Lates calcarifer (barramundi perch): 108888704
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Entry
108888704 CDS
T04895
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00260
Glycine, serine and threonine metabolism
lcf00270
Cysteine and methionine metabolism
lcf01100
Metabolic pathways
lcf01200
Carbon metabolism
lcf01230
Biosynthesis of amino acids
Module
lcf_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108888704
00270 Cysteine and methionine metabolism
108888704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108888704
Enzymes [BR:
lcf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
108888704
1.1.1.399 2-oxoglutarate reductase
108888704
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108888704
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Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
T3SS_SCTL
Ish1
Motif
Other DBs
NCBI-GeneID:
108888704
NCBI-ProteinID:
XP_018540329
UniProt:
A0A4W6FMB4
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Position
LG1:complement(18502365..18508375)
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AA seq
528 aa
AA seq
DB search
MAPISIKTVLVSESVDPRCRAILEENGIRVTEKQNMKKDELIAEIKDYDGLVVRSATKVT
ADVINAADNLKIIGRAGTGVDNVDVDAATKKGIIVMNTPSGNTISAAELTCALLMSLSRN
VPQAAMSMKQGNWDRKKFMGAELYGKVLGIVGLGRIGKEVASRMQSFGMKTIGYDPITPP
EVSASWGVEQMSLEQLWPQCDYITVHTPLMPSTVGLLNDETFAKCKKGVKVVNCARGGII
DEAALLRALESGQCGGAGLDVFVEEPPKDRSLVDHPNVISCPHLGASTKEAQARCGEDIA
LQIVDMVKGERLVGAVNAQVLASTFSQESHELIKLGEAVGAVLQSCTASKKPFSQIQITT
LGDCMKSSTGYMTSAVMVGLLNQESGCCPNLINVLSLAKESGITVNQAHCASDSTAGVCR
VEILANGCGYKASGSVQGGVPVLLELSDSVFRQPVSLVGNLLFFKASASPQLLSSVAGLL
ATEGVEIESFSAPSERTGDLWYCVGVSSLLRDLSILKPLVKEAAQLAV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccccgatctccatcaagactgtgttagtcagtgaaagtgttgaccctcgctgcagg
gcgattctggaggaaaatggcatccgagttacggagaaacagaatatgaaaaaggatgaa
ttgatcgcggagataaaggactatgatggccttgtggttaggtctgcaactaaggtaaca
gctgatgttatcaatgctgctgataatctcaaaatcattgggagagctgggaccggtgtg
gacaatgtggatgttgatgctgccaccaaaaagggtattattgtcatgaacactccaagc
ggaaacacgatcagtgccgcagagctgacatgtgccctgttgatgagcctctcaagaaat
gtgcctcaagctgcgatgtcgatgaaacaagggaactgggatcgcaaaaagttcatgggt
gcagagctatacggcaaagtgcttggaatagttggacttggaagaataggcaaagaagtc
gcttcaagaatgcagtcgtttggcatgaagactatcggctatgatccaatcactcctcct
gaggtgtcagcgagctggggggtggagcaaatgtccctggagcagctttggccccagtgt
gactatatcacagtccacactcctctaatgccctctactgttggtctgcttaacgatgaa
acgtttgctaaatgcaagaaaggagtaaaggtcgtgaactgtgcacgaggaggtatcatc
gatgaggctgctctcctcagagctttggagtccgggcagtgtggaggagcagggctcgac
gtctttgtcgaggagccacctaaggaccgctcactggtggaccatcccaatgttatcagc
tgtcctcacctgggagccagtaccaaggaggctcaggcgcgctgtggggaggacatcgcc
ctgcagattgtggacatggtgaagggagagagactggtgggagcagtaaacgcgcaggtt
ttggcgagcaccttctctcaggaatctcacgaactgattaaactcggagaggctgttgga
gctgtgctgcaatcgtgcaccgcttcaaagaaaccattcagtcagatccaaataaccact
ctaggtgactgcatgaagtcctccactggttacatgacttcagcagtgatggttggactg
ctgaatcaagaatctggctgctgcccaaacctcatcaacgtactgagcctagccaaggag
tctggaatcacggtaaaccaagcccactgtgcatctgacagcactgctggagtgtgcagg
gtggagatcctggccaacggctgcggctacaaagccagtggttcagttcaaggtggtgtg
ccggtcctgctggagctgagtgacagcgttttcagacaaccggtctctctcgttgggaat
ctgctgttcttcaaagcctctgcgagtcctcagctcctgtcctcagtggctggactgctg
gccacagagggagtggagattgagtctttcagtgctccctcagagcgcaccggggatctg
tggtattgtgtgggggtgtcctctctcctacgagacctcagcatcttgaagccgttggtt
aaggaggccgcgcagctcgccgtttaa
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