Lates calcarifer (barramundi perch): 108888692
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Entry
108888692 CDS
T04895
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108888692 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108888692 (nup62l)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108888692 (nup62l)
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG2
DUF4164
Motif
Other DBs
NCBI-GeneID:
108888692
NCBI-ProteinID:
XP_018540310
UniProt:
A0A4W6FVY7
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Position
LG1:18200575..18202950
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AA seq
551 aa
AA seq
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MSGGFNFGQPSTGFTFGAQKTTTAASATGFGLTSSAPAASGGGFTFGTPTQPNSNATGGF
SFGTPAKSTAAGGGFSFGTPTTSFGLGTAPQTTTAAAGLTLGSTAAPTAGSGFTLGGGLS
AQTSASAPAGGGFTFGTAPQAQTQLAPAATIAPAATTAAGGLSFGAFSFGATKVQATTAA
ASTAPTGGGFSFGASAPSTLTLGSQPQPAPTAAATTVQGGGFTFGIKPSSTPAPPASTQS
APASGPSLFATPITTTAATVPATGSGFTLGAAAPTPAASTAPATTTAAGGGMPFMLKPLG
PVTATSTSAPASTATTAPATTGVATGFTLGLKPVSSTSTTTTTAATTITTTTAPPVMTYA
QLEGLINKWSLELEDQERHFLQQATQVNAWDRMLVENGEKITSLHKEMEKVKLDQRRLNQ
ELDFILSQQKELEDLLCPLEESVKEQSGTIYMQNADEERERTYKLAENVDAQLKRMSQDL
KEIIEHLNTSSGPADTSDPLQQICKILNAHMDSLQWIDQNSVLLQRRVEEVSKLCDNQRK
EQEKTFRLTFD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgggtttaacttcgggcagccctctacgggcttcactttcggagctcagaag
accacaaccgcagcctccgccaccggttttgggctgacaagctccgcacctgcagcctca
ggaggaggcttcaccttcggcactcccacccagcccaactccaacgctaccggcggtttt
agcttcggtaccccggcgaagagcacagcagccggcggaggcttctcatttgggaccccc
accacctcctttggtctgggtacggctcctcaaaccacgacagcggcagcagggttgact
ttaggctccacggcagctccaactgcggggtcagggttcaccctgggcggcggtttgtcc
gcacagacaagcgcttccgcccctgcaggtgggggtttcacctttgggactgctcctcag
gctcaaacccaacttgctccagcagcaacaatcgcaccagcagcaacgacagcagcaggc
ggcctctcgtttggagctttcagctttggagctacaaaggtccaggcgaccacagctgca
gcatctactgctcccacaggaggaggcttcagctttggcgccagtgctccctccaccctc
accttaggctcccagcctcagccagcccccacagctgcagccacaacggtgcagggtgga
ggatttacctttgggattaaaccttcatcaaccccagctcctcctgcatctacccagtca
gccccagcttcaggtccctctctctttgcaacacccatcactacaactgctgctactgtc
cctgcaacaggttcaggatttactttgggtgcagcagctccaactccagcagcaagcact
gctcctgcaacaaccacagcagctggtggaggtatgcctttcatgctcaaacctctgggg
ccagttactgccacctccacatctgcccctgcctctactgccacaactgcacctgccaca
acaggtgttgctacaggcttcacactgggactcaaacctgtatccagcacaagtaccaca
acaactactgcagccacaacgataactacaaccacggctcctccagtgatgacctatgct
cagctagagggcctcatcaacaagtggagtcttgagcttgaggaccaagagagacacttc
ttacagcaggcaactcaggtgaacgcctgggaccgcatgctggtggagaatggagagaag
atcacgtccctgcataaggagatggagaaggtgaagctggaccagaggaggctgaaccag
gagctggatttcatcctgtcccaacagaaggagctggaggacttactgtgcccactcgag
gagtcagtgaaagagcagagcggaaccatctacatgcagaacgcagacgaggagcgtgaa
agaacgtacaagcttgcagagaacgtggatgcgcagctgaagaggatgtcacaagacctg
aaggagatcatcgagcacctcaacacatccagtggccctgcagacaccagtgatccactt
cagcagatctgtaaaatcctcaacgcccacatggattcacttcagtggattgatcagaat
tcagtcctcctgcagagacgagtggaggaggtgtccaaactgtgtgacaaccagcgcaag
gagcaggagaaaacctttcgcttaacatttgactga
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