Lates calcarifer (barramundi perch): 108888464
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Entry
108888464 CDS
T04895
Name
(RefSeq) protein kinase C beta type isoform X1
KO
K19662
classical protein kinase C beta type [EC:
2.7.11.13
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04012
ErbB signaling pathway
lcf04020
Calcium signaling pathway
lcf04070
Phosphatidylinositol signaling system
lcf04082
Neuroactive ligand signaling
lcf04150
mTOR signaling pathway
lcf04270
Vascular smooth muscle contraction
lcf04310
Wnt signaling pathway
lcf04370
VEGF signaling pathway
lcf04510
Focal adhesion
lcf04540
Gap junction
lcf04912
GnRH signaling pathway
lcf04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108888464
04012 ErbB signaling pathway
108888464
04310 Wnt signaling pathway
108888464
04370 VEGF signaling pathway
108888464
04020 Calcium signaling pathway
108888464
04070 Phosphatidylinositol signaling system
108888464
04150 mTOR signaling pathway
108888464
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108888464
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108888464
04540 Gap junction
108888464
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108888464
04916 Melanogenesis
108888464
09153 Circulatory system
04270 Vascular smooth muscle contraction
108888464
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108888464
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.13 protein kinase C
108888464
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: AGC group
PKC family [OT]
108888464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
C1_1
C2
Pkinase_C
Kinase-like
ABC1
CEP76-C2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
108888464
NCBI-ProteinID:
XP_018539973
UniProt:
A0A4W6G024
LinkDB
All DBs
Position
LG5:complement(9225322..9256738)
Genome browser
AA seq
667 aa
AA seq
DB search
MADPNSDGEVPESARGFARQGALRQKNVHEVKNHKFIARFFKQPTFCSHCTDFIWGFGKQ
GFQCQVCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKVHTYSSPTFCDHCGSLLY
GLIHQGMKCDHCMMNIHKRCVANVPSLCGTDHTERRGRIHISAQITEDTLTVIIKEAKNL
VPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCCLNPTWNETFTFNLKESDKDRRLSVE
VWDWDLTSRNDFMGSLSFGISELQKLGIDGWFKLLSQEEGEYFNVPVQPDGEDGNEELRQ
KFERARVGPGKPADSSSSSSVCKYDSNGNQDRVKLSDFNFIMVLGKGSFGKVMLAERKGT
DELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYIN
GGDLMYQIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIVYRDLKLDNVMLDSEGHIKIAD
FGMCKENMYDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE
DEDELFQSIMEHHVSYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID
WEKLENKEVQPPFKPKACGRDAENFDRFFTRHLPELTPPDQELIANLDQEEFQGFSFVNP
EYPHSTH
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccaatagcgacggagaggtaccggagagcgcgcgcggcttcgcccgtcag
ggagccctccgccagaagaatgtgcacgaggtgaagaaccacaagttcatcgcgcgcttc
ttcaagcagcccaccttctgcagccactgcacggacttcatctggggctttgggaaacag
ggattccagtgccaagtgtgctgttttgtagtccataagcgctgtcatgagtttgtcacc
ttttcttgtccgggggctgacaaaggacctgcctcagacgatccacgtagtaaacacaag
tttaaggtccacacctactccagccccaccttctgtgaccactgtggctccctcctctac
gggctgatacaccagggcatgaaatgtgaccactgtatgatgaacatccacaagcggtgt
gtggccaacgtcccaagcttgtgtgggacagatcacaccgagaggagaggacgcatccac
atctctgcccagatcactgaggacactctcaccgtcatcatcaaagaggctaagaacctg
gtgcccatggaccccaatggcctgtcagacccctacgtcaagctcaaactgatcccagac
cccaagagtgagagcaagcagaagaccaagaccatcaaatgttgcctcaaccccacctgg
aatgagaccttcactttcaacctaaaagaaagcgacaaggaccgccgtctgtcggtagag
gtctgggactgggatttgaccagcaggaacgacttcatgggatccctgtcctttgggatc
tcagagctacagaaactaggcatagatggatggtttaagctgctgtcccaggaggaggga
gaatactttaatgttcctgtccagccagatggagaggacggtaacgaggagctacgacaa
aagtttgagagggcgagggtgggtccagggaagcctgcggactcctcctcctcctcttcg
gtgtgcaagtacgacagcaatggaaatcaggaccgtgtcaagctctcagatttcaacttc
atcatggttctgggcaaaggcagttttggaaaggtgatgctggctgagaggaagggtaca
gacgagctgtacgccattaaaatcctgaagaaggacgtggtgatccaggatgatgacgtg
gagtgcaccatggtggagaagagagtcctcgccctgtctgggaaaccacctttcctcact
cagctgcactcttgtttccaaaccatggaccgattgtattttgtgatggaatatataaac
ggaggagaccttatgtaccagatccagcaggttggcaagttcaaggagcctcatgctgtg
ttttatgctgcagagattgccattggactcttcttccttcactccaaaggcatcgtgtac
cgggatctgaagctggacaatgtgatgctggactctgaaggccatataaagattgcagac
tttggcatgtgcaaagagaacatgtatgatggagttaccacaaagactttttgtggaaca
ccagactacattgctccagagatcatagcctatcagccttatgggaagtctgtggactgg
tgggcctttggagttctgctatatgaaatgctcgctggacagccgccttttgacggggag
gatgaggatgagctcttccagtcgatcatggagcatcatgtctcttaccctaaatccatg
tccaaagaagctgtcgctatctgcaaggggctgatgaccaaacacccaggtaagcgtctg
ggctgtggtccagagggggagagagacatcaaggagcacgccttcttccgctatatagac
tgggaaaaactggagaataaagaggtccagccgcctttcaaacctaaagcttgtgggcgt
gatgcggagaactttgatcgctttttcacgcgccacctcccagagctgacccccccagat
caggagcttatagccaacctggaccaggaagaattccaaggcttctcatttgttaaccct
gagtaccctcactcaacccactga
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