KEGG   Lates calcarifer (barramundi perch): 108888727
Entry
108888727         CDS       T04895                                 
Name
(RefSeq) aprataxin and PNK-like factor
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108888727
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     108888727
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     108888727
SSDB
Motif
Pfam: zf-CCHH FHA_2 FHA
Other DBs
NCBI-GeneID: 108888727
NCBI-ProteinID: XP_018540366
UniProt: A0AAJ7V894
LinkDB
Position
LG5:627978..637431
AA seq 475 aa
MSGFDLVPVDGGGPVHLPPGETVLGRGPLLGVSDKRVSRHHGLLENLNGQLRLKPTHLNP
CFFQSSLTDDPRPLKRDSWYPLHHGDFFSLLPGQFIYKVVAVGGEESTPSNSQEFEGEEK
EEVPSPPEPDVEPDHPVRPDRERTPSHEEPTLAALSNEEEEEGSLNKGDSAPQREVKNYH
NNVAKPAIKKRVLPAWMMVAAAAPSSSSSSPKVQSTVKRRKTPAAAKQATPTVTSAPEEA
ELSEKEEEERPRKKRRKDVSSEKPSVRCQGGSNRSEVSDESDNFTMEVEEEGKGGETSTA
DRNSQTPTSEVSSEKKSTNGRQTTKRAELNSSSASKPRLRTPCPYGKDCYRKNPVHFQEC
SHPGDTDYDEEEEEEEADRPECPYGTDCYRKNPLHRKEFKHTKKPARSKRTVPKKRPDDN
EDEDEDLGDDDSFINDDSEDVGDDSDYVPPESDDSGKEDIRRLQEEAKGFLKRRK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtccggcttcgacctggtcccggtggacggcggcggcccggtccacctgccgccgggg
gagacggtgctgggcaggggcccgttactgggagtcagtgataagagagtgtccagacac
cacgggctgctggagaacctgaacggacagctgcgactcaaacccacccacctgaacccg
tgcttctttcagtcgtccttgaccgacgaccctcgacctctgaagagagactcctggtac
cctctccatcacggagacttcttctctctgctgccggggcagttcatctacaaggtggtg
gccgtgggtggagaagagagcactcccagcaacagtcaggaatttgaaggagaagaaaag
gaggaagttcccagtcctccagagccggatgtggaaccagatcatccagtaagaccagac
cgagaacggacgccatctcacgaggagccgacgttagcggctctgtcgaacgaggaggag
gaggaaggaagtttaaataagggagactcagctcctcagagggaagtgaagaattatcac
aacaacgttgctaagcctgcaatcaagaaaagagttttacctgcgtggatgatggtggcg
gcggcggctccaagcagttcgtcctccagccccaaagttcagtcgactgtgaagagacgt
aaaacacctgcagcagccaaacaggccacgcccactgtgacctctgcacctgaggaggcg
gagcttagtgagaaggaggaggaggagaggccgaggaagaagaggaggaaggacgtctcc
tcagagaaaccatcagtccggtgtcagggcggatccaacagatctgaggtcagcgacgag
tctgacaacttcaccatggaggtggaggaggagggaaaaggaggagaaacgtccacagcc
gacagaaactcccagacaccgacatctgaagtcagctctgagaagaagtcgacgaacgga
cgacaaacgactaaacgagcggagttgaacagtagctcggcgtccaaacctcgactcagg
acgccatgtccgtacgggaaggactgctacaggaagaacccggtccatttccaggagtgc
agtcaccccggtgacaccgactatgatgaggaggaggaggaggaggaggcagaccgacct
gagtgtccctacggcactgactgctacaggaaaaatcctcttcacaggaaggaattcaaa
cacacaaagaaaccagctcgctccaaacgcaccgtccccaaaaagaggcctgatgacaat
gaagacgaggacgaagacctcggggacgacgacagcttcattaatgacgacagcgaggac
gtgggcgatgactcagactacgtccctcctgagtcagacgacagtgggaaggaggacatc
agacggctgcaggaggaagcaaagggcttcctgaagaggaggaagtag

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