Lates calcarifer (barramundi perch): 108888457
Help
Entry
108888457 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: carbohydrate sulfotransferase 12
KO
K04742
chondroitin 4-sulfotransferase 12 [EC:
2.8.2.5
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108888457
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108888457
Enzymes [BR:
lcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.5 chondroitin 4-sulfotransferase
108888457
Glycosyltransferases [BR:
lcf01003
]
Unclassified
Sulfotransferases
108888457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_2
New_glue
DDHD
Zip
Paf1
Motif
Other DBs
NCBI-GeneID:
108888457
NCBI-ProteinID:
XP_018539962
UniProt:
A0AAJ7V837
LinkDB
All DBs
Position
LG5:9377529..9384308
Genome browser
AA seq
423 aa
AA seq
DB search
MGVWRGLRVAFILGSLFMILLIIVYWDDVGGFSLYPLQDPKHQSLQSDSCPWTTAGPSLS
TSTQISSSFTAPTTTSSTKVIPEDTRAAAGKQEQEEEEEEKQEHEKMETREDEKKERSHT
SVNDREQERRKQRIMDVCSGEDTVEFPGRTRPFEQIPNRELDHLIVDDTHQIIYCYVPKV
ACTNWKRVMVVLSQSLISPSSGKPYTDPEAVPPDLVHNSTLHLTFAKFWRHYGSLSRHLM
ALKLQRYTKFLFVRDPFVRLISAFRNKFGRPNEDFYKQFGSVMLRRYGNVSGSLPDTAAE
AFAAGIKPTFQQFITYLLDPETERESIFNEHWRQVYRLCHPCQVKYDFIGRLETLEADAD
HLLKLLEVDHLLHFPSGARNRTAASWERDWFAQIPITMRRELYKLYEPDFKLFGYPKPDS
VLH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgtggcgtggtcttcgagtggcgttcatcctggggtctttgtttatgatcctg
ctcatcattgtctactgggacgatgttggtggcttcagcctctacccactgcaggacccc
aaacaccagtcgcttcaatccgattcctgcccttggacaactgcaggcccttcgctttct
acttccacccagatcagttcctctttcaccgcccccaccaccacttccagtacaaaagtc
atccctgaggatacgagggctgcagctggcaaacaagaacaggaagaggaggaggaggaa
aaacaagagcatgagaagatggaaacaagggaggatgagaaaaaagagaggagtcatact
tctgtcaatgatagggaacaggagaggaggaagcagaggatcatggatgtttgttcggga
gaggacactgtggaattccctggaaggactcggccgtttgagcagatccccaacagggag
ctggatcaccttatagtggacgatacgcaccagattatctactgctacgttcccaaggtg
gcgtgcactaactggaagagagtgatggtggttttgtctcagtctttgatctcaccttcc
tcaggaaaaccttacactgacccagaggctgttcctccggacctcgtacacaactccact
ctccatctcactttcgccaagttttggcgccattatggttctctgtcccgccacctgatg
gcactcaagctccagcggtacaccaagtttctctttgtgcgagacccttttgtacgtctc
atctctgccttcaggaacaagtttggaaggcccaacgaggacttctacaagcagtttggt
tcagtcatgctgcgtcgttatggtaatgtctctgggagtttgccagacacagcagctgag
gcgtttgcagcaggaatcaaaccgacttttcagcaatttatcacataccttttagatcca
gagactgagagggagagtatcttcaacgaacactggcgacaggtgtatcgtctgtgccat
ccatgccaagtcaagtatgacttcattggacgactagagacccttgaagctgacgcagat
cacctgctgaagcttctggaggtggatcatctgctccacttcccttcaggggcccgaaac
cgaactgcagccagctgggaaagagactggtttgcacagattcccataacaatgaggagg
gaactgtacaagctgtacgaaccagactttaagctgtttggttatcccaaacctgacagt
gtactccattag
DBGET
integrated database retrieval system
