtggtggcagggaacgaggctacactggagtgc
atcgctaatgccagaccggttgacagcctcacggtgtcgtggaagcgtgatgggcgtcgg
ctggccagtgggcgtcggctcattattcctgcccctacttcttctgacacggggttttat
gtttgtgaagcgtcgcttagcaacagcactgccaaacccgtggaggcaagggcacacctc
agtgtaatggaaccaccatctctgactgctcagcccaaaaggaagatctttgctgagctc
gacaggaatgtggatatcccctgcctcgctacaggcgtgccccagcccaggatagagtgg
tataaggacgcggtgcctctttccaaactggccaaccctcgctacaaggtcaccacagca
accgggctgacggtgcgcagggtgcagccaggagacggaggaatattccagtgctttgct
cgcaacgctgctggagagaccgaggcacacacacagctccttgtgtccagtgtggccccc
acatttacatcccccccaactgaccaaacagtaaccgatggcaacacagccttgtttacc
tgccagacaagtggggctccaaaacctgccatcacctggaggaaaggactgcaggtctta
gccagcggctctgtccaggttcccaggttcacactattgcagtcaggtggtttgcagatt
gagccagtcagctaccaggattcaggagactacacctgcatcgcctccaactcagaggga
accatcaacgccactgctacgctcaccgtctggagtcgtacagtcatctctgtgcctcca
acagaccagcgggttatcaagggaactactgctattctggactgtaacgctacccacgac
cccagagtcaatatcagcttcaagtgggatcgtggtggtgtgccggtccctccaaccagc
gggggccgtgtttctgtgcgccggggctctctcactattggccagacgtggtcaggtgac
ataggggattacacctgcactgtgacttcacaagctggcaacgattctcgctctgcacgc
ctcgaagtcattgagctgccgcactctcctcgctccctgacagcccgtctcaacgactct
gactcccgctccgtcctcctgtcctggctacgccccttcgatgggaactcccctcttctg
tactacctgctggagctctcagagaacaactctccatggaaggtttacctatcagaggtc
gatcccgcggtgaccgaggtatcagtgggcgggctcacacctgccaggacctatcagttc
agactttgtgctgtcaatcaagtgggcaggggtcagtacagtgcagagactcagagactg
atgctcagggaggaggcacccagcgctcctccaaagaatattgtggccagtgggcggaca
aaccagtccatcatggtccagtggcagcctccaccagaaccccagctcaatggagtcctc
agaggatatgtactcaggtaccgtctggcagggctgccaggggactaccaggaaaaaaac
atcagcagcccagagaccaactactgtcttctgaaagagctgatcatctggacacagtac
cagatccaggtggctgcctacactggagccggcctgggcgtctacagcagcccagtcact
gagtacactctgcagggggttcccacagcacctccgcaggaagtggaagttgtagctatc
aactcgaccaccatccgcttcacatggaaccctccacctcagcagtttattaatggcatc
aaccagggatacaagctgctggtctggccagagcagtctccagaggacataattgtagta
accatcaccccagactacccaggttcccgccacacaggattagtcagcggactcaagaaa
ttcacctggtacttcggtgccaccctctgcttcacaacacctggagatggcccccgcagc
ccgcccaccctagtgcagacacatgaggacacacctggagccgttcgccacctgagcttc
actgaaatcttagacacgtcactcagagtcagctggaaagagcctgaagacaagaatggc
atcattattggctacgtgttgtggtgggaagtgtctgcagtggagtcaagtcgtcaagaa
cgttctctgtccaactccaccctgcagtaccagctgaccggcctcacctccaccacagcg
tacacactacaggtggcggcgctcactgccgcaggacggggcgtggtcacatcctccacc
atctccactggagtcccaccagaacttcctggagcgccgtcaaacttagtcatctctaac
atcagccctcggacagcaacacttcggttccgccctggtcctgatggaaagacagcaata
tcgcggtggattgtagaaggacaggtagtaaagaaggatggagaggaggaggcttggaga
gttgtctaccagaaagataaccagcccgatgcagacacactggagatccccgacctcact
ccgttcactcagtacaggttcaggatgcgtcaagtgaacatcgtcgggtccagtcccatg
agcaccccctccaggctgattcaaaccttacaggcagcccctgacacacacccctctaac
ctcaccctgctgtctgctacacagaccagcctgcgcttgagctggaagcctcttcctgag
tctgactacaacagcagcccagagactgtgggctaccggctgcgtgtgtggaggacggac
gggcaaggggaggacaggaccgaggatgtagagggagcagggaggaccagcgaggccaca
atagagggactgaatccttggacccagtaccaggttcagatacaggcctacaactccata
ggacctggaccttggagcaacactgttgctgcaaacactgcagaatccgttccatctgga
