KEGG   Lates calcarifer (barramundi perch): 108888751
Entry
108888751         CDS       T04895                                 
Symbol
dctn1a
Name
(RefSeq) dynactin subunit 1 isoform X1
  KO
K04648  dynactin 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04814  Motor proteins
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    108888751 (dctn1a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108888751 (dctn1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108888751 (dctn1a)
   03036 Chromosome and associated proteins [BR:lcf03036]
    108888751 (dctn1a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108888751 (dctn1a)
Membrane trafficking [BR:lcf04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    108888751 (dctn1a)
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     108888751 (dctn1a)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     108888751 (dctn1a)
SSDB
Motif
Pfam: Dynactin CAP_GLY Lipase_GDSL_2 DUF7259
Other DBs
NCBI-GeneID: 108888751
NCBI-ProteinID: XP_018540388
UniProt: A0A4W6EH97
LinkDB
Position
LG14:5599751..5612147
AA seq 1246 aa
MSSTGTVESGKPPKIGSIVEVTGKGQRGTVAYIGATLFASGKWVGVILDEPKGKNDGTVQ
GKRYFTCEENHGIFVRQSQIQVVEEGSSATSPDTPESGTAKTLRQKDIPETPKTSKQTPG
NVKKSSTRRSAKASRESLSSSLSGDVSEVSLSSHQGALGAPVVPQPSGSPAAAAAPVPAT
PSKVEPAISKQEEESLRAQVKDLEEKLETLKMKRTEDKAKLKELEKHKIQLEQLQEWKTK
MQEQQAELQKQLKEAKREAREAQEAKDRYMEEMSDTADAIEMATLDKEMAEERAESLQVE
VDTLKEKVEELSMDLEILRHEISEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLSASE
KQEHVKLQKQMEKKNTELETLRTQKEKLQEEVKQAEATIDELKEQVDAALGSEEMVETLT
ERNLDLEEKVRELRETVTDLEAINEMNDELQENARETEMELREQLDLSGAKVREAEKRVE
AAQETVADYQQTISKYRDLTARLQDANRELISQQNANAEQVQQPPAELFDFKIKFAETKA
YAKAIEMELRKMEVAQSNRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISK
QAQEKFDLNGNLVQGTGLRGSPGEQRSFASGLVYSLSLLQATLHKYEQALNNCNVEIFKR
MGTLYSEMSFHERSLDYFIDLLHKDQLDETVQVEPLTKAIKYYQQLYSVHLADQTEDCTV
QLADHIKFTQSALDCMGVEVARLRAFLTAGQESSGLSVLLKDLDTSCSDIRQFCKKIRRR
MPGTDVVGVPAALDFGPQVSETLTECRRQLTRVVAVLQEVAAAGAQMVAPLAEQEGLNAL
KLEDIACKAVEQVYGAHGLNGPECLRQSCSSVIATMNKMATAMQEGEYDADKPQGKTPPV
EIRAATVRAEMTDAEGLGVKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDTST
KDADERVEKIQTKLDENLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRINNQSKMT
IEGLRGSPASGIASIVQGSAGGLPPSMAGPVQVVDSPLLRQQVEAQRLGIKHLKNQNNRL
KAEKMRAQLASLPPLCPPKLPQVSKESSMPPEGLNTGIYRRTDQLLATLLKLSAEFKVVD
ITGKTAVSASAQLLEQTARLQNLSDALDKLKGEVAEHVVSYQPGAKASSDFATFPASSFV
KAKEEKQGGTVFVGRVSIPCTRGQEQVHRLVLSQQQLQKVHRLLMS
NT seq 3741 nt   +upstreamnt  +downstreamnt
atgagcagcacaggaacagtggagagtggtaaacctccaaagattggctctatagtagag
gtgacagggaagggtcagcgtggcaccgttgcctacatcggcgccaccctctttgcctct
gggaaatgggtgggtgtcatactggatgaacctaaaggcaagaatgatggcaccgtgcag
gggaaacgctacttcacctgtgaagaaaatcatgggatatttgtcagacagtcccagatc
caggtagtggaagagggctccagtgccacctcaccagatactcctgagagtggcactgcc
aagacactccgacagaaagacattccagagactcccaaaacatccaaacagacaccaggg
aatgttaagaagtcttctacccgccgctctgctaaggcatcacgtgagagtctgtcgtcc
tctctgtctggtgatgtcagtgaggtgagtctgtcctcccatcagggtgcactgggagct
cccgtcgtgcctcagcccagcgggtcacctgcggcagctgcagccccagtcccagctact
ccaagcaaggtggaacctgccatttccaagcaggaggaggaatccctgcgggctcaggtc
aaggacctggaggagaagctggagacactgaaaatgaagcggacagaggacaaggccaaa
ctgaaggagcttgaaaaacacaagatccagctggaacagcttcaagaatggaagaccaaa
atgcaggagcagcaggccgaactgcagaaacaactcaaagaggccaagagggaagcccgt
gaggcacaggaggccaaggaccgctacatggaagagatgtcagacacggcagatgccatt
gagatggcaacactggacaaagagatggctgaggagcgggcagagtcattgcaagtggaa
gtggacacgctgaaagagaaagtggaggagctctccatggacctggagatccttagacat
gagatttcagagaaaggctcagatggagctgcctcaagctaccatgtcaaacagctggag
gagcagaacagcagactgaaggaggcactggtcaggatgcgtgacctgtctgcttcagag
aaacaggaacatgtgaagctgcagaagcagatggagaagaagaatactgagctggagaca
ctgaggactcagaaggaaaaactacaggaagaagtcaagcaggcagaggccacgatcgat
gaactgaaagagcaggtggatgctgctctggggtcagaggagatggttgagaccctgaca
gagagaaacctcgacctggaggagaaagtcagagagctgagagaaacagtcactgatttg
gaagcaatcaatgaaatgaatgatgagctccaggagaatgcgcgggagacagaaatggag
ctgagagagcagctggacctgagtggtgcaaaggtcagagaggctgaaaaaagggtggag
gctgcccaggagactgtcgctgattaccagcagaccatcagcaaatacagagacctcacc
gccaggctccaggatgccaatagggagctgatcagtcagcagaatgccaatgctgaacaa
gttcagcaaccacctgcagaactatttgacttcaagatcaagtttgcagagaccaaggcc
tatgccaaggccattgagatggagctgaggaaaatggaagtggctcagtcaaacagacag
gtgtccctcctcacctccttcatgccagactccttcctccgacatggtggagatcacgac
tgtatactggtccttctactcattcccaggctcatctgcaaggccgagctgatcagcaaa
caggcccaggagaagtttgacttgaatgggaacctggtgcaggggacggggctcagaggg
tctccaggagaacagcgcagttttgcctcaggactggtctactccctcagcctgctgcag
gccactctgcacaaatatgaacaggctctgaacaactgcaacgtggagatttttaagcgc
atgggtacactttactctgaaatgagcttccatgagcgctccctggattatttcattgac
ctgctgcataaagaccagctagacgagactgttcaggtggaacccctgactaaggccatc
aagtattatcagcaactgtacagcgtccatctggcagatcagactgaggactgcacagtg
cagctggctgaccacatcaagtttacccagagtgccctggactgtatgggagtggaggtc
gctcgtctgcgggcgttcctgacagcaggtcaggagagttctggcctatctgtgcttctt
aaggacctggacacttcttgctctgatatcagacagttctgtaagaagatccgccgtcgc
atgcctggaacagatgtggttggagtacctgctgctctcgattttggaccacaggtgtca
gagacgctgacagagtgcaggcgccagctgacccgtgtggtggccgtgctgcaggaggtg
gctgcagctggagctcagatggttgctccactggcagaacaggagggtctcaacgctctc
aaactggaagacatcgcctgcaaggctgtggagcaggtatatggtgcccatggcctgaat
ggcccagagtgtctgcgtcagtcctgcagctccgtcattgctactatgaacaagatggct
acagccatgcaggaaggagagtatgatgctgacaaacctcagggaaagaccccccctgtg
gagataagagcagccactgtcagggccgagatgactgatgctgagggtctaggagttaaa
ctagaagacagagagacagtcatcaaggagcttaagaaatctcttaagatcaagggtgag
gagctgagtgaggccaatgtccgcctgagcctgctggagaagaagctggacacctccacc
aaagatgcagatgaacgggtggagaagattcagaccaaactggacgagaatcttgccctg
ctgaagaagaaagaaaaggagtttgaggagacaatggatgctctgcaggctgatatcgac
caactggaggcagagaaggcagagctgaaacaacgcatcaataaccaatcaaagatgacc
attgaaggcctgagaggctcacctgcctctggcattgcctccattgtccagggatctgca
ggaggtctgcctccatccatggcagggccggtgcaggtggtggactcccctctcctcagg
cagcaggttgaggctcagagactaggcattaaacatctcaagaatcaaaacaacagactc
aaggcagagaagatgagagcccagctggcctccctgcctccactctgccctcccaaactg
ccacaagtgtccaaagaaagctccatgcctccagagggactaaacacaggcatctatcgc
aggactgaccaactgctggcaacactgctcaagctgagtgcagagtttaaagtggtggac
atcacagggaagacagcagtcagtgccagtgcccagttacttgagcagacggctcgactg
cagaacctcagtgatgctctggacaaactcaagggagaagtagccgaacatgtagtctca
tatcagcctggagcaaaggcatcctctgactttgccaccttcccagcatcctcctttgtt
aaggccaaggaagagaagcagggaggaacagtgtttgtaggtcgtgtttccattccatgc
acccgcggacaggaacaagtccaccgcctcgtcctatcacagcagcagctgcagaaagtg
caccgcctccttatgtcataa

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