Lates calcarifer (barramundi perch): 108889058
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Entry
108889058 CDS
T04895
Symbol
atf4a
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-4 isoform X1
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04137
Mitophagy - animal
lcf04141
Protein processing in endoplasmic reticulum
lcf04210
Apoptosis
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108889058 (atf4a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108889058 (atf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108889058 (atf4a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
108889058 (atf4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
UPF0242
ZapB
AAA_13
OVT1
DUF3450
Motif
Other DBs
NCBI-GeneID:
108889058
NCBI-ProteinID:
XP_018540869
UniProt:
A0AAJ7V8L7
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Position
LG5:4152318..4157229
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AA seq
455 aa
AA seq
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MTLSQLALEDVEALYLEPSFLMADPMGPLLDQDEEEALSPSSSLEGKAPASPPLSFSSYA
SSLSPYQTLSSSPLSSASPPPSPPPTDPSSFLGTKAGVDSLSLPWLGASDLLDAHVGAED
GKADDAFAGMDWMSEKIDLNEFDLDSLIGSCSSDDAPSSPEDLLASLDSHMDLDLDSFNT
AIPTSQDSLELGLSLPTIPSLPLDLPLPRAAEAKTTKMVPDQEVVMKSEPPSPSPPSPVY
TLELGSEVDVLDAEKMATSLTAAIIPDPSGSIQPNNPIVLSIPTSAHFVVVLTNKDETSL
VAHPDPSIKTSPPSSDCDDDSGFESLASSPPRLPSPPPTSSQTAGSSRTKPYSKPEPATA
SSPSTKVSRVKSVSGAPKVVEKKLKKMEQNKTAATRYRQKKRVEQDLLNTECEELEKRNH
ELTEKAESISREIQYLKDLMEEVRKHRRGKTSSVA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacactttcccagctggccttggaggacgtggaggccctgtacttagagccctcgttt
ctgatggctgaccccatggggccccttctggaccaagatgaagaagaagctctttctccc
tcctcctctctagaggggaaggcgccagcttcgccccccctctctttctcctcctacgca
tcctccctgtctccctatcagaccttgtcgtcctccccactctcttctgcctccccacct
ccttctcctcctcccaccgatccctcctcgttcctgggaaccaaggccggagtggactcg
ctgtccctcccctggctgggtgccagtgatctgctcgacgcccacgttggagcagaagat
ggaaaagcagatgatgccttcgcaggcatggattggatgtcagagaagatcgacctgaat
gagtttgacctggattccctcattggctcatgctcatctgatgatgctcccagctccccc
gaggacctccttgcctcgctcgactcccacatggacctggatctagactccttcaacaca
gccatccccacttcacaagatagcctggaactgggtctgtctctaccaactatcccctcc
ctccctctggatctccctcttcccagggcagctgaggctaagacaacaaagatggtgcct
gatcaggaggttgttatgaagtctgagcctccctctccatctcccccctctccagtctac
acattggagctaggaagtgaagtggatgtgctggatgcagagaaaatggccacatccctc
actgcagccataatcccagatcccagtggaagcattcagccaaacaaccccatcgtgctg
tccattcccacctctgctcactttgtggtggtgctcaccaacaaagatgagacttccctt
gtagcgcaccctgacccgtccattaaaacctctcctccatcaagcgactgtgatgatgac
tctggatttgagtcattggccagctcaccacctcgtctcccctctcctcctcccacctct
tcccaaacagctggttcctctaggaccaaaccctactccaagccggagcccgccaccgcc
tcctccccctcgaccaaggtctccagggtcaaatcagtgtctggtgctcccaaggtggtc
gagaagaaactgaagaagatggagcagaacaagacggcagccactcgctaccggcagaag
aagagggttgagcaggacctgctcaacacagagtgtgaagagctggagaagaggaaccac
gagttgacggagaaggcggagtccatcagtcgagagattcagtatctcaaggatctgatg
gaggaagttcgcaagcaccgccgcggcaagaccagctcagtggcttaa
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