Lates calcarifer (barramundi perch): 108888454
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Entry
108888454 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108888454
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108888454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT
TOR1L1_N
MMS19_C
PDS5
CEP104-like_TOG
Cnd1
SesA
Motif
Other DBs
NCBI-GeneID:
108888454
NCBI-ProteinID:
XP_018539959
UniProt:
A0AAJ7PVV7
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All DBs
Position
LG5:complement(9361034..9367801)
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AA seq
918 aa
AA seq
DB search
MDRECVSLLPRVCEVLVDSGRSLPDDTSLEKLLDWFTGLTKTGGSLLETFPCLPEFISTV
VNKTSSDPGVISFTLKLSGLIAATEDGFRMLQERSILDLAFNHQHWHEAGLWEDPCIRIS
WIQGLRSMLQHSKALSFFVQADFTLPLLQLQTDASLFVVSAANQMLAHILLFFQPTSPAG
FNGVDKKHGDGKTTRASIADIEHSGIPMETSQDYTTVVTAILEYLKESLVPKENTGLHQS
LQILKLLALLLAQARPSLRDKLLQTVAGSLEELATAGYSQLTLPLMDIILAAHSSSSTDG
CVPDQRVTHLLSSMLKMDKPSDLIHAAAAFLRRGNQDTVHSAQAVRILLLPLHIITGQTL
LGTNTAVEEHQFSVVEQLKTKTPCISMICVCLTNTPQITLTPPDVLPCPPVLIVTAVLSL
LRICSGDSSSLSTGCAEVFRNVIGSGKVQKCALEALMGLSSSPGVKDKLTEVFTVLIQYL
NNPDLDPTVLHKSYQALVKWMSVCKDLSLITHQLRQDLSEVVKKRVCDMRWEVRDSTVEF
VGKLASVVSSAEEPCDAPEAFLGGCCSTPLLREALQDPESYVRASAISALAQTLAHSWQQ
GAALTQEQTDIVSRLLEILSQDTEGFARRAVVQYFITWFSSHSSHTSPSSSPSSSSSLLM
NSVSSVLSLGSVDLDWEVKVHTLELAELLLDEAFSGHRGYRKGSNNHHAPLHPYAVVSGQ
TYPLHTHAGTRTEGVETDLAGVLHNLVEQGVVSALLSGLVDCDRPVGLKACQLLITLRET
VCPPLLDATAAVTTVAEVPCKLPGWGWGQEIRKILVLKKCDQAKEADVAAQRRFNGADSG
DCGEVEKEGVSEEGDVVCVGVCEVLQSLGLDVRLNILTQSSDHVQNSPLSLLQDILTASA
AHTRPDAQPGQEVIVDCY
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacagagagtgtgtgtcgctgctgccccgggtctgtgaggtgctggtggactcaggg
aggtctctgcccgatgacaccagcctggagaaactgttggactggttcacagggctcacc
aagaccgggggatctctgctggagactttcccatgtctgcctgagttcatatccactgtg
gttaacaaaacatcatccgaccctggtgttatctccttcactctcaaactctctgggtta
atagctgcgactgaggatggcttcagaatgcttcaggagcgctccattctggacctcgcc
tttaaccatcagcactggcatgaagcagggctctgggaggatccttgcatacggatcagc
tggatccagggcctaaggagcatgctgcagcactcaaaggctctcagtttctttgtacaa
gctgatttcaccctgccactcctacaactccagacagacgcaagcctatttgttgtctca
gctgccaatcaaatgctcgcccacatcctgctcttctttcagccaacatcgcctgcagga
tttaacggcgtagataagaaacacggtgatggcaagacaacacgagcctccattgcagac
atagagcactcaggcatccctatggaaaccagccaagattacactactgttgttacagca
atcttggagtacctcaaggagtcactggttcccaaagaaaacacagggctccatcagagt
ctgcagatcctcaaactcctcgctctgctcctagcccaggccaggccttcgctccgggat
aagctgctccagacagttgcaggctctctggaggaactggcgacagcaggctacagtcag
ctcacgctgcctctgatggacattattctggctgcacacagcagctccagcactgatgga
tgtgtcccagaccaacgtgtcactcatcttctgtcctccatgttgaaaatggacaaaccc
tctgacctcattcatgctgcagctgcttttctccgcagaggcaatcaggacactgtacac
tcagcccaggctgtgagaatactgctcctacccctccatattataaccggtcagactcta
ctgggcacaaacacagcagtagaagagcatcagttttcagtggtagaacagctgaagact
aaaaccccctgcatctctatgatttgtgtctgtctgacaaacacgccacagatcacactc
acgcctcctgatgtactcccctgtcctccagttttaattgtcacagcagttctgtcactg
ttaagaatctgcagcggagactcttcctccttgtccactggctgtgctgaagttttcagg
aatgtaattggcagtggcaaagttcagaaatgtgctctagaggctctgatgggtctcagc
agcagcccaggagtgaaagacaagctgactgaagtgttcacagttctgatacaatatctg
aacaatcctgacttggaccccactgtactacacaagtcctaccaggctttagtgaagtgg
atgagtgtgtgtaaagacctctcccttataacacaccagctcagacaagatctcagcgag
gtggtgaagaaacgtgtgtgtgacatgcgttgggaggtgagagactcaacggtggaattt
gtgggaaaactggcaagtgttgtgagttcagctgaggagccctgcgatgcgcctgaggct
ttcttgggcggctgctgtagcactcctctcctcagggaggcgctgcaggatccagagagt
tatgtgagagctagtgccatctctgcactggcacagacactggcacacagctggcagcag
ggggcagcactcacacaggagcagactgacatagtgagccgactgcttgaaattctctcc
caggacacagagggattcgccaggagggcagttgtgcaatatttcatcacctggttttct
tcacactcctcacacacatctccctcatcatctccctcctcctcctcctctctcctgatg
aactctgtgagctccgtcctctctctaggcagcgttgacctggactgggaggtcaaagtt
cacactctcgagctggctgagctgctgctagatgaagccttttcaggtcaccggggttac
aggaagggctcgaacaaccatcatgccccgctacacccatacgctgtggtttctggtcag
acttacccgcttcacacacacgccgggacacgcacagagggtgtggagacagatttggct
ggtgtgctgcacaatctggtggagcagggagtcgtctcagctttgttgagtggtctggtt
gactgtgatagacctgtgggtctgaaggcctgtcagctgctgattacactcagagaaaca
gtctgtcctccgttgctggatgcaactgctgctgtgacaacagtcgctgaggtgccctgc
aaactgcctggatggggttgggggcaggagattagaaaaatactggtgttgaagaagtgt
gatcaggctaaagaggcagatgttgctgctcagagacgtttcaatggagcagattctgga
gactgcggtgaggtggagaaggaaggcgtgagcgaggaaggcgatgttgtgtgtgttggt
gtgtgtgaggtgctgcagtctctgggtttagacgtgaggctgaacatactgactcaaagc
agcgaccatgtccaaaactctcccctctctctgctgcaggacatactgactgcgagtgct
gcacacactcgaccagatgcacaaccagggcaagaagtcatagtggactgttattga
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