Lates calcarifer (barramundi perch): 108889028
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Entry
108889028 CDS
T04895
Name
(RefSeq) tubulin alpha-1B chain isoform X2
KO
K07374
tubulin alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
lcf04210
Apoptosis
lcf04530
Tight junction
lcf04540
Gap junction
lcf04814
Motor proteins
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108889028
09143 Cell growth and death
04210 Apoptosis
108889028
09144 Cellular community - eukaryotes
04530 Tight junction
108889028
04540 Gap junction
108889028
09142 Cell motility
04814 Motor proteins
108889028
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108889028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108889028
03036 Chromosome and associated proteins [BR:
lcf03036
]
108889028
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108889028
04147 Exosome [BR:
lcf04147
]
108889028
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108889028
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108889028
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108889028
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108889028
Exosomal proteins of other body fluids (saliva and urine)
108889028
Exosomal proteins of colorectal cancer cells
108889028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
108889028
NCBI-ProteinID:
XP_018540860
UniProt:
A0A4W6FNQ6
LinkDB
All DBs
Position
LG6:23037460..23040333
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatccacgttggtcaggctggcgtccagattggcaatgcatgc
tgggagctttattgcctggaacatgggatccagccggacggacagatgcccagtgacaaa
gccatcggcgggggagatgattccttcaacaccttcttcagtgagactggagctggaaaa
cacgtccccagggctgtttttgtcgacctggagcccacggtcatcgatgaggtgcgcact
gggacctaccgtcagctcttccaccctgagcagctgatcactggtaaagaggatgctgcc
aacaactacgcccgtggacactacaccatcggcaaagagatcattgacctggtgctggac
aggatccgcaaactggctgaccagtgcactggtcttcagggcttcctggttttccacagc
ttcggaggtggcaccggctctggtttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtctaagctggagttctccatctacccagctccccaggtgtccactgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagataacgaggccatctacgacatctgccgtaggaacctcgatatcgag
cgtcctacctacaccaacctgaacaggttgatcagtcagatcgtgtcctccatcactgct
tcccttcgtttcgatggtgccctcaatgttgatctgaccgagttccagaccaacttggtg
ccatatccccgtatccacttccccctggccacctatgcccctgtcatctctgctgagaag
gcgtaccatgagcagctctcagtggctgagatcacaaacgcctgctttgagccagccaat
cagatggtgaaatgtgacccacgccacggcaagtacatggcttgctgcctcttgtaccgt
ggtgatgtggtgcccaaagatgtcaatgctgccatcgccaccatcaaaaccaagcgctcc
atccagtttgtggactggtgccccactggtttcaaggttggcatcaactaccagcctccc
accgtggttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggctcgaccacaagttcgatctgatgtacgct
aagcgtgcctttgttcactggtacgtgggtgagggtatggaggagggagagttttctgag
gccagagaggatatggcagctctggagaaggattacgaggaggtcggagttgactccatt
gagggtgagggagaggaggagggtgaggagtattaa
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