tctccaatgaatgtgactgctgaggcagtgagttccacccggatcctgctcacatggtct
cctctccctcaagctcagaagaatggagtcatacttggatataaggtgttgtacagtgag
aaggactcagaaggtccccccagtgttcaagtggcagaaggagagggcacggtgtcgctg
ctcctgggagctctccagaaatacacagtgtactcgctgcaggtgctggcatacacacgg
atgggtgacggacctctcagcaaccccacactgctacggaccaaagaagatgtcccaggc
cccactgtcaggatggtgtttccagaagttcgactctcatcagttagggtggtttggcag
ccacccacaaaccccaacggcatcatattaggctaccagatctcctactgcctcgacagc
agggaccctctgcgctggaccacggtggaagtgggctccaacgctcgccagttcactgtc
acaggactttcccctgagcagacctacgtgttccgactcactgctcgcactgccgtgggc
tggggcgaagaacaggaagccctggttgttaccactgagcgaagagagcgtccccagcca
cccaggaagttggctgttcctcaggatggggtcgaagctcgccgcgtccgcctccactgg
gtgaccggtggctcaggctcctctcctctgagatacttcactctgcaggtcaaacagctg
cccagtggggactggagcacgcacaccgctgacatcccacacaacgtgaccgtctggacc
attgacaggttgaagcccttcacatcatacaagtttcgaatgctggccaccaacgatata
ggagacagcctcctcagcaaagagacggacgctattacaactctgcaggatgtgcctgat
gagcctccagtgatcctcgcagtgaaacccacaaccactacctcagtcctggtgcagtgg
aagcatcccagtgacgacagtattaacggggtgttgactggataccggctgtactacaga
gagctcccagtaaacacctccactttcgctgaagcagaagtccggacaacaaaaaacacc
accacaagtgccctcattacaaccaagagcaccttcaagacagtcagcagtgcctcgcta
acagagtttgagttgacacagctgaagaaattcaaacgttaccagattgttatgacaagc
tacaacatcatcggagagagcccaccctccaccccggtcgaggtgtttgttggagaggca
gctccatcggtggcccctcagtctatcagagtgtcagccgtgtccccctccatcctggaa
gtgacctgggacacaccccctctcgagacccagaatggactcatccaaggatacaagatc
cactactgggagagggacaagcagaaccagagtgagaaggtgaaggtgatttttgtccca
gacacccgtgtgcatctcaccaatctgaccagctacacgccttacctggtcacgctgaca
gccttcaacacggcaggagacggaccgcccagtgacccccgtggggctcggaccctgcag
tcagctcccagccagcccagctacctgtccttctcagaggtgacaggaggaagtgtcaac
gtgtcctggggaactccgctcactcctaatggacagctagagggctacagggtcgtctac
cagcccacagctcccgtacaaggagtgagtaaagttgtgacggtggacgtgaagggcagc
tggcagcgatggctgaaggttcgggacctggtcaaaggagcgacgtacgcgttcagtgtt
caggctctcacggtcagctatggaccacccatacaggcaaacatcactgctcagcctatg
caaggcacccctgggtctcctatggaaatgtccatcaccaagacgtcctctgccctcaat
atccactggacagagggagataccggtgcagcacctgtgaccggatacgtcattgaggct
cgtccctcagatgagggggtgtgggattccttcatcagacccctccctcccaccagcagg
tctgtttcagtgccactggagcgcctgaggtccgggatcagctacgagttcagagtcatc
gctgttaatcgctatggttacggacagccgagcacaccctctgcttctcttgctgcgctg
tcggagcggccgttctatgaggagtggtggttcctgctggtcatggctctggtgggactc
atcctcatcctggtcttggtcttcacactgctgctgcatggacacagcaccaagtacaaa
gcctgtggcacagggaagcacgtgtccacagtggaggagtctgtaactctggacaacgga
ggattcaccgctctggagctcaacagcagaacgctcaacaccaagaactccttcctgaaa
aagaacgggaccaggtctcctcccaggccgagtccaggtggtcttcactactcagacgaa
gacatctgtaacaactataatggagctgtgctcactgaaagcaccacactcactgagaaa
cccactgaggtctctgagtcagagttaacagacagcgactatgaggacgagcagccaaag
cactccttcgtcaaccactacatgagcgaccccacctactacaactcctggaagcggcag
cccaaaggcctcaaagggatcagcgctcctttcggctatgaggagtgcgccaccgcggac
acggagccctactaccagaccgtggtcacccagcacagcacaggcggcgcatacacaccc
acggggcagcccgcgcacacacacgtcaaccccaacaccaacccaccgggatcacgcacc
cctgtgacgggattctcctcatttgtttga
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