Lates calcarifer (barramundi perch): 108888463
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Entry
108888463 CDS
T04895
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108888463
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
108888463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
Ank_3
Caskin1-CID
SAM_2
Caskin-tail
SH3_2
SH3_9
SH3_1
ANK_LRRK2
RPN2_C
Motif
Other DBs
NCBI-GeneID:
108888463
NCBI-ProteinID:
XP_018539968
UniProt:
A0AAJ7PVS2
LinkDB
All DBs
Position
LG5:9277135..9309309
Genome browser
AA seq
1332 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTAQRLLQRPRPGKAKLLGAAKRVNVNIQDADGLSPLHHAALSG
NKELISLLLEAQAAVDIKDHKGMRPLHYAAWQGKTEPMKMLLKAGSSVNGQSDEGQIPLH
LSAQHGHYDGSEMLLQHQSNPCISDSGGKTPLDLACEFGRVGVVQLLLSSNMCAAMLEPK
PSDPNGVSPLHLAAKNGHIEVIRLLIQAGIDINRQSESGTALHQAALCGKTEVVRLLLDS
GISAGVRNTLSQTALDIVNQFTTTQASREIKQLLRDASAAMQVRALKDYCNNYDLTSLNI
KAGDIITVLEQHSDGRWKGCIHDNRTGNDRVGYFPSNMVEVIKRAGSRTAELSPQGSPTL
GQQSSTCEDIWVLRKPLAGGDRSGSVGSLGSVRSSSSLQSSGNTHVLTTPAPSPHPAPTP
GVNTHGLNAPGLHAQAEGVKLLATVLSQSVKAKEHLLEQSQSVEQSASSSSCTVHEQRSF
ERKAEEDDGKKQAVVAWLGEFQLQFYTTHFLTAGYDLDTISRMTPEDLTAIGVMKPGHRK
KLTSEISKLPSTDWLPDHKPANLADWLSHLGLSQYYQVLVQNGYENIDFISDISLEDLQE
IGITKLGHQKKLMLGVRRLKELQRGESSSEPPQSPSTPPSSPGGSTGSEPRREARKQRDG
GPIPLAKPRPGLTHSQTPPHTPTQTPPQTPPHARTQQASPRARPRPSTQMAAADSSVPLL
RLPSEEEERRRTHSLIGSESDSRYATVCRSSSARTATSNDVTVNRSQSSVTLRPRRKGRP
PTPPKRSCSSITGGDGEGEGQGEGLLGLPTYRERRASDCGALGSALRAQDSAGLERSEGA
SGSVRSLAAMLETSIVGGAKTLPRNLGSSTNYLQVSPPILRRQTGAGGLGSEDDDVISRR
RTISGPEGIPGDQTDLLPRQPAQQRPEPRPRSTVVTSASDITDGTATLRRKPRPLATDSE
APASMATTVVTMTTSSETIRRRPRTSEHTESVIQSNNQSDSPSSQTDSSRKNRGEAQQNG
GVVLRRRPASGVSDRTEANTESCEWMEARKSLKPAVSPKPSTAALRKTQVDPPTPTRRVP
LPGPDSAETAQSPEPKRVPPPVSPKPRGPPTAPKPGKAVVASATMSPSPAATSPTPAPKP
SSPLSAAPLPAPDTPSAPSLSPGLPLTSPSPAQSPSTPSPHPVKPPRSSIAGLSIDLLGG
REVEEEEERRREEEERSQERENKRHKEQEEEERKRAEEESQRELEKKPSRKEGAGEEVES
QAEGGEQEEEVQHRLEETSASLAAALQAVEHKIKEEDAQNDSLSSKKTTVSILDDIGSMF
DDLADQLDAMLD
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggagctgctccaggccgtgaagaccgaggacttgctgacagctcag
cggcttctacagagaccacggccgggaaaagccaagctcctcggagcagcaaagagggtg
aatgtcaacatccaggatgcagatgggttgtcgcctctgcaccatgctgctctgagtggt
aacaaggagctgatctctctgctgttagaggcccaggcagcggtggatattaaagaccac
aaagggatgcgtcctctacattacgctgcatggcaggggaagactgaaccaatgaaaatg
ctgctgaaggccgggtcatcagtcaatggacagtcagatgaagggcagatccctctccac
ctatcagcacagcatggacactacgatgggtcagagatgttgctacaacaccagtccaac
ccgtgtatctcagactcaggtgggaaaacaccattggacctcgcctgtgaatttggacgc
gtcggagtggtccagcttttgctcagcagtaacatgtgtgcagccatgctggaaccaaaa
ccctccgaccccaatggagtgtcacctctgcatcttgctgccaagaacggacacatcgaa
gtcatacggttgctgatccaggctggtatagatatcaacagacaatctgagtctggcaca
gcactacatcaggctgccctctgtgggaagacagaagtagtacgcctgctgctggatagt
ggcatcagtgcaggggtgagaaacactctgagtcaaacagccctggacattgttaaccag
ttcaccaccacacaggccagccgagagatcaaacagctactgcgagatgcttcagctgca
atgcaggtgcgagcactgaaggactactgcaacaactacgacctaaccagcctcaacatc
aaagctggagacattatcacggttttggagcaacactctgatggtcgatggaaaggctgt
attcacgacaaccgcacaggaaatgaccgcgtgggctactttccctccaatatggtggaa
gtgatcaagagggcaggttcgcggactgcagagcttagtcctcaaggctctccaaccctg
