Lates calcarifer (barramundi perch): 108889158
Help
Entry
108889158 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: attractin
KO
K24332
attractin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lcf04091
]
108889158
Lectins [BR:
lcf04091
]
C-Type lectins
Others
108889158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
EGF_LMN_ATRN
Kelch_5
Kelch_4
CUB
PSI
EGF_TEN
Kelch_2
Kelch_6
EGF_Teneurin
NANM
PSI_integrin
EGF_laminin
EGF_2
TMEM100
DUF4842
Motif
Other DBs
NCBI-GeneID:
108889158
NCBI-ProteinID:
XP_018541033
UniProt:
A0AAJ7V8W3
LinkDB
All DBs
Position
LG19:complement(21376490..21500991)
Genome browser
AA seq
1373 aa
AA seq
DB search
MYGATRRACSGSGRGRSLLMLTTALLLSVVGLLSGLPGVTEAKECDKPCMNGQCNTATGN
CVCFPGWVGDQCQHCGGRFRLTGPSGYLTDGPGNYKYKTKCTWLIEGQPNTILRLRFNHF
ATECSWDHLYVYDGDSIYAPLLAAFSGLIVPERYGNETVPEVVSQSGYALLHFFSDAAYN
LTGFNISYRVNTCPNNCSGRGECRVGISSDLVYCECEANWKGEACDVPYCLAECGYPERG
RCQNKTCICKTGWQGPDCSIPVPANSSFWSREEYTEAGLARASHKAVVDQGIMWVIGGYV
FNASDYHMVKAYNLSNKRWLTLDPSVNTVTPRYGHSLALHEGKIFMYGGKIDSSGNVSSQ
LWVFHIQNQTWVLLSPRAKDQYAVVGHSAHIVPPVQEGASPVMLVLFGHCPLYGYISQVQ
EYNIAKNTWSMVSTDGALVQGGYGHSSVFDPGTRAIYIHGGYKAFSANKYGLAGDLYKFD
VDKRKWTILRDSGFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFLAYSLACD
EWTVLPRPDLYHDVNRFGHSAVFSDSVMYVFGGFNSLLLSDVLMYTSPSCLAFSSQESCS
QAWPGIHCVWNSTQATCLPWESNAIGPEQQQLPASCNTRSYVDNERCDQYTDCYSCTANT
NGCQWCSSQCVSLGSNCTSTTGAIGEYDVCPKDNPSYVCSKKTSCKSCAVDQNCQWEPRN
QECISLPENVCGESWHLVGNSCLKFITAKDSYDNAKLACRSHNAVLASLTTQKKVDFVLK
ELQIMSMVYKATVTPWVGLRKINVSYWCWEDMSPFTNTTLQWLPGEPSDAGFCGYLAEPA
SSGLKAQTCINPVNGSLCERPANHSAKQCRTPCAMRTTCSECTSSSSECMWCSNMKQCVD
SNAYVASFPFGQCMEWYTMNTCPPENCSGYRTCGQCLDQPGCGWCTDPSNTGKGQCIEGS
YRGPFQTSVPAPSTLPGLPASPQPALNASMCPSEAKYNWSFIHCPACQCNGHSQCVNESV
CEKCEDLTTGRHCESCISGFYGDPTNGGSCQPCKCNGHASMCNPNNGKCFCTTKGIKGDR
CHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPEEPNRDLDMF
INASKNFNLNITWATSFTAGTQTGEEIPIVSRSNIKEFKDSFSNENFDFRNSPNITFFVY
VSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQL
LREMQQMASRPFATINVALETDEEPPDLIGGNVKSVPKPIALEPCFGNKAAVLSIFVRLP
RGTGGIPPPGQSGLAVASALVDVSQQMCVGYKEKSGGLRNRKQQPTAQPSTCI
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgtacggggcgacgcggcgggcctgctcgggctctggccggggccggagcctgctgatg
ctgacaaccgcgctgctgctgtcggttgtcgggctgctctctgggcttcccggtgtcacc
gaagcgaaggaatgcgacaaaccgtgtatgaacgggcagtgcaacaccgctactggcaac
tgtgtgtgcttccccggctgggttggggaccaatgccagcactgcggagggcgattcagg
ctgacgggaccctctggttatctaaccgacggaccaggaaactacaagtataagaccaag
tgcacatggctcattgaaggacagcccaacaccatacttagattacggttcaaccacttt
gccacggagtgcagctgggatcacctgtatgtgtacgatggagactccatttacgccccc
cttctcgctgctttcagtggtttgattgttcctgagcgttatgggaatgagacagttccc
gaggtggtgtctcagtctggctacgccctgctgcacttcttcagtgatgctgcctacaac
ctgactggcttcaacatttcttacagggtgaatacatgtcccaacaactgctcaggccgt
ggtgagtgccgtgtgggaatctccagtgatttggtgtactgtgagtgtgaagccaactgg
aagggagaagcctgtgacgtcccctactgcctggccgagtgtggctaccccgagcgaggc
cgctgccagaacaagacctgcatctgtaagactggatggcaaggtccagactgttccatc
ccagtccctgccaattcctccttctggtcacgggaggagtacactgaggcaggactggct
agggcctcccacaaggctgtggtggaccagggcattatgtgggtcattgggggctacgtc
ttcaacgcctccgactatcacatggtcaaagcgtataacctcagcaacaagaggtggctg
accctcgacccctctgtcaacaccgtcacaccacgatatggccactcactggctcttcat
