Lates calcarifer (barramundi perch): 108889221
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Entry
108889221 CDS
T04895
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108889221
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108889221
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108889221
Nuclear receptors [BR:
lcf03310
]
1. Thyroid hormone like
1D. Rev-Erb
108889221
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
108889221
NCBI-ProteinID:
XP_018541102
UniProt:
A0A4W6G4P4
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Position
LG15:complement(4241591..4248253)
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AA seq
605 aa
AA seq
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MPEDVGTAKPGGVIAYISSGSASSPESCMSSSPSSGYLATSPTLSRPSLPSRAVGMVVDI
APPAKNGHQRGHGMEKAGRSSTSAKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKG
FFRRSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFKKCLAVGMSRDAVRFGRIPKREKQ
RMLLEMQNAMNNMMSNNSQLHSMLHGHQSPTLPMETMTSDASSSSSSSSSSASDSLSCSN
PSSPQCPQDSESVVSMDTNSSSASSCASDSGEDEAVVATSRQHQDALAFSQQRSARRGQV
SPSPVTVALETGCDSRMEEQQEGWNCWNNNAVVGGYQHSPNSNSHHITNTAYREERGVYQ
HQPQQQLNSAPSCEPSEDSQRQHEFYTQTASNGYNGPTSHVNSRAHLVCPMNTSPYVDPY
KPSQEIWEEFSLSFTPAVREVVEFAKRIPGFRDLPEHDQVSLLKAGTFEVLMVRFASLFN
VVERTVTFLSGKRYSLDTLRSLGAGELLNSMCEFSEKLAALRLDADEMSLFTAVVLVSAD
RSGIQDLNSVEALQDKLIRALRNLIMQNHGDEAATTFTKLLLKLPELRSLNNMHSEELLS
FKVHP
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggacgttgggacagccaagcctggtggcgttattgcctacatttcctctggc
tctgcctccagcccagagtcctgtatgagcagcagccccagcagcggctacctggcaaca
tcacccactctgtctcgcccctcactgcccagcagggccgtgggcatggtggtggatatc
gctccaccagccaagaacgggcaccagcgtggtcacggcatggagaaggccgggcgctcc
tccacatcggccaagagcagcatcaccaaaatcaacggcatggtgctgttgtgcaaggtg
tgcggcgatgtggcctcgggcttccactatggcgtgcatgcttgtgagggctgcaagggc
ttcttcaggagaagcattcagcagaatatccagtacaagaagtgtcttaagatggagaac
tgcaccatcatgaggatcaacaggaaccgctgccagcagtgtcggttcaagaagtgtctg
gcagtgggcatgtccagagacgctgtccggtttggccgcatcccaaagagggaaaagcag
aggatgctgctggagatgcagaacgcaatgaacaacatgatgagcaacaacagccagctg
cacagcatgctgcacggccaccagagccccacgctgcccatggagaccatgaccagcgat
gccagctcctcgtcctcctcgtcctcctcctctgcttctgattccctgtcgtgctccaac
ccctcgtcgccgcagtgcccccaggactcagagtctgtggtttccatggacaccaactcc
agctctgcctcctcctgcