Lates calcarifer (barramundi perch): 108888749
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Entry
108888749 CDS
T04895
Name
(RefSeq) carbohydrate sulfotransferase 12-like
KO
K04742
chondroitin 4-sulfotransferase 12 [EC:
2.8.2.5
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108888749
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108888749
Enzymes [BR:
lcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.5 chondroitin 4-sulfotransferase
108888749
Glycosyltransferases [BR:
lcf01003
]
Unclassified
Sulfotransferases
108888749
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_2
DUF4078
Motif
Other DBs
NCBI-GeneID:
108888749
NCBI-ProteinID:
XP_018540385
UniProt:
A0AAJ7V8E1
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Position
LG14:5742919..5746724
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AA seq
323 aa
AA seq
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MAACRGLLLPLGFLGSMFLIMLYFYQWDMSQEKRAERMRQLQELRKQLLKEICASNKEAF
SGGKHSLEDISAKNLKNLIVDDTHGIIYCYIPKVACTNWKRVMFVLNQNEPYHDPMSISA
DMVHSANKLTLLNSFPRTEMKARLRHYTKFLFVRDPFVRLISAYRDKFQRYNKYFYVKFA
RDILRLYGNQSEPPQTVDEAFASGVHLSFYNFIQYLLDPRTEKKEPFEPHWRQMHRLCHP
CLIQYDFVGHQETLQEDAEQLLAILKLQDDIKFPPSYANMTSPASVLDWFRTVPLEDRRK
LYQIYEGDFRLFGYRKPGELLDG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatgcagaggactcctgctgcccctcggatttcttggatccatgtttctcatc
atgttgtacttttatcaatgggacatgtcacaagaaaagagagcagagaggatgcgtcag
ctgcaggaactgagaaagcagctcctaaaagaaatctgcgctagtaacaaagaggccttt
tctggagggaagcacagtttagaagacattagtgccaaaaacctgaagaatctcattgtg
gatgacactcacggcatcatctactgttacattcccaaggtggcatgcaccaactggaag
agggttatgtttgtcctgaaccagaacgaaccatatcatgaccccatgtccatatctgct
gacatggtccacagtgctaacaagctcactcttctaaacagcttcccaaggacagagatg
aaggcaaggctgaggcactacaccaagttcctgtttgtccgggacccatttgtccgtctc
atctccgcctacagagacaaattccagcggtacaacaagtacttctacgttaagtttgcg
cgggacattctgcgtctctatggcaaccagtctgagccaccgcaaactgtggacgaggcg
tttgcatcaggcgtgcacctctctttttacaactttattcagtacctactggacccacgg
acagagaagaaagagccctttgaaccccactggaggcagatgcaccgcttgtgccacccc
tgcctcatacagtatgatttcgttggccatcaggagactcttcaggaggatgctgaacag
ctgctggcgatcttaaagttgcaggatgacatcaagttccccccttcctatgcaaacatg
acgtcccctgcttctgtgttggattggttcagaacagtgcccctagaggacaggagaaaa
ctgtaccagatctatgagggggacttcagactttttggctacagaaagccaggtgaattg
cttgatggttga
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