gaggggaagatcttcatgtacggaggaaagattgactcctcaggtaacgtgtccagccag
ctgtgggtttttcacatccaaaaccagacttgggtcctcctgagcccccgagccaaggat
cagtatgccgtggtgggacactcggcccacatcgtgcctcctgtccaagagggggccagt
cctgtcatgctggtcctgtttggacactgtcctctgtatggttacatcagccaggtccag
gagtacaacattgccaagaacacatggagcatggtgtctacagatggtgcactggttcag
ggcggctatggccacagcagtgtttttgaccctggcaccagagccatctacatccacgga
ggctacaaggccttcagcgccaacaagtacggcttggctggagacctgtacaagtttgat
gtggacaagagaaaatggaccattctgagagacagcggcttcttccgttacctccacacg
gcggttatagtgagcgggacgatgctcgtgtttggaggaaacacacacaacgatacgtcg
atgagccatggtgccaagtgcttctcctctgacttcctggcctacagtctggcgtgtgat
gagtggacagtgctgcctcgaccggacctctaccatgacgtcaaccgcttcgggcactct
gcagtcttcagtgacagtgtgatgtacgtgtttggcggcttcaacagcctgctgctcagt
gatgtcctcatgtacacctcgcccagctgcttggccttctccagccaggagtcgtgcagc
caggcctggccggggatccattgtgtctggaacagcacccaggcgacctgcctgccctgg
gagagcaacgctattggacctgaacagcagcagctaccggcctcctgtaatacaagatca
tatgttgataacgagagatgtgaccagtacacagactgctacagctgcactgccaacacc
aacggctgccagtggtgttcgagccaatgtgtttctctgggaagcaactgcacctctacc
acgggtgccataggggagtatgatgtttgccccaaagacaacccatcatatgtgtgcagc
aagaaaaccagctgcaagagctgtgctgtggatcagaactgtcagtgggaaccacgcaac
caggagtgcatctccctgccagaaaatgtatgtggtgaaagctggcatctggtgggcaac
tcctgcctgaagttcatcactgcgaaggactcatatgacaatgctaagctggcctgcagg
agccacaatgctgtcctggcctcactcaccacgcagaagaaggtggactttgtcctgaag
gagctgcagattatgagcatggtgtacaaggccacagtgactccctgggtgggcctcagg
aaaatcaacgtgtcgtactggtgctgggaggacatgtcgcccttcaccaacaccaccctg
cagtggctgcctggggagccgagcgatgccgggttctgtggctacctggccgagccggcg
tctagcggactgaaagctcaaacttgtattaacccagtgaacggcagcctgtgtgaacga
ccagcaaaccacagtgccaagcagtgccggacgccatgtgccatgcggaccacctgcagt
gaatgcaccagcagcagctcagagtgcatgtggtgcagcaacatgaagcagtgcgtcgac
tccaacgcctacgtggcttccttccccttcggacagtgtatggagtggtacaccatgaac
acttgtccaccggagaactgctctgggtacagaacatgtggccagtgtctggaccagccg
ggctgtggttggtgcactgaccccagtaacacgggcaaaggtcagtgtatcgagggctca
taccgtgggcccttccagacttcggtcccggccccatccaccctgcccggtctgcccgcc
agcccccagccggccctcaacgccagcatgtgccccagcgaggccaaatacaactggtcc
ttcattcactgcccagcttgccagtgtaacggtcacagtcagtgtgtcaacgagagtgtg
tgcgagaagtgcgaggacctgacaaccggccgacactgcgagagctgcatttccggcttc
tacggagatccgaccaacgggggcagctgccagccctgcaaatgtaacggccatgccagc
atgtgcaacccaaacaacggcaagtgtttctgcaccaccaagggcatcaaaggagatcgc
tgccacctgtgtgaagttgagaatcgttaccaaggcaaccccctcaaaggaacatgctac
tacacgctcctcatcgactaccagttcaccttcagcctgtcacaggaggacgaccgctac
tacaccgccatcaacttcgtggccacacctgaggagccaaaccgggatctagacatgttt
ataaacgcctccaagaacttcaacctaaacattacctgggccacaagcttcactgcagga
acccagaccggggaggagatccctatcgtctctcggagcaacattaaggagttcaaagac
agcttctccaacgagaacttcgatttccgaaacagcccgaacataacgttctttgtctat
gtcagcaactttacatggcccattaagatccaaatcgccttctcccagcacagtaacttc
atggacctggtgcaattctttgtcacattcttcagctgcttcctgtccctgctcctggtt
gccgctgtggtttggaagatcaaacagagctgctgggcgtcacggcgacgagagcaacta
ctgagggagatgcagcagatggcgagccggcctttcgccaccatcaatgtcgccttggag
acggacgaagagccgcctgacctgataggtggaaatgtcaagtctgtcccaaaacccatc
gccctcgagccttgctttggcaacaaagctgccgtgctctccatctttgtgcggttaccc
aggggcacgggcggcatccctcctccaggacagtctggtctggcagtggccagtgcgctg
gtggacgtgtctcagcagatgtgtgtgggctacaaggagaagtctggaggcctgaggaac
cgcaaacagcagcccaccgcacagccatccacctgtatctga
DBGET
integrated database retrieval system
