Lates calcarifer (barramundi perch): 108889058
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Entry
108889058 CDS
T04895
Symbol
atf4a
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-4 isoform X1
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04137
Mitophagy - animal
lcf04141
Protein processing in endoplasmic reticulum
lcf04210
Apoptosis
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108889058 (atf4a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108889058 (atf4a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108889058 (atf4a)
09143 Cell growth and death
04210 Apoptosis
108889058 (atf4a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108889058 (atf4a)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108889058 (atf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108889058 (atf4a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
108889058 (atf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
UPF0242
AAA_13
ZapB
OVT1
DUF3450
Motif
Other DBs
NCBI-GeneID:
108889058
NCBI-ProteinID:
XP_018540869
UniProt:
A0AAJ7V8L7
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Position
LG5:4152318..4157229
Genome browser
AA seq
455 aa
AA seq
DB search
MTLSQLALEDVEALYLEPSFLMADPMGPLLDQDEEEALSPSSSLEGKAPASPPLSFSSYA
SSLSPYQTLSSSPLSSASPPPSPPPTDPSSFLGTKAGVDSLSLPWLGASDLLDAHVGAED
GKADDAFAGMDWMSEKIDLNEFDLDSLIGSCSSDDAPSSPEDLLASLDSHMDLDLDSFNT
AIPTSQDSLELGLSLPTIPSLPLDLPLPRAAEAKTTKMVPDQEVVMKSEPPSPSPPSPVY
TLELGSEVDVLDAEKMATSLTAAIIPDPSGSIQPNNPIVLSIPTSAHFVVVLTNKDETSL
VAHPDPSIKTSPPSSDCDDDSGFESLASSPPRLPSPPPTSSQTAGSSRTKPYSKPEPATA
SSPSTKVSRVKSVSGAPKVVEKKLKKMEQNKTAATRYRQKKRVEQDLLNTECEELEKRNH
ELTEKAESISREIQYLKDLMEEVRKHRRGKTSSVA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacactttcccagctggccttggaggacgtggaggccctgtacttagagccctcgttt
ctgatggctgaccccatggggccccttctggaccaagatgaagaagaagctctttctccc
tcctcctctctagaggggaaggcgccagcttcgccccccctctctttctcctcctacgca
tcctccctgtctccctatcagaccttgtcgtcctccccactctcttctgcctccccacct
ccttctcctcctcccaccgatccctcctcgttcctgggaaccaaggccggagtggactcg
ctgtccctcccctggctgggtgccagtgatctgctcgacgcccacgttggagcagaagat
ggaaaagcagatgatgccttcgcaggcatggattggatgtcagagaagatcgacctgaat
gagtttgacctggattccctcattggctcatgctcatctgatgatgctcccagctccccc
gaggacctccttgcctcgctcgactcccacatggacctggatctagactccttcaacaca
gccatccccacttcacaagatagcctggaactgggtctgtctctaccaactatcccctcc
ctccctctggatctccctcttcccagggcagctgaggctaagacaacaaagatggtgcct
gatcaggaggttgttatgaagtctgagcctccctctccatctcccccctctccagtctac
acattggagctaggaagtgaagtggatgtgctggatgcagagaaaatggccacatccctc
actgcagccataatcccagatcccagtggaagcattcagccaaacaaccccatcgtgctg
tccattcccacctctgctcactttgtggtggtgctcaccaacaaagatgagacttccctt
gtagcgcaccctgacccgtccattaaaacctctcctccatcaagcgactgtgatgatgac
tctggatttgagtcattggccagctcaccacctcgtctcccctctcctcctcccacctct
tcccaaacagctggttcctctaggaccaaaccctactccaagccggagcccgccaccgcc
tcctccccctcgaccaaggtctccagggtcaaatcagtgtctggtgctcccaaggtggtc
gagaagaaactgaagaagatggagcagaacaagacggcagccactcgctaccggcagaag
aagagggttgagcaggacctgctcaacacagagtgtgaagagctggagaagaggaaccac
gagttgacggagaaggcggagtccatcagtcgagagattcagtatctcaaggatctgatg
gaggaagttcgcaagcaccgccgcggcaagaccagctcagtggcttaa
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