Lates calcarifer (barramundi perch): 108889083
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Entry
108889083 CDS
T04895
Name
(RefSeq) sodium-dependent dopamine transporter
KO
K05036
solute carrier family 6 (neurotransmitter transporter, dopamine) member 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108889083
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108889083
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108889083
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108889083
NCBI-ProteinID:
XP_018540926
UniProt:
A0A4W6ELX8
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Position
LG15:complement(25179691..25195855)
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AA seq
618 aa
AA seq
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MLTERVPVGLMSSVVAPEKPTSNTMGPKEVELILVKEQNGVQFTSTTLVAPTPTQTNPSG
EEERETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLFFMVIAGMPLFYM
ELALGQYNREGAAGVWKICPIFKGVGFTVILISLYVGFYYNVIISWALFYLFSSFTGELP
WVHCNNTWNSPNCSDWADNSSVSDIYKATPAQEYFERGVLHIQDSNGIDDLGRPRWQLTS
CLAVVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTVLLLRGVTLPGAIDGIKAYLSVDF
LRLCDAKVWIEAATQICFSLGVGFGVLIAFSSYNKFSNNCYRDAIITSSINSLTSFFSGF
VVFSFLGYMSYKHNVALDKVARDGAGLVFVIYPEAIATLPGSSVWAVIFFIMLLTLGIDS
AMGGMESVITGLIDEFKFLHKHRELFTLFIVVATFLISLFCVTNGGMYVFTLLDHFAAGT
SILFGVLIEAIGIAWFYGVDRFSDDIEEMIGQRPGRYWRLCWKFVSPCFLLFMVVVSFAT
FNPPNYGSYMFPPWANMVGWCLAISSMTMVPLYAIYKLCTLPGKFCDRLAYAITPETEHH
LVDNGEVRQFTLHHWLVV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagagagagtccctgtcggcctgatgtcctcggttgtagccccggagaaaccc
acctccaacaccatgggccccaaagaggtggagctgatccttgtaaaggagcagaacggg
gtccagttcacctcgaccactttagtggctccgaccccgactcagaccaaccccagcggg
gaggaggagagggaaacctgggggaagaaaatcgacttcctcctgtccgtcatcggattc
gctgtggacctcgccaacgtatggagattcccctacctttgctacaagaacggaggaggt
gcgttcctggttccatacctgttcttcatggtgatagcaggcatgcctcttttctacatg
gagctggctctgggacagtacaacagagagggggcagcaggggtctggaagatctgtccc
atatttaaaggtgttggctttacagtgatcctcatttccctctacgttggtttctactat
aacgtcatcatctcctgggcgctgttctacctcttctcctcgttcaccggcgagctaccc
tgggtccactgcaacaacacctggaacagcccaaactgctctgactgggctgacaacagc
tcagtcagtgacatttacaaggctacccctgctcaggagtactttgaacgaggggtgctc
cacatccaggatagtaatggtattgatgacctgggtcgtccacgctggcagttgacttcc
tgtctagctgtggtaattgttctactctacttcagtctctggaagggagtcaagacctct
ggcaaggttgtgtggataacagccaccatgccctacgtggtcctgactgttctgctgctc
cgcggagtcactctgcctggagccattgatggcattaaggcctacctctccgtggacttc
ctgagactctgtgacgccaaggtctggattgaggcagcgacccagatctgtttctcactg
ggagtggggtttggtgtgctaattgccttttccagctacaacaaattcagcaacaactgt
tacagagatgccatcatcaccagctccatcaactctttaaccagtttcttctctggcttt
gtggtcttctccttccttggctacatgtcctataaacacaatgtggccttggacaaagtt
gccagagatggtgctggattagtgtttgtcatttacccagaagccattgcaacattacct
gggtcatcagtgtgggcagttatcttcttcatcatgttgttgacactgggtattgacagt
gctatgggtgggatggagtcagtgatcactgggctgattgatgaattcaaattcctccac
aaacacagagagctgttcaccctcttcattgttgttgccacctttctaatatccctcttc
tgtgttacaaatggtgggatgtatgtgtttactctgctggaccactttgcagcaggaaca
tcgattctctttggagtgcttattgaagccattggcatcgcatggttctatggagtggat
cgtttcagtgatgacattgaggagatgattggccagcgaccgggcaggtactggaggctg
tgctggaagtttgtcagcccctgcttcctcctgtttatggtggtggtgagctttgccaca
ttcaaccctccaaactacggctcctacatgttccctccgtgggctaacatggtggggtgg
tgtctggccatttcctcaatgaccatggtgcctctctatgccatctacaaactctgcaca
ctgcctgggaaattttgcgatagactggcttatgccatcaccccagagacagagcatcat
ttggtagacaacggggaggttcggcagttcactctgcatcactggttggtggtctga
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