Lates calcarifer (barramundi perch): 108889052
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Entry
108889052 CDS
T04895
Symbol
cyth4b
Name
(RefSeq) cytohesin 4b
KO
K18441
cytohesin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108889052 (cyth4b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108889052 (cyth4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108889052 (cyth4b)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108889052 (cyth4b)
Endosome - Golgi transport
Arf GTPase associated proteins
108889052 (cyth4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH
PH_11
PH_20
PH_8
PH_3
B3GALT2_N
Pilosulin
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
108889052
NCBI-ProteinID:
XP_018540849
UniProt:
A0AAJ7PX39
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Position
LG5:complement(3819249..3832234)
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AA seq
397 aa
AA seq
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MTDCQMVSSDFTADEKMEIESIKTYKKDLLDDIQRLKMEIDNVMAEILSFESAEENKTIE
KSKQFSNGKKKFNMDPKKGINYLVENQLLDGSAQSIAEFLYKEEGLNKTAIGEFLGEREE
IHLQTLKAFVELHEFSDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFATRYCDCNTHVFQ
SSDTCYILSFAIIMLNTSLHNPNVKDKTTLERFISMNRGINNGEDLPNDLLSKLYESIRN
EPFKIPEDDGNDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEFTTDKEPR
GIIPLENLCVREVPYPRKPYCLELYNPNSRGQKIKACKTETDGRVVEGKHQSYTICAASA
EERDSWIEAIRASITKDPFYDLVSVRKKKVINQAPQD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgactgattgccaaatggtttcctcagattttacagctgatgagaagatggagatcgag
agcattaagacgtataagaaagacctactggatgatatccagaggttgaagatggagata
gacaacgtaatggcagaaatactcagctttgagtctgcggaggaaaacaagactatagag
aagagcaaacagttctcaaatgggaagaagaaattcaacatggaccccaaaaagggcatc
aattacctggtggagaatcagctgctagatggaagtgcccaatccattgctgagtttctg
tacaaagaggagggactcaacaagacagcaattggagaatttcttggagaaagggaggaa
atccacctccagaccctgaaggcttttgtggaactgcacgagttctctgacctcaacctg
gtccaggccctcagacagtttctgtggagtttccgtctgcctggtgaagcccaaaagata
gaccgcatgatggaggccttcgccacacgctactgtgactgcaacactcatgtcttccag
tcatctgacacgtgctacatcctgtcttttgccataatcatgctcaacaccagcctccac
aaccccaatgtgaaggacaagaccactctggagcgcttcatctccatgaacagaggcatc
aacaacggagaggatctacccaatgatctgctctcgaaactgtatgagagcattcgcaac
gagcctttcaaaatcccagaggatgatgggaacgatctgactcacaccttcttcaaccct
gacagagaaggatggctccttaaacttggaggccgagtgaagacgtggaagagacgatgg
ttcatcctgactgacaactgcctctactactttgagttcaccactgataaagagcccaga
ggcatcatccctctagagaacctttgtgtgagagaagtgccatatcctcgcaaaccgtac
tgtctggagctgtacaacccaaacagtcgagggcagaagatcaaagcatgtaaaacagag
acggacggcagagtggtggagggcaaacatcagtcctacaccatctgtgccgccagcgct
gaggagagagactcctggattgaggccatcagagcaagtatcaccaaagatccattctac
gacttggtttcagtccgtaagaagaaggtcataaaccaagcgcctcaggactga
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