Lates calcarifer (barramundi perch): 108888955
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Entry
108888955 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UHRF2
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108888955
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108888955
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108888955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
Rad60-SLD
PHD_2
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108888955
NCBI-ProteinID:
XP_018540722
UniProt:
A0AAJ7PWS6
LinkDB
All DBs
Position
LG9:11080059..11110336
Genome browser
AA seq
920 aa
AA seq
DB search
MWIQVRTIDGKETRTVEDLSRLTKIESLRLKIQDIFNVSPQQQRLFYRGKQMEDGQTLFD
YNVGLNDIIQLLIRSQTDPPDSPATKDSSGVSCSSAPPTDSRSESHNSPAPVSPAAMETN
TNIDNDSSSITTRTVNETKPDASTTSNSTSTKNGFKSSSPVRDTQPPTSSRNTLVDPGIG
VYKINELVDCRDVSIGAWFEACIENVTRAPKGQITPTKGKVGRPPKRTNGKLEAEQGQAH
GQGQTIDSNRNNVVLNSESNGASTSQTDSTAATESKEREEDVIYHIKYDDYPENGVVEMR
PVDVRPRARTLLRWDQLQVGMHVMVNYNMETPDERGFWFDAEVQALNQTSRTNKELRVKI
LLGGPGDVIGDCKVQFLDEIYQVEKPGARALSAADGQFKRKSGPECKHCKADPDAECRFC
SCCVCGGKQDAHMQLLCDECNMAFHIYCLNPPLATIPDDEDWYCPTCKNDTSEVVKAGEK
LKASKKKAKMPSATTESQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTTWKFRVQV
SEAGVHRPHVGGIHGRSNDGSYSLVLAGGFEDEVDRGDEFTYTGSGGRDLSGNKRIGEHS
FDQTLTHMNRALALNCDAPLNDKDGAESRNWRAGKPVRVVRSSKGRRISKYAPEEGNRYD
GIYKVVKYWPEIGKCGYLVWRYLLRRDDLEPAPWTPEGLERIKKLGLAVQYPPGYLAAMA
NKTKKEACARPGRGGRSKHYPGRGRPRRQRKIKEKEENDEEEEDMQPMASMEEEQEPQSN
GEQKTTRDSETPPAEEPPSKRVKIEETFQLSEQQRQLIREDTANKKLWDEAMEHLKEGPN
FLRKMEQIFMCVCCQELAFQPITTICSHNVCKTCLQRSFRAKVYTCPACRHDLGKDYVMT
QNKMLQMLLDQFFPGYSKGR
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaggttcgtaccatagacgggaaggagacgcgaaccgttgaggatctttct
agattgaccaaaattgagtctttacggttgaaaatacaggacatcttcaatgtaagccca
caacagcagcgcctcttctaccgagggaagcagatggaggatggacagacactgtttgac
tacaacgtgggtctcaacgacatcatccagctgctgattcgctctcagaccgaccctcca
gacagccccgccaccaaggactcctcgggcgtttcctgtagttcagctccccccactgac
tccaggtctgagagccacaactccccagctcccgtctcccccgctgctatggaaaccaac
accaatatagacaatgatagcagcagcatcactaccaggaccgttaacgaaaccaagccg
gacgccagcaccaccagtaactcaaccagtaccaaaaatgggttcaagtcctccagtccg
gtacgggacacccagccccccacatccagcagaaacacactagtcgacccaggcattggt
gtgtacaagattaacgagctggtggactgcagagacgtcagcattggcgcctggtttgag
gcctgcatcgaaaatgtgacacgcgctcccaaaggacagataacgcccaccaagggcaag
gtgggccggcccccaaaaaggactaatggaaagctggaggccgagcagggacaggcccat
ggccagggccaaaccatagacagtaacaggaataatgttgtgttaaactcggagagtaac
ggagcctccacctctcagacagactctacagcagctacggagagcaaggagcgagaagag
gatgtaatttaccacattaaatacgacgactacccagagaacggcgtggtggagatgcga
ccggtggatgtgcgaccgcgtgcgaggaccctgctgcggtgggaccagctccaggtgggc
atgcatgtgatggtcaactacaatatggagacaccagatgagaggggcttctggttcgac
gccgaggttcaagccctcaaccaaacctctcgcaccaacaaggagctccgagtcaagatc
ctcctcgggggtcctggagatgtgatcggagattgcaaggttcagtttctggatgaaatc
taccaggtggagaaaccaggggctcgtgcactctcagctgcagatggacagtttaagcgg
aagagcgggccggagtgcaagcactgcaaggccgaccctgacgccgagtgtcgcttctgc
tcctgctgcgtgtgcggcgggaagcaggacgctcacatgcagctgctgtgtgatgagtgc
aacatggcgtttcacatctactgcctcaacccgccgctagccaccatcccagacgacgag
gactggtactgccccacctgtaaaaacgacaccagtgaggtggtgaaggcgggagagaag
ctcaaagccagcaagaagaaagccaagatgccctcggcaacaactgagagtcaaagggac
tggggaaagggtatggcttgtgtggggcgtactaaagaatgcacaattgttccttcaaac
cactatggacccatacctggtattcctgttggaaccacctggaaattcagagtacaggtg
agtgaggcaggtgtccacaggccacatgtgggcggtatccacgggcgcagtaacgatggc
tcctactcactggtgttggcaggggggtttgaggatgaagtggaccggggagacgagttc
acctacacgggcagtgggggtcgtgacctctcaggaaacaaacggatcggagagcactct
tttgaccagactctgacacacatgaacagggcattggccttaaattgcgatgcacccctg
aatgacaaagatggggcagagtccaggaactggcgggcaggaaagccggtgagggtcgtg
cgcagttccaaaggtcgacgtatcagcaaatacgctcctgaggagggaaaccgctacgat
ggtatttacaaggtggtaaagtactggccagagattggaaagtgtggttacctggtgtgg
cggtacctgctgagacgggacgatctggaaccagcaccgtggacacctgaaggactggag
aggatcaagaaactgggccttgctgttcagtacccgccgggctatttggcggccatggct
aacaagacgaagaaggaggcctgcgccagacccggtcgcggcggccggagcaagcactat
cccgggagggggaggccacgaagacaacgcaagatcaaggagaaagaggaaaacgatgag
gaggaggaggacatgcagccgatggccagtatggaagaagagcaggagcctcaaagtaat
ggagagcagaagacaaccagagatagtgaaacgccaccagcagaagagcctccctctaaa
cgggtgaagatagaggagaccttccagctgtcagagcagcagcggcagttgatccgagag
gacacagccaacaagaagctctgggatgaagccatggaacaccttaaagagggaccgaat
ttcctgcgcaagatggagcagatcttcatgtgcgtgtgctgccaggagctggccttccaa
cccatcaccaccatctgctcacacaacgtttgcaagacttgtctccagcggtcgttccga
gcaaaggtgtacacctgccccgcctgccgtcacgacctgggcaaggactacgtcatgacc
caaaacaagatgctccagatgctgctcgaccagttctttcccggctacagcaagggccga
tga
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