Lates calcarifer (barramundi perch): 108888549
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Entry
108888549 CDS
T04895
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 20
KO
K09609
a disintegrin and metalloproteinase with thrombospondin motifs 20 [EC:3.4.24.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108888549
Peptidases and inhibitors [BR:
lcf01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
108888549
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Pep_M12B_propep
Reprolysin
TSP1_spondin
ADAMTS_CR_2
TSP1_CCN
Reprolysin_5
ADAMTS_CR_3
Adt-1
Reprolysin_3
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
108888549
NCBI-ProteinID:
XP_018540111
UniProt:
A0AAJ7PW02
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All DBs
Position
LG10:8028959..8105964
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AA seq
1919 aa
AA seq
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MQFAIWLVGLMCHLSAFVRDTLQYRLHPKQESFIKQLSSYEIITPLRVNDFGESFPHTLH
YRRRRRSLNDDLSGLRVHYRIDAFGDRFHLNLTADSGFIAPSYTVTHLGAEQSNGTDSYF
HDPSDMRHCFFRGHVNAKSEYPAVFSLCTGLIGTFTTQHGEYFLEPLINAVGEEYDEEQN
KPHLVYRHDRKRNISNVENNTEPCAASEDSKGPVSFESRENMGEELDSLRATIDDQHIYE
NNSTTTNPRSPHRRKRFLSYPRYVELMVTADAKMVRHHGRNLEHYILTIMSVVAAVYRDP
SVGNLINIMIVKLVIVHNEQEGPTVSFNAATTLHNFCVWQQSQNVQDDSHPSHHDTALLI
TREDICRAKDKCDTLGLAELGTMCDPYRSCSISEENGISASFTIAHELGHVFNMPHDDNP
KCREVGMKHQYHVMAPTLNYDTNPWTWSKCSRKYITEFLDTGYGECLLDEPVGRTYELPT
LLPGQIYNANRQCELMFGPGSQICPYMKQCKRLWCTSAEGDHKGCRTQHMPLADGTDCGH
GMYCRHGMCVNKELDLQPVHGEWGPWGPYSVCSRSCGGGTRSTTRDCNKPEPRNGGKFCV
GRRMKFRSCNTEPCPRGRKDFREEQCSQFDGKHFNINGLPPSVRWVPKYSGILMKDRCKL
FCRVAGTTAYYQLKDRVIDGTPCGTDTYDICVQGLCRQAGCDHVLNSKARNDKCGVCGGD
NSSCKTLAGTFNDAQYGYNTVVRIPAGATNIDIKQVSYSGKPEDDNYLALSDSQSNFLLN
GNFVVAMFKREITFKGTVIDYSGSDTKVERINCTERIEEELILQVLCVGNLYNPDVRYSF
NIPIEEHREQFVWDPSGSWLECNRICQGERRRKAVCVRKSDHLEVSDQRCEHLPRPVAVT
EPCNTDCEVRWHVAGKSECSAKCGPGYRSLDVQCMKYSLMKRQSERMEASMCGDVAKPQT
REPCHGDCLLKNWQYSAWSQCSKTCGRGSRSRESYCMNNLGRRLVDRECNEYQRVVTETC
NDQPCPKWTVSEWSECLVTCGKGMRHRQVSCTMGAGEEKLSEHFCDPSSKPQAVGSCELP
ECASWQVGVWGACAVTCGHGYQMRAVRCVSGDYGDTVDDRECNAAARPRDSQDCEMPGCP
WASPAQSTPRPDNSAQLLTQWRYGSWTACSVSCGKGKRARYVSCRDAQGGVADESYCAHL
PRPPESSACFSPCGQWRAGEWSPCSVTCGMGRTTRQVVCSNYHQPVDQSFCDLEEKPATE
QECTAAPCPSIYHRQRINDQPYGYPQDPGHHPGHSSWNVPSADNQWRTGPWGACSSTCAG
GFQRRVVVCQDADGRSNSYCDERVKPAESKSCDSGPCPLWNYGVWGECTQTCGGGRRTRL
VVCQRPSGQRLNDYNCDVLDKPPEMEQCNQQPCPGSASWHRRPWKPCSVTCGRGTKKREI
ACVLQNQTKIEEEHCSHLPRPRTQKACRARGCPTWKANRWSECSVTCGVGVQSRDVYCRL
KGTGWVREDLCDAHQRPDVARPCQIAECTHYSWVAGEWEECNATCGEGMRSRKVGCMGPG
MTPVQDDYCKPSSQPQSHQPCKRAPCHYMWITGEWSQCSASCGVGYQQRIVSCSVIPSSQ
AAHPYAAAAAAAAAAQSSSASTHCPEPHPPGTRPCLLRDCPHTTYWKVGPWSKCSQTCGA
GVIERRVECVTSKGQPSKHCRPSERPESQAACQDRECQLFASCREVQMRQGVRIDGEYYL
KVKSRILQIYCAEMQTDFPKEYVTLRSGQTDNYSEVYGHRLLNPFECPYNGSRRQDCNCR
NDYSAAGYTLFHKVRLDLSSLRIMITDLQFSQTLFGRPVPFASAGDCYSAAKCPQGQFSI
NLIGTGLKVAEATKWTSQGNYVSVKVHRSEDGTRIYGRCGGFCGKCIPQAHNGLLLEVH
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgcaatctggctggttggactaatgtgtcatctgtcagcatttgtccgggac
acgttgcaataccgattgcatccaaaacaagaaagcttcatcaagcagctgtcatcgtat
gaaatcatcaccccgctccgtgtgaatgacttcggagaatcattcccccacacattgcac
tacagaaggagacggagaagtttgaatgatgacctgtcaggcttacgggttcactacagg
attgatgcgttcggggaccgctttcatctcaatctgaccgcagactccggcttcatcgcc
ccctcttacacagtgacacacttgggagcggaacagagcaacggcacggactcctacttt
catgacccgagcgatatgcgccactgctttttccgcggacacgtcaacgccaagagcgag
tacccagccgtcttcagcctgtgcactggccttattgggacttttacaacgcaacatggt
gaatattttttggagcctcttataaatgctgtgggggaggaatatgacgaagagcaaaac
aaacctcatcttgtctatagacatgacagaaagaggaacatctcgaatgtggagaacaac
acagagccctgtgctgcctcagaagactccaaggggccagtgtcttttgagagcagagag
aatatgggagaggagctggactctctcagagccacaatagacgatcaacacatttatgaa
aacaactccaccacaacgaaccccagatccccacacagacgcaagcgtttcctctcctac
cctcgctatgttgagctgatggtgacggcagatgccaaaatggtgcgtcaccatggacgc
aacctagagcactacatcctaacaatcatgtcagtagtagcagcagtgtatagggatccc
agcgtaggaaacctcatcaacatcatgattgtcaagctagtcatcgttcacaatgaacag
gaagggcccacagtgagcttcaatgctgctacgactctccacaacttctgcgtttggcag
cagagccaaaatgtccaagatgacagccatccttctcaccatgacacagcacttctcatc
accagggaagacatctgccgtgcgaaagataaatgtgacacgttagggctagcggagctg
gggaccatgtgcgacccgtaccggagctgctccatcagtgaggaaaatggaattagtgcc
tccttcaccatcgctcatgagctgggccatgtgttcaacatgcctcatgatgacaaccct
aagtgtcgtgaggtgggcatgaagcaccagtatcatgtcatggctcccacgctcaactat
gacaccaatccctggacgtggtctaagtgcagtcgcaagtacatcacagagtttttagac
actggctatggagagtgcctccttgatgagcctgtaggcaggacgtacgagctgcccacc
ctcctccctggtcaaatctacaatgccaacagacagtgtgaactaatgtttggacccggt
tcccaaatttgcccctatatgaaacagtgcaagaggctgtggtgtacaagtgcagagggg
gaccataaaggatgtcgcacacagcacatgccactggctgatgggactgactgtggacac
ggaatgtattgcagacacgggatgtgcgtaaacaaggagttggacctgcagccagttcat
ggcgagtggggtccctgggggccctacagtgtttgctccaggtcctgtggtggaggaacc
cggagcaccaccagagactgcaacaagcccgagcccagaaatggcggcaagttctgtgtg
ggtcgcaggatgaagttccgctcttgcaacactgagccatgtccgcgagggcggaaagat
ttccgcgaagagcagtgctctcagtttgatggcaagcatttcaacatcaacggtctacct
cccagcgtccgctgggtccccaagtacagtggcatactaatgaaggatcgctgtaagctc
ttctgccgggttgctgggactacggcgtattatcagctgaaggaccgcgtaatcgatggc
acgccgtgtgggacagacacttatgacatctgtgttcaaggcctctgcaggcaagcaggc
tgcgaccacgtcctcaactcgaaggccaggaatgacaagtgcggagtgtgtggaggggac
aactcatcgtgtaaaactctggcagggacctttaacgatgcacagtatggttacaacaca
gtggtgcggatcccagctggagccaccaacattgatatcaaacaggtcagctactctgga
aagccagaagacgacaactacctcgcattatctgatagccagtccaacttcctcttgaat
gggaactttgtggtggccatgttcaaaagggaaatcaccttcaaaggaactgtcattgac
tacagcggctcggacacaaaagtagagcgcatcaactgcactgaacgcatcgaggaggaa
cttattctacaggtcttgtgtgtgggaaacctctataacccagatgtccgttactccttc
aacatacccatcgaggaacacagggagcagtttgtgtgggatccctcaggctcctggctc
gagtgcaaccgcatctgtcagggcgagcggaggcgaaaggcggtgtgtgtgcgcaagagt
gatcacctcgaggtatcggaccaacgctgtgaacatttacctcgtcctgttgctgttact
gagccctgcaacactgactgtgaagtcaggtggcatgttgctggaaaaagcgaatgttct
gctaaatgtggcccaggctaccgcagcctggatgttcagtgtatgaagtacagcctgatg
aagagacagagtgagaggatggaggccagcatgtgtggggacgttgcaaaacctcagacc
agagagccctgccatggggactgtctgctgaagaactggcagtacagtgcctggtcacag
