Lates calcarifer (barramundi perch): 108889039
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Entry
108889039 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108889039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108889039
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108889039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
SH3_1
SH3_9
Ank
PH
Ank_5
Ank_2
SH3_2
Ank_4
Ank_3
IMD
Rx_N
Syntaxin
Motif
Other DBs
NCBI-GeneID:
108889039
NCBI-ProteinID:
XP_050923285
UniProt:
A0AAJ8B057
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MPECVSVSEFVQEVQEDWSSPTTSSFTSKMISCRNTVYLLEEALDSDRLVLQKMKKAAKA
KYTSGQEHVSHLEQYINSMEKLSVNCHSNGETEVGSAFCRLADFSKELVSPMKNLLKSML
HNINFFLDSLVKGDLREVKGDLKKPFERAWRDYESRFKQVEKEKRELARQYGMVRSEVSG
GEIAEELEKERRSFQLSMCEYLIKVNEIKTKRGVDLLQNLIKHYHSHNNFLQECVSTTQR
LKQYMEELNGVLTTVKQRREEEKRQLCALRDQLRPVVHTEQDSLPKQVYSMHQLLGDKQY
GTERTGFLYKKSDGLRKMWQKRKCSVHNCYLTIAHATPNKPPTRLNLLTCQVKPSVEDKK
CFDLISHNRTYHFLAEDEAECVAWISVLSNSKQEALSVALDGGRRGGGGGESSVEDLTRA
ITDDIRRMPGNNSCCDCGAPGHICQLINQSVNLFSHLDNLKFLHSLPLSVDPGWLSTNLG
ILTCIECSGIHREMGVHVSRIQSLSLDSLGTSDLLLARNVGNSGFNEILEANLLSPSLKP
SQHSHMAERKDFIMSKYQDIHFVRRSHSSAAAMRLGLQEATKSCDIYSLIHLYAQRTELS
QPLHTHIQEKGETALHLAVLLADRTSLHILDFLAQNWFIFSNSSNVDMQTSAGNTALHYS
CLHNKSDCVKLLLRARANPHIKNELGETALDVSRRLKHSQCEELLQQAQSNQFDHHVHVE
YEWRLRHDDLYDSDDDFDDKNGPVKKERTSSSSSSSFTSSFSFTSRPFSFSQSTSSSIIQ
PSSGPAGGGLLSVGRRLAMAMELHSRPSGSAPSPPPPPPSSPAPPLPPRVKAPSVPPPPP
PAGGEGVGGEEEEEGEVFFPLTGNRKSTPPPPIAVRHKRSCSESSKHDYGLPTSPRIYSG
PDSSFKKCVPASPLSSLTERPDRGFRRADSDGSSSHFLHPASKAPPNGSPTNQRSQSFES
NSRGPAPQPLPRRSLVARGTSSRRVQALYDCQADHHDELSFSEGQVLVVLGQEDSDWWHG
YIEDEPDQRGLFPSSFVQLLSD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgccggagtgtgtgtcagtgtcagagttcgtgcaggaggttcaggaggactggagctcg
cccaccacctcctccttcacctccaagatgatcagctgcaggaacaccgtctacctgctg
gaggaggctttggacagtgaccggttggtgctgcagaagatgaagaaagctgctaaagcc
aaatacacatcaggacaagaacacgtgtctcatctggagcagtacatcaattcgatggag
aagctgtcggttaactgtcactcgaatggagagactgaggttggctctgctttctgtcgg
ctggcggacttttctaaagagcttgtctctccaatgaagaacctgttaaagagcatgctc
cacaacatcaacttcttcctggactctctggttaaaggagacctgagggaggtgaagggg
gatctgaagaagccttttgagagagcgtggagggactatgagagcagatttaagcaggtg
gagaaggagaagagggagttggcccggcagtatgggatggtgaggagtgaggtgagcgga
ggagagatcgcagaggagctcgagaaggagagacgctcctttcaactgagtatgtgtgag
tatctgattaaggtcaatgagataaagacgaagagaggagtcgacctgctgcagaacctc
atcaaacactaccatagccacaacaatttcctgcaggagtgtgtttccaccactcagagg
ttgaagcagtacatggaggagctgaacggagtcctgactacggtgaagcagcgtcgagaa
gaggagaagagacagctgtgtgctctcagagatcagctgaggccggtcgtccacacagag
caggattctctacctaagcaggtatacagcatgcatcagctgctgggagacaaacagtac
ggaacagaaagaacaggattcctctacaagaagagcgacgggttgagaaaaatgtggcag
aaaagaaaatgttcagttcacaactgttacctgaccatcgcacatgctactcctaataaa
cctcctaccagactcaacctgttaacctgtcaagtcaaacctagtgtggaggacaagaaa
tgcttcgacctcatctctcataatcggacctatcacttcttggctgaagatgaagcagag
tgtgtggcctggatctcggtgctcagtaacagtaagcaggaggctctgagtgtggctctg
gacggggggaggagagggggaggtggaggggagagcagtgtggaggatctgacccgggcc
atcactgacgacatcagacggatgccaggaaacaacagctgctgtgactgtggagctcca
ggtcatatctgtcaattaatcaatcaatcagtgaatcttttttctcatcttgataacttg
aaattccttcactctctccctctctctgtagatcctggatggctctcgaccaacttggga
atcctgacctgtatcgagtgttcagggatccacagggagatgggggtccacgtctccagg
atccagtctctgagtctggacagtcttgggacttcagacttgctgttggccaggaatgtt
ggtaactctggatttaatgaaatactggaggcgaacctgctgagtccgtcactgaagccc
tcccaacacagccacatggcagagcgtaaagacttcatcatgtccaagtatcaggatatt
cattttgtgaggcggagtcacagctcggctgcagcgatgcgactcggcctgcaggaggcg
accaagagctgcgacatctatagtctgatccatctgtatgctcagaggacggagctgagc
cagccgctgcacacacacatacaggagaaaggggagactgcgctccatctagccgtccta
ttggctgacaggacttcgctgcacatcctggacttcctggctcagaattggtttattttt
tctaatagctccaatgttgacatgcagacatcagcaggaaacacagcgctgcattacagc
tgtctacacaacaagagtgactgtgtgaaactgctgctgagagccagagccaacccacac
atcaagaacgagttaggagagaccgctctagacgtcagccgaaggttgaagcacagccag
tgtgaggagctgctgcagcaggcccaatccaaccagtttgaccatcacgtccacgtggag
tatgagtggaggcttcgtcatgatgatctctacgacagtgacgacgactttgacgacaag
aatggcccagtgaagaaggagcgcacctcctcttcctcctcctcttccttcacctcctcc
ttctccttcacctcccgtcccttcagcttcagccagtccacatcctcctccatcatccag
ccctcctctggaccagcaggaggaggtctgctcagtgtggggaggaggctcgccatggcc
atggagctgcacagccggccctctggctctgctccaagcccacctccacctcctccgtcg
tctcctgcacccccactgcccccaagagtcaaagctcccagtgttcctcctcctccccct
cctgctggtggggagggagtgggtggtgaggaggaggaagaaggggaggttttcttcccc
ctgacaggaaacagaaagtcaacccctccacctcccatcgccgtccgacacaagaggagc
tgctctgagtccagcaagcacgattatgggttgccaaccagtcccaggatctacagcggt
ccagactcctcctttaagaagtgtgttccagcttctcctctcagttcgctgactgaacga
ccagacagaggttttcggagggcagatagtgacggtagctcctcccacttcctgcaccct
gccagtaaagctccgcccaatggatctcccaccaatcagcgctctcagagctttgagagc
aacagcagaggccccgccccacagccacttcctcgcagatcattggttgcccgaggcaca
tcgagtcggcgggttcaggcactgtacgactgccaggccgaccaccatgatgagctgagc
ttctctgagggacaggtgctggtggtcctgggacaggaagacagtgattggtggcatggc
tacatagaggacgaaccagaccagagaggcttgtttccgtcttccttcgtccagctgctc
tcagactga
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