Lates calcarifer (barramundi perch): 108889089
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Entry
108889089 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: adhesion G protein-coupled receptor B1-like
KO
K04596
adhesion G protein-coupled receptor B1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04115
p53 signaling pathway
lcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108889089
09143 Cell growth and death
04115 p53 signaling pathway
108889089
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108889089
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108889089
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108889089
Peptidases and inhibitors [BR:
lcf01002
]
Mixed peptidases
Family P2
108889089
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Phagocytosis
Others
108889089
G protein-coupled receptors [BR:
lcf04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
108889089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AGRB_N
7tm_2
TSP_1
TSP1_spondin
GAIN
TSP1_CFP_C
TSP1_ADAMTS
TSP1_CCN
HRM
Motif
Other DBs
NCBI-GeneID:
108889089
NCBI-ProteinID:
XP_050923678
UniProt:
A0AAJ8B1Q9
LinkDB
All DBs
Position
LG3:complement(15045345..15069310)
Genome browser
AA seq
1510 aa
AA seq
DB search
MAWSALTGPCVAIALLFFGLTSCTPSGPASATCATLEQSRFFGVFSSTTTLPSTPCSWTL
QNPDPRRYTVYMKITKPTDSCVPRQIRTFQFDSFIETSRTYLGMESFDEVVRLCDASTTV
TYLESSKQFLQMRKVAPRNGLELAEGENSVSDFKAEFLVVGKRNPSMPACQMLCQWLEKC
LSTSTHDYPCGIMNTPCQCWETPKRKPGSCYRGGVYVEKCLPVPRDNGRDAEIIKGWAGW
GRWSVCSQECGGGVQVRSRTCQPEDGVCEGTVEEGRACNPQPCIGKGPNRSQGLRAIIGL
KRDNAGDANHGVVATQTVDAKTDEWSPWSACSITCGEGWQSRTRVCATSSFTTQCTGPLR
ENRPCNNTAVCPVDGAWDEWTPWSLCSSTCGRGYRDRTRTCKLPQNGGEPCRGPTKQTKF
CNIAVCPVDGSWNEWSAWSACSATCSSGTMQRTRECNGPSYGGSECHGSWKETNNCFLKE
CPVDGRWQPWSTWGSCSKTCGGGIQQRQRVCEGPLFGGEPCPGEKGEQRRCNEKRCPEPH
EICPEQNTGDVVWKQTPAGDMAYTTCPADASGMILRRCTLDAVGLASWENPAHIKCVSKN
YDNIQMLSRGYISKAQMGESVDGVAEVISRLRFSSDEGAKYSGDLLAIMEILKNTTELYK
GTRLRLSNADVANYVQTISNLLKEEHRDKWEEVQLMGASIKEFLRLVEDFVNMIGMQMSG
FQDIYEVTENFVLSIHKRPATTNSNFTFPVKGWRGMLDWVRTSEERISVSRDALSIEQSD
GNDAFVTGIVLYRNLASLLSFQSNTTLLNSKVVTVIVNPTTTLLSSPVEIEFPHLQNGTM
NETCLSWDESETSSLLGSWSARSCRSVPVHSYRTKCVCDSPSTFAILARINFDSIMDKAL
LPSVTLIVGCGVSSLTLLLLIIIYVSVWKYIRSERSVILINFCLSIICSNALILVGQTQA
RNKVVCTLVAAFLHFFFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGWGLPALVV
AVSVGFTKAKGYGTVNYCWLSLEGGLLYSFVGPAAAVVLVNMVIGILVFNKLVSKDGITD
VKLKERAGASLWSSCVVLPLLALTWMSAVLAITDRRSALFQILFAVFDSLEGFIIVMVHC
ILRREVQEAVKCRVVDRKDDGNGDSGSSLHNGHTQLMQSDNEKDGDSSRQGMKSSSEEKM
PPPQLPLPMGSNFHTLPSNPSKSHMQAVPEYSSHTLTLKREKSRLAGGVDPSCGKPVYVC
EGELFKQLDADLARAQCEGSVSDGSGYVLMPNTTSTLRSKPKDDPTKYNISVEQLPQARL
MHLGGPFAEPQAAFGMKSIPPDQVSVSYSERDSPIQNIHNMSSESHITHSSLENTFESMN
SMMSKSETISTLSMSSLERQKSRYAELDFEKIMHTKKRHQNMFQDLNRKLHHAEKDRESP
ASDSKDKQQAPLERPWEGVRGIPQSPPAWVRKDLEPLAASPLELHSVDWEKTGTTIPLVG
QDIIDLQTEV
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtcagctcttaccggcccttgtgtggccatcgccctactcttcttcggtttg
acctcctgcactccctctggaccggcctccgccacctgcgccacactggaacagagtcgc
ttcttcggcgtgttctcctctacgaccaccctgccgtccaccccatgctcctggaccctg
cagaaccccgatcctcgccgctacaccgtctacatgaaaatcaccaagcccaccgactcc
tgcgtgccccgccagatcaggaccttccagtttgactccttcatcgagacctcccgcacc
tacctgggcatggagagcttcgacgaggttgtcaggctgtgcgacgcttcaaccaccgtc
acctacctggagtcgagcaagcagttcctgcagatgcgcaaagtggcaccaaggaacgga
ctggagcttgcagagggggagaacagcgtcagtgatttcaaggctgagtttctggtcgtg
gggaagaggaacccaagcatgcccgcctgccagatgctgtgccagtggctggagaagtgt
ctgtccaccagcacccatgattatccctgtggcatcatgaacaccccatgccagtgctgg
gagaccccaaagagaaaaccaggaagctgctacaggggcggtgtctacgttgagaaatgc
cttcccgtccccagagacaacggacgcgatgctgagattatcaagggctgggctggttgg
ggccgctggtccgtatgcagccaggaatgcggtggcggagtccaggtgcgcagccgaacc
tgccagcccgaggacggcgtgtgcgagggaacagtcgaagaggggcgggcctgcaaccct
cagccctgcattggcaaaggacccaacaggagccagggtctgcgggccatcatcggtttg
aagagagacaatgccggtgatgccaaccatggagttgttgcaacccaaacagtagatgct
aaaaccgatgagtggtccccctggagtgcatgctcaatcacctgtggtgagggctggcag
agtcgtacccgtgtctgcgctacatcctccttcaccacccagtgcaccggacccctgcgt
gagaaccggccctgcaacaacacagccgtctgccccgtggatggtgcttgggatgagtgg
accccctggagcctgtgctcatccacatgcggccgtggttaccgtgatcgtacccgcaca
tgcaagctgccccagaatggaggagagccttgccgcggccccacaaaacaaaccaagttc
tgcaacatcgctgtttgcccagtggacggatcctggaatgagtggtctgcctggagtgca
tgctctgcgacttgctccagcggcaccatgcagaggacacgggagtgcaacgggccatcc
tacggcggctctgagtgccacggcagctggaaagagacaaacaactgcttcctgaaagaa
tgtcccgttgatggacgctggcagccatggagcacatggggcagctgcagcaagacttgt
ggtggaggcattcagcagagacagagagtctgtgaagggcctctctttggtggagaacct
tgccccggtgaaaagggagagcagaggcgctgcaatgagaagagatgccctgagccccat
gagatctgccctgagcagaacactggagatgttgtgtggaagcaaacccccgctggagac
atggcttataccacttgccctgctgatgcttcaggtatgattctgcgccgttgcactctg
gatgccgtaggtcttgcttcctgggagaacccagctcacatcaagtgtgtctccaagaac
tatgacaacattcagatgctgtcaaggggctacatctccaaagcgcagatgggggagagt
gtggacggagtcgctgaggtgatttcccgcctgagattctcctctgatgaaggggcaaag
tacagtggcgacctcttggccatcatggaaatcctgaagaacaccaccgaactgtacaag
ggaaccaggctgagactgagcaacgccgacgttgcgaactacgtccagaccatcagcaac
ttactgaaggaggaacatcgtgacaaatgggaggaggtacagctgatgggcgccagcatt
aaggagttcctccgccttgttgaggactttgtgaacatgatcggtatgcaaatgagcggc
ttccaggacatttatgaagtcaccgagaattttgtgctgagcatccacaagcgccctgca
acaacaaactccaacttcaccttccctgtgaagggctggaggggcatgctcgactgggtc
aggacctctgaggagaggatctctgtgtcccgtgatgctctgtccattgaacagtctgac
ggcaatgacgcttttgtgactggcatcgtcctctatagaaaccttgcttctcttctgtcc
ttccagagtaacaccaccctgctcaactccaaggtggtgacagtgatcgtcaaccccacg
acaactcttctgtcatcccctgttgagattgagttcccccaccttcaaaatggcaccatg
aatgagacatgcctctcatgggacgagagcgaaacttcctctctgcttgggtcttggtct
gctcggagctgcagatcggtccccgttcattcatacagaaccaaatgcgtgtgtgacagc
ccctccaccttcgccattttagcgcgcatcaacttcgactcgatcatggacaaggcactg
ctcccgtccgtgactctcatcgttggctgtggggtctcctctctcaccctgctgctcctc
atcatcatctacgtctcagtgtggaagtatatccgctccgagcgctccgttatcctcatc
aatttctgcctctccattatatgctccaatgccctcattcttgtcggacaaactcaggct
cgcaacaaggtggtgtgcactcttgtagctgctttcctgcacttctttttcctctcctct
ttctgctgggtgctgacagaagcttggcagtcctacatggctgtcactggtcgtctgcgc
aaccgcataatccgcaagcgcttcttgtgcttaggctggggccttcccgcactggtggtg
gctgtgtcagtgggtttcacaaaagctaagggatacggcactgtcaactactgctggctg
tctcttgagggcggactcctctactcctttgtcggccctgctgcagctgttgttttggtg
aacatggtcattggtattctggtcttcaacaagctggtatccaaggacggtatcaccgat
gtgaagctgaaggagagagctggggcatcgctgtggagctcctgcgtggtcttgcccctc
ttggccctcacctggatgtctgctgtcctggccatcactgaccgccgctcggccctcttc
cagatcctctttgccgtgttcgactctctggagggtttcatcatcgtcatggttcactgc
atcctgcgtagagaggttcaagaagctgtaaagtgcagagtagtcgaccgcaaggacgat
ggcaatggagactctggcagttcccttcacaatggccacacccagcttatgcagtctgat
aacgaaaaggatggagattcaagcagacaaggaatgaagagctcctctgaagagaagatg
cctcctcctcagctgcctcttcccatgggctccaacttccacaccctgccatccaacccc
agcaagagccacatgcaggcggttcccgaatattccagccacaccctcaccctgaagaga
gagaagagccggcttgcaggaggagtcgacccatcctgcgggaaacccgtgtatgtctgc
gagggcgagctcttcaagcagctggacgcagatctcgctcgggcccagtgcgagggcagt
gtctccgatggcagcggctacgtcctcatgcccaacaccacctccaccctgaggtccaag
cccaaggacgacccaacaaaatacaacatcagtgtggagcagctgccacaggccaggctc
atgcacctcggcgggcccttcgccgagccccaggccgcctttggtatgaagtcaatcccc
cctgatcaggtcagcgtgtcatactcagagagagactcgcccatccagaacatccacaac
atgtccagcgagtctcacatcacccacagcagcctggagaacacctttgagtccatgaac
tctatgatgtccaagagtgagaccatctccacactgtcaatgagctccttggagagacag
aaatcccgttatgctgagttggactttgagaaaattatgcacacaaagaaacgccaccag
aacatgttccaggacctaaataggaagctacatcatgctgagaaagacagagaatcacct
gcctctgacagcaaggacaaacagcaggctccactggagaggccatgggaaggagtccgg
ggaataccgcagtcgcccccagcttgggtgcgcaaagacctggagcccctagctgcctcg
cctctggagctgcactctgtggattgggagaaaactggcaccaccattcctctagtgggg
caggacatcatcgacctgcagacagaggtctga
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integrated database retrieval system