tgctctaaaacatgcggacgtgggagccgtagcagagagtcttactgcatgaacaacctg
ggcagacggctggtagacagagagtgcaatgaataccagagggtggttaccgaaacctgc
aacgaccagccgtgtccgaagtggaccgtcagcgagtggagcgagtgcttagtgacttgt
gggaaagggatgagacacaggcaagtgtcctgcaccatgggagctggggaagaaaagctg
agtgagcacttctgtgacccgtccagcaaaccccaagccgtggggagctgcgagctgcct
gagtgtgcgtcctggcaggttggcgtctggggagcgtgtgcggtgacctgtggccacggc
taccagatgagagctgtgaggtgtgtgtcaggggactacggtgacacagtggatgacaga
gagtgcaatgctgcagcgagacccagagacagtcaggactgtgagatgccaggatgtcca
tgggcctctccggcacaaagcacacctcgtcctgacaactcagctcagctcctgactcag
tggagatatggctcctggactgcgtgctccgtgtcttgtggcaaggggaagcgggcgcgt
tatgtcagctgcagagatgcccagggaggagtggctgacgagtcatactgcgcccacctg
ccacggcccccggagtcctctgcctgcttcagcccatgtggccaatggcgtgccggggag
tggtcgccttgttcagtaacatgtggcatgggaagaaccaccagacaggtggtctgctct
aactaccaccagccagtggaccagtctttctgtgacctggaagaaaagcctgcaacagaa
caggagtgtaccgctgcaccctgtccctctatctaccatcgccagcgtatcaacgatcag
ccctatggatatccccaggacccaggacaccatcctgggcacagcagctggaatgtgcca
tcagcagacaaccagtggaggactggaccctggggcgcatgttccagtacctgtgcagga
ggcttccagaggcgagtggtggtctgtcaagacgctgatggacgcagcaacagctactgc
gacgagagagtcaaacccgccgagtccaagagctgtgactctggaccctgtcctctgtgg
aactatggtgtctggggagagtgtacccagacctgcggtggaggaaggaggactcgtctg
gtggtgtgtcagaggcccagtggtcagaggctcaacgactacaactgtgatgtcctggac
aagccgccagagatggagcaatgcaaccagcagccctgcccaggctctgcctcctggcac
cgccgaccatggaagccgtgttcagtgacttgtggtcgggggaccaagaagcgggagata
gcctgtgttcttcagaaccaaaccaaaatagaggaggagcactgcagtcatctgccacgg
ccgcgaacacagaaggcctgtcgggcgcggggatgccccacgtggaaagccaacaggtgg
agtgagtgttctgtcacctgtggagtcggagttcagagccgagatgtttactgcaggcta
aaaggcactgggtgggtcagagaggatctctgtgatgctcaccagcgccctgatgtagcc
cgaccatgccaaattgcagagtgcacacattactcttgggttgctggtgaatgggaagaa
tgtaatgcaacctgtggagaaggcatgagaagcaggaaggtggggtgtatgggcccaggg
atgacacccgtccaggacgattactgcaagccatcgtcccagcctcagtcacaccaaccc
tgcaagagagctccctgccactacatgtggatcacaggggagtggtcacagtgctctgcc
agctgtggtgttggctaccagcagcgtattgtctcctgctccgtgattccctcctcccag
gctgcgcacccgtacgctgctgctgctgctgctgctgctgctgcccagtcctcctctgcc
agcacccattgccccgagcctcaccctcctggcacccggccgtgcctcctcagggactgc
ccgcacacaacctactggaaagttggcccgtggagcaagtgctcacagacctgtggcgca
ggagtgatagagcgcagagtggagtgtgtgacctccaaaggacaaccatccaaacactgc
cgtccatcagaaagacctgagtctcaagctgcatgtcaagacagagaatgccagttgttc
gcttcctgccgagaggtccagatgagacagggtgtgaggatagatggggaatactatctc
aaagtcaagtcccggatcctacagatttactgtgctgagatgcagactgatttccccaag
gagtatgtgaccttgcgcagcggtcaaacagacaactactcagaggtgtatggacacagg
ctgctgaatcctttcgaatgcccgtacaatggcagccgaagacaagattgcaactgcagg
aatgactactcagcagcgggatacacactcttccacaaagttcgcctggacctcagctcc
ctgaggataatgatcacagacctccagttttcccagactctatttggtcgacctgtgccc
tttgcttcagcaggagattgttatagtgcagccaagtgtccacagggccagttcagcatc
aatctgattggcactggcctcaaagtggctgaggccaccaagtggacatcgcagggcaac
tatgtttctgtcaaagtccacagatctgaggacggaacaagaatctatggccgctgtggt
ggtttctgtgggaagtgcattccccaggctcacaacggcctactccttgaagtccactga
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integrated database retrieval system