ggacagcagagcagcacctgtgaagatatctgggtgctacgcaaaccgctggcaggtggc
gatcgcagtggcagtgtgggcagtcttggcagcgttcggtcatcaagcagtttgcagagt
tctggaaacacacacgttctgaccacccctgcacccagtccccaccctgcaccaacacca
ggagttaacacacatggccttaacgctccaggcctgcacgcacaagctgaaggagtaaag
ctcctggccaccgtgctctcccagtcggttaaagccaaggagcatctcttggagcagtca
cagtctgttgagcagtcagcgagctcttccagttgcacagttcatgaacagcggtcgttt
gagcggaaggcagaggaggatgatgggaaaaagcaggcagtagtggcgtggctgggtgag
tttcagctgcagttctacaccacccacttcctcaccgcgggatatgatctagacaccatt
agccgcatgacccctgaggacctgacggcgattggggtcatgaagcctggacatcggaag
aagttaacatcagagatcagcaagctgccctccacagactggctgccagaccacaagcct
gccaatctggcagactggctctctcacctgggtcttagtcagtactaccaggtcctggtg
cagaatgggtatgaaaacatagacttcatctctgacatcagccttgaagatctgcaagag
attggtatcactaagcttggccatcagaagaagctgatgttgggagtgaggagactgaag
gagctacagagaggagagagcagttctgagcctcctcagagcccctccacacctccatcc
agccctggtggcagcaccggatcagagcccaggagggaggcgaggaagcagagggacggt
ggccctatcccgctggctaaacctcgcccaggtctcacacattcgcagacccctccccac
acaccgacacaaaccccaccacaaacccccccacatgcccggacccagcaggcctccccc
agggctcggccgcgcccctctactcagatggcagcagcagattcgtcagtgccgctgctg
cggctgcccagtgaggaggaagagcgacggagaactcacagtctaattggctcagaatca
gactctagatatgccaccgtgtgccgcagcagctccgcgcgtactgccacctctaatgat
gtcactgttaaccgcagccaatcatctgtcaccctccgtccccgtcgaaaaggtcggccc
cctacaccacctaaacggtcctgttcttccattacagggggtgacggggagggagaggga
cagggggagggactgctggggctgccaacctatcgagagcggcgggccagcgactgcggc
gccctgggatcagctttaagagctcaggactcagcaggcctggagagatcagagggggct
tctgggagtgttcgcagtctcgccgctatgctggaaacatccatcgtgggtggagccaaa
accctgccaaggaatctgggaagcagcaccaattacctacaggtgagtccgcctatactt
cgtcgccagacaggcgcaggaggtcttggatctgaggatgatgatgtcataagtcggcgc
aggaccatcagtggaccagaaggcattcctggggatcagactgacctgttacctcggcaa
ccagcccagcagcgtccagaacccaggccccgctccaccgtggtcacctcagcatcagat
atcacagacggcacagcgacgctccgaaggaagccgcgtcccctggcaacagactctgaa
gcccctgcatccatggctaccactgttgttaccatgacaaccagctccgaaaccatacgc
aggaggccacgcacgtccgagcacacagagagcgtcattcaaagcaataaccaatcagac
tctcccagcagtcaaacagatagtagccggaaaaacagaggcgaggcgcagcagaatggc
ggcgtggtcctgaggcggaggccagcatctggggtctctgataggacggaggccaacaca
gagagctgtgagtggatggaagccaggaagtctctaaagccagccgtctcacccaaacca
tccacagccgctttgaggaagacacaagttgatcccccaacaccaactcgcagggtcccc
ctacctgggcctgatagtgctgagacggcacagagccctgagccgaagcgggtcccccct
cctgtatcccccaaaccccgtgggcctccaacagcacctaaacctggcaaggcggtagta
gcttcagctaccatgagcccgagccctgctgctaccagtcctaccccagcccccaaaccc
tcctctccgctctcagctgccccccttccagctcctgacaccccttctgctccctccctc
tctccgggactccctcttacatccccgtctccagcccagagtccctccaccccatcacca
caccctgtcaaacctccccgctcctccattgccggtctctccatcgacttgctgggaggg
cgggaggtggaggaggaagaggaaaggaggagagaggaagaggagaggagtcaagagagg
gagaacaaaaggcacaaagagcaggaggaggaggagaggaagagagcagaggaggagagt
cagagggagctggagaagaagccctcaaggaaggaaggagcgggggaggaggtggagagt
caagcagagggaggagagcaggaggaagaggtgcagcatcgtttggaggagaccagtgcc
tccttggctgcagctctgcaggctgtggagcataaaatcaaagaggaggacgcacaaaac
gattctctttccagtaaaaagacaacggtctccatcttggacgacatcggcagcatgttt
gacgacttggcagaccaactggacgcaatgctcgactga
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