Lates calcarifer (barramundi perch): 108888751
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Entry
108888751 CDS
T04895
Symbol
dctn1a
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04814
Motor proteins
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108888751 (dctn1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108888751 (dctn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108888751 (dctn1a)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108888751 (dctn1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108888751 (dctn1a)
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108888751 (dctn1a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
108888751 (dctn1a)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
108888751 (dctn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Lipase_GDSL_2
DUF7259
Motif
Other DBs
NCBI-GeneID:
108888751
NCBI-ProteinID:
XP_018540388
UniProt:
A0A4W6EH97
LinkDB
All DBs
Position
LG14:5599751..5612147
Genome browser
AA seq
1246 aa
AA seq
DB search
MSSTGTVESGKPPKIGSIVEVTGKGQRGTVAYIGATLFASGKWVGVILDEPKGKNDGTVQ
GKRYFTCEENHGIFVRQSQIQVVEEGSSATSPDTPESGTAKTLRQKDIPETPKTSKQTPG
NVKKSSTRRSAKASRESLSSSLSGDVSEVSLSSHQGALGAPVVPQPSGSPAAAAAPVPAT
PSKVEPAISKQEEESLRAQVKDLEEKLETLKMKRTEDKAKLKELEKHKIQLEQLQEWKTK
MQEQQAELQKQLKEAKREAREAQEAKDRYMEEMSDTADAIEMATLDKEMAEERAESLQVE
VDTLKEKVEELSMDLEILRHEISEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLSASE
KQEHVKLQKQMEKKNTELETLRTQKEKLQEEVKQAEATIDELKEQVDAALGSEEMVETLT
ERNLDLEEKVRELRETVTDLEAINEMNDELQENARETEMELREQLDLSGAKVREAEKRVE
AAQETVADYQQTISKYRDLTARLQDANRELISQQNANAEQVQQPPAELFDFKIKFAETKA
YAKAIEMELRKMEVAQSNRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISK
QAQEKFDLNGNLVQGTGLRGSPGEQRSFASGLVYSLSLLQATLHKYEQALNNCNVEIFKR
MGTLYSEMSFHERSLDYFIDLLHKDQLDETVQVEPLTKAIKYYQQLYSVHLADQTEDCTV
QLADHIKFTQSALDCMGVEVARLRAFLTAGQESSGLSVLLKDLDTSCSDIRQFCKKIRRR
MPGTDVVGVPAALDFGPQVSETLTECRRQLTRVVAVLQEVAAAGAQMVAPLAEQEGLNAL
KLEDIACKAVEQVYGAHGLNGPECLRQSCSSVIATMNKMATAMQEGEYDADKPQGKTPPV
EIRAATVRAEMTDAEGLGVKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDTST
KDADERVEKIQTKLDENLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRINNQSKMT
IEGLRGSPASGIASIVQGSAGGLPPSMAGPVQVVDSPLLRQQVEAQRLGIKHLKNQNNRL
KAEKMRAQLASLPPLCPPKLPQVSKESSMPPEGLNTGIYRRTDQLLATLLKLSAEFKVVD
ITGKTAVSASAQLLEQTARLQNLSDALDKLKGEVAEHVVSYQPGAKASSDFATFPASSFV
KAKEEKQGGTVFVGRVSIPCTRGQEQVHRLVLSQQQLQKVHRLLMS
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacaggaacagtggagagtggtaaacctccaaagattggctctatagtagag
gtgacagggaagggtcagcgtggcaccgttgcctacatcggcgccaccctctttgcctct
gggaaatgggtgggtgtcatactggatgaacctaaaggcaagaatgatggcaccgtgcag
gggaaacgctacttcacctgtgaagaaaatcatgggatatttgtcagacagtcccagatc
caggtagtggaagagggctccagtgccacctcaccagatactcctgagagtggcactgcc
aagacactccgacagaaagacattccagagactcccaaaacatccaaacagacaccaggg
aatgttaagaagtcttctacccgccgctctgctaaggcatcacgtgagagtctgtcgtcc
tctctgtctggtgatgtcagtgaggtgagtctgtcctcccatcagggtgcactgggagct
cccgtcgtgcctcagcccagcgggtcacctgcggcagctgcagccccagtcccagctact
ccaagcaaggtggaacctgccatttccaagcaggaggaggaatccctgcgggctcaggtc
aaggacctggaggagaagctggagacactgaaaatgaagcggacagaggacaaggccaaa
ctgaaggagcttgaaaaacacaagatccagctggaacagcttcaagaatggaagaccaaa
atgcaggagcagcaggccgaactgcagaaacaactcaaagaggccaagagggaagcccgt
gaggcacaggaggccaaggaccgctacatggaagagatgtcagacacggcagatgccatt
gagatggcaacactggacaaagagatggctgaggagcgggcagagtcattgcaagtggaa
gtggacacgctgaaagagaaagtggaggagctctccatggacctggagatccttagacat
gagatttcagagaaaggctcagatggagctgcctcaagctaccatgtcaaacagctggag
gagcagaacagcagactgaaggaggcactggtcaggatgcgtgacctgtctgcttcagag
aaacaggaacatgtgaagctgcagaagcagatggagaagaagaatactgagctggagaca
ctgaggactcagaaggaaaaactacaggaagaagtcaagcaggcagaggccacgatcgat
gaactgaaagagcaggtggatgctgctctggggtcagaggagatggttgagaccctgaca
gagagaaacctcgacctggaggagaaagtcagagagctgagagaaacagtcactgatttg
gaagcaatcaatgaaatgaatgatgagctccaggagaatgcgcgggagacagaaatggag
ctgagagagcagctggacctgagtggtgcaaaggtcagagaggctgaaaaaagggtggag
gctgcccaggagactgtcgctgattaccagcagaccatcagcaaatacagagacctcacc
gccaggctccaggatgccaatagggagctgatcagtcagcagaatgccaatgctgaacaa
gttcagcaaccacctgcagaactatttgacttcaagatcaagtttgcagagaccaaggcc
tatgccaaggccattgagatggagctgaggaaaatggaagtggctcagtcaaacagacag
gtgtccctcctcacctccttcatgccagactccttcctccgacatggtggagatcacgac
tgtatactggtccttctactcattcccaggctcatctgcaaggccgagctgatcagcaaa
caggcccaggagaagtttgacttgaatgggaacctggtgcaggggacggggctcagaggg
tctccaggagaacagcgcagttttgcctcaggactggtctactccctcagcctgctgcag
gccactctgcacaaatatgaacaggctctgaacaactgcaacgtggagatttttaagcgc
atgggtacactttactctgaaatgagcttccatgagcgctccctggattatttcattgac
ctgctgcataaagaccagctagacgagactgttcaggtggaacccctgactaaggccatc
aagtattatcagcaactgtacagcgtccatctggcagatcagactgaggactgcacagtg
cagctggctgaccacatcaagtttacccagagtgccctggactgtatgggagtggaggtc
gctcgtctgcgggcgttcctgacagcaggtcaggagagttctggcctatctgtgcttctt
aaggacctggacacttcttgctctgatatcagacagttctgtaagaagatccgccgtcgc
atgcctggaacagatgtggttggagtacctgctgctctcgattttggaccacaggtgtca
gagacgctgacagagtgcaggcgccagctgacccgtgtggtggccgtgctgcaggaggtg
gctgcagctggagctcagatggttgctccactggcagaacaggagggtctcaacgctctc
aaactggaagacatcgcctgcaaggctgtggagcaggtatatggtgcccatggcctgaat
ggcccagagtgtctgcgtcagtcctgcagctccgtcattgctactatgaacaagatggct
acagccatgcaggaaggagagtatgatgctgacaaacctcagggaaagaccccccctgtg
gagataagagcagccactgtcagggccgagatgactgatgctgagggtctaggagttaaa
ctagaagacagagagacagtcatcaaggagcttaagaaatctcttaagatcaagggtgag
gagctgagtgaggccaatgtccgcctgagcctgctggagaagaagctggacacctccacc
aaagatgcagatgaacgggtggagaagattcagaccaaactggacgagaatcttgccctg
ctgaagaagaaagaaaaggagtttgaggagacaatggatgctctgcaggctgatatcgac
caactggaggcagagaaggcagagctgaaacaacgcatcaataaccaatcaaagatgacc
attgaaggcctgagaggctcacctgcctctggcattgcctccattgtccagggatctgca
ggaggtctgcctccatccatggcagggccggtgcaggtggtggactcccctctcctcagg
cagcaggttgaggctcagagactaggcattaaacatctcaagaatcaaaacaacagactc
aaggcagagaagatgagagcccagctggcctccctgcctccactctgccctcccaaactg
ccacaagtgtccaaagaaagctccatgcctccagagggactaaacacaggcatctatcgc
aggactgaccaactgctggcaacactgctcaagctgagtgcagagtttaaagtggtggac
atcacagggaagacagcagtcagtgccagtgcccagttacttgagcagacggctcgactg
cagaacctcagtgatgctctggacaaactcaagggagaagtagccgaacatgtagtctca
tatcagcctggagcaaaggcatcctctgactttgccaccttcccagcatcctcctttgtt
aaggccaaggaagagaagcagggaggaacagtgtttgtaggtcgtgtttccattccatgc
acccgcggacaggaacaagtccaccgcctcgtcctatcacagcagcagctgcagaaagtg
caccgcctccttatgtcataa
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integrated database retrieval system