Lates calcarifer (barramundi perch): 108888603
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Entry
108888603 CDS
T04895
Symbol
flr
Name
(RefSeq) tetratricopeptide repeat protein 30A isoform X1
KO
K19683
tetratricopeptide repeat protein 30
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108888603 (flr)
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
108888603 (flr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
ANAPC3
TPR_14
TPR_16
TPR_1
TPR_CcmH_CycH
TPR_6
TPR_7
TPR_Slam
TPR_8
ARM_TT21_C
ComFB
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
108888603
NCBI-ProteinID:
XP_018540183
UniProt:
A0AAJ7PW22
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All DBs
Position
LG11:2412580..2423658
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AA seq
664 aa
AA seq
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MTAIKDGEYTATIYKLIKDGQYVEAIHILNGQLQKHTKSRAALSLLGYCYYHIQDFTNAA
ECYEQLTQLHPEVEEYKVYYAQSLYKAGAYPEATKASFVLDNPSSHTKMVKLQACIKYCE
EDYSAAKSLLEQLPQDDPDYVYNMGCLLYQDGKHEDACKKFMSAMQVLGYVPALSYNIAL
CYYSLKNYAQALKYIGEIIERGIREHPELSVGMTTEGIDVHSVGNTLVLHQTALIEAFNL
KAAIEYQLKNLKGAQEALTDMPPRSEEELDPVTLHNQALLNMDTKPSEGFEKLAFLLQQP
SFPPVTFGNLLLLYCKHEYFDLAADVLAENAHLTYKFLSPYMYEFLDALLTCQTAPEEAF
RKFDEMNAKLTEQLRKLAKQVQEARLARDDEAQKKALQDYDLMQEKYIVVLMAQAKIYWN
RENFQMVEKIFRKSVEVCNEDDTWKLNVAHVLFMQNKYKEAIGFYEPIVKKHYDNVEQCN
IQECPCKCKPSILNVSAVVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYDDPDKKVF
HLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYNKKLGTDTWFYAKRCFLSLLENMSKHM
VMLRDAVVQECIQFLEHCEVYGKEVPAIIEQPLDEVRIHIGKNTVTYEARLLKALFYEVI
GWNN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgacagctataaaagacggagagtacacggcgaccatctacaaactgatcaaagacggc
cagtatgtagaagcaattcacatcctaaacggccagcttcaaaaacacaccaagtccagg
gcagcgctgtctctgctgggctactgctactaccacatccaggacttcaccaacgctgca
gagtgctacgagcagctcacacagctgcacccggaggtggaggagtacaaggtgtactat
gcccagtccctgtacaaagctggtgcttatcctgaggccaccaaggcttcctttgtcctg
gataaccccagcagtcacaccaagatggtcaagctgcaagcctgtatcaaatattgtgag
gaagattactctgctgccaagtccctgttggagcagctgccccaggacgacccagactac
gtctacaatatgggctgtttgctttaccaggatggaaagcacgaagacgcctgcaagaag
ttcatgtctgccatgcaagtgctgggatacgtgccagcgttgtcctacaacatcgccctg
tgttactacagcctgaagaactacgctcaggcactcaaatacatcggagagatcatagaa
cgaggcatcagggaacatccagagctgagcgtcgggatgacgactgaaggcatcgacgtc
cacagtgtgggcaacacgctggtgctgcatcagacggctctgatcgaagccttcaacctc
aaagctgccatcgaataccagctgaagaacttgaaaggagcccaggaggctttgacagac
atgccccccagatcagaggaggagctggacccggtgactctccacaaccaggctctgctg
aacatggacacgaagccgtcagagggttttgagaagttggccttcctgctgcagcagccg
tccttcccccccgtcaccttcggaaacctgctgctgctttactgcaaacacgagtacttt
gacctggcagctgacgtcctggcagaaaacgcccatctcacctacaagttcctctccccg
tacatgtatgagtttcttgacgccttgttgacctgccagacggcaccagaggaggccttt
aggaagtttgatgagatgaacgccaaactgaccgagcagctacgcaaactggccaagcag
gtgcaggaggccaggctggctcgagatgatgaagcacagaaaaaagctctgcaggactac
gacctgatgcaggagaagtacatcgtggtcctgatggcccaggccaagatctactggaac
cgggagaacttccagatggtggagaagattttccgcaagtcggtggaggtttgtaacgag
gacgatacctggaagctgaacgtggcccacgtcctcttcatgcagaacaagtacaaggag
gccatcggcttctacgagcccatcgtcaagaaacactacgacaacgtggagcagtgtaac
attcaggagtgtccctgcaagtgcaaaccttcgatcctgaacgtcagcgctgtggtcctg
gccaacctgtgtgtgtcctacatcatgaccagtcagaacgaagaggctgaggagctgatg
aggaagatcgagaaggaggaggagcagatttcctacgacgaccccgacaaaaaggttttc
cacctctgcatcgtcaacctggtcatcgggacgctgtactgtgccaagggaaactacgac
tttggcatctctcgtgttatcaagagcctggagccgtacaataagaagctggggacggac
acatggttctacgccaagcgttgtttcctctctctgctggagaacatgtccaaacacatg
gtcatgctgagggacgctgtggtacaggagtgtattcagttcctggagcactgcgaggtc
tacgggaaagaagttccagctatcatcgagcagcctctggacgaggtccgcatccacatc
ggcaagaacaccgtcacctacgaggctcggctgctcaaggctctgttctacgaggtcatt
ggctggaacaactga
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