Lates calcarifer (barramundi perch): 108889059
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Entry
108889059 CDS
T04895
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108889059 (irx1a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108889059 (irx1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
108889059
NCBI-ProteinID:
XP_018540874
UniProt:
A0A4W6ES50
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Position
LG15:25525245..25530276
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AA seq
498 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPASFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTEG
SRDHRGGVGAGGELDSLEKRRAFALQAHEAFDKSKSTISVHPGSKENSDGNNNNTTRVLS
PDRSGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCGPAATTHPSAPHHQIQTHPAFL
PSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHHNHHLSAQQQQQQQPTS
VVVSPVAAAAALSNDSKASPETHSPKHIDHENGVRSDSPPTQTLKSSFRPIHDRSSLPSS
ARSPQDATQRVLTALSSA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctaggctacccgcagtacttaagtgcctcccaggcggtgtacggg
agcgagagaccgggagtgcttacgccttcgtcccggggagggagcaccgaaatcggggga
agtccgtccgccaccgcagctgcggtcacgtcggtgctgggcatgtacgccaacccgtac
gcacacaactacagcgctttcttaccttacaccagcgcggacttggctcttttctcacaa
atggggtctcagtatgagctgaaggacagtcctggcgtccaccctgccagcttcgcagcc
cacacctctccggccttctatccgtacggccagtttcagtacggggacccggccaggccc
aagaacgccacccgggagagcaccagcaccctgaaagcctggctcaacgagcacaggaag
aacccgtatccgactaaaggggagaagatcatgctggccatcatcaccaaaatgacgctg
acgcaggtctccacctggttcgccaacgccaggaggaggctcaagaaggagaacaaggtg
acatgggggagcaggagcaaagaggacggagaggacggtaacttgttcggcagcggggac
gaagctgagaaaaacgaagacgaggaggagattgatttggagagcatagacatagacaaa
atcgacgacaacgacggggatcagagcaacgaggacgatgacgataaatcaacggagggg
agcagggaccacaggggcggtgtcggtgcaggtggagagttggacagcttggagaaaaga
cgggccttcgccctgcaggcccacgaggcctttgacaaatctaagagcacaatttcagtt
cacccagggagtaaggagaactcggacggcaacaacaacaacactacaagagttttgtct
ccggacagatccgggagctttcccctcccgtctaacaataagcctaaaatctggtcttta
gcagagaccgccactagtcccgatagttcatctcagaaacccacgtccccttgtggcccg
gcggccaccactcacccatcagccccccaccaccagatccaaacccaccctgccttcctc
cccagtcacggactgtacacttgccagattgggaagttccacaactggacaaatggggct
ttcctgggccagaactccctgctgaatgtgaggtcgtttctgggagtaaaccagcaccat
caccaccaccacaaccatcacttgtcggcccagcagcagcagcagcagcagccgacatca
gtggtggtgtcgccggtagcagctgcagcagcgctcagcaacgacagcaaggcctcacca
gagacccacagtcccaagcacatagaccatgaaaacggtgtaaggtctgattcacctcca
acacagaccctgaagtcttcctttcgacccatccatgacagatcctctctgccttccagc
gccaggagtccacaagacgccacgcaacgggtcctcactgctctgtcctcggcttga
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