Lates calcarifer (barramundi perch): 108888659
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Entry
108888659 CDS
T04895
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108888659 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108888659 (washc5)
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Others
WASH complex
108888659 (washc5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
RSF
DUF3106
Motif
Other DBs
NCBI-GeneID:
108888659
NCBI-ProteinID:
XP_018540257
UniProt:
A0A4W6EG74
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Position
LG15:26852501..26864467
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AA seq
1159 aa
AA seq
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MVDFLAENNLCGQAILRIVSRGNAIIAELLRLSEFIPAVFRLKDKSDQQKYGDIICDFSY
FKGPEYYEGKLEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYIVDLNRYLDDLHEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQPGAKRPANYPESYFHRVPISSTFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFSPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
VEAWEPYKAAKTALNYTLDSANIKEQATRYATSMESLRPQVQQLLKEGFLREEIILDNIP
KLLNCLRDCNVAIRWLMLHSAESAYDPNNKRLRQIKDQVLNDSKYNPKILFQLLLDTAQF
EFTLKEMFKQMLSEKQIKWESYKKEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQANSADLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLDKDK
LKDYSQLGARYEVAKLTHDISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAY
ALHKGLIFNPKSKPSELMPKLKDMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSVYQSTHIPIPKFPSVDESATFIGRLCREILRITDPKTTCYI
DQLNTWYDLKSHQEVTNNRLFSEIQNTLGTFGLNGLDRLLCFMIVKELQNFLTMLQKTIL
KDKAVVDVFKAMLGAVNPIQGIVANASKVYASAVTKTQKIWGGYLEAIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPSLPYPKEDNTLLYEITAYLEAA
GIHNPLNKIYITTKRLPYFPIINFLFIIAQLPKLQYSKNQGMTCRKAADPIDWPPLVLGL
LTLLKQFHSRYTQQFLALIGQFIRSIMEQCTSQKIPDMPSDVVGALMFLEDYVKYTKLSR
KVAEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggactttctggcggagaacaacttgtgcggccaggccatcctcaggatagtttcc
agaggaaatgccatcatcgctgagctcctgcgtctctctgaattcatccctgcagttttc
aggctcaaagacaaaagtgaccagcagaaatatggagacattatctgtgacttcagctac
ttcaagggcccagagtattatgaggggaagttggaagccaaacctgagcttcaagacctg
gatgaagagtttagagagaacaacattgagattctatcaaggttctatctggcttttgag
agtgtccacaaatatatagtggatcttaacagatatttagatgacctacatgagggtgtt
tatattcagcagactctggagactgtgcttctaaatgaggatggaaaacaacttctatgc
gaggctctctatctttacggagtcatgttgctggttattgaccaaaaaattgaaggggag
gtcagagagaggatgcttgtttcctactatagatacagtgccgcccgttcatcagctgac
tccaaccttgatgacatctgcaagctcctccgcagcaccggttactccagccagcctgga
gccaaacgaccagcaaactacccagagagctacttccacagggttcccattagttccact
tttattagcatggtcattgggaggctgcgctctgatgacatctacaaccaagtgtctgcg
taccctctaccagagcatcgtagcacggcactggctaaccaggcagccatgttgtatgtc
tgcctttacttcagcccttccatactgcacacccagcaggccaagatgagagagatagtg
gacaagtacttccctgacaactgggttatcagtatctacatggggatcacagtgaacctg
gtggaggcctgggaaccatacaaagctgccaagactgctctcaactacaccctggactct
gctaacatcaaggaacaggctactagatatgcaactagcatggagagcctgaggcctcag
gtgcagcagctgcttaaggaaggtttcctgagggaggagatcatcctggacaacattcct
aaactgctcaactgtctgagggactgtaacgttgctatccgctggctgatgctgcactct
gcagagtcggcctatgacccaaacaacaagcgactgcgtcagatcaaagaccaagtgctc
aatgactccaagtacaacccgaagatcctgttccagcttctgctagacacagctcagttt
gagttcacactcaaagagatgttcaagcagatgctgtcagagaagcagatcaaatgggag
agctacaagaaggagggatcagagagaatgactgagctggctgaagtcttctctggcgtc
aaaccgcttaccagggtggagaaaaatgagaacttacaagcctggttcagagaaatctca
aagcagatcgagtctttgaactatgaggactctacagctgctgggaggaagacagttcag
ctcatacaggctcttgttgaggtccaggagttccaccagttggagtctaacctgcaggtt
tgtcagttcttggctgacaccaggaagttcttgcaccaaatgatccgcaccattaatatc
aaagaagaagtcctcattaccatgcagatagttggtgacttgtcctacgcatggcagata
attgacagcttcacatccattatgcaggagagcatcagagtcaatccatccatggtcaca
aaactgagagctacatttctgaagttggcatctgcactggatcttccattgctccgcatc
aaccaggccaacagtgctgacctgctgagcgtttcacagttctactctggggaattggtg
gcttatgtcagaaaggtgcttcagatcattccagagagcatgttcacctctctggccaag
atcatcaagcttcagatccatgacatcatggaagtgcccacacggctggataaggacaag
ctaaaggactactcccagctcggagctcgctatgaggtggctaaactcactcatgacatc
tctattttcactgagggcatcctgatgatgaagacaactctagttgggatcattaaggtg
gatcctaagcagctcctggaggatggcatcaggaaggagctggtgaagagggtggcttat
gccttgcacaaaggtttgatcttcaaccccaagtctaagcccagtgagctgatgccaaag
ttgaaggacatggcggccaccatggatggtttctacaggtcgtttgagtacatccaagac
tacgtcagcatttatggccttaaaatctggcaggaggaagtgtcacgcataatcaactac
aatgtggaacaggaatgcaacagcttccttaggaccaagatccaggactggcagagtgtg
taccagtccacccacatccctatccccaagtttccctctgtggatgagtctgccactttc
attggtcgtctctgcagagagatcctccgaatcactgatccaaagacaacgtgttacata
gaccagttgaacacctggtacgacctgaagagccaccaggaagtgaccaacaacaggcta
ttctctgaaatccagaacactctgggtacatttggcctcaatggactggaccgtctgctc
tgcttcatgattgtcaaggagttgcagaacttcctgacaatgcttcagaagaccatctta
aaggacaaggcagtggtggatgtctttaaagcaatgctgggtgctgtcaacccaattcag
ggaattgtggctaatgccagcaaagtgtacgccagtgcagtgaccaaaacacagaagatc
tggggcggatacttggaggcaatcatgaaggttggtcagatgcagattctcagacagcag
attgctaatgagctgaactactcctgcaagtttgactccaaacacctggctgctgccctg
gaaaacctcaacaaatctctgctggcagacattgaagcgcactaccaggatccatccttg
ccctaccctaaagaggacaacactcttctgtatgagatcactgcctatctggaggctgct
ggcattcacaacccactcaacaagatctacatcaccaccaagcgcctaccttactttcct
atcatcaacttcctatttattattgcccagctgcccaaacttcagtacagcaaaaaccaa
ggaatgacctgcaggaaagccgcagacccaatcgactggcctcccctagtactcggtctg
ctcactctcctcaagcagttccactccagatacacacaacagttcttggctctcattggt
cagttcatccgctcaatcatggagcagtgcacaagtcagaagatacctgacatgccctct
gatgtggtgggagctctgatgtttctggaagactacgtgaagtacacaaaactgtcacgc
aaggtggctgaagcccatgtgcccagtttcatttttgatgagttcagaacagtactgtga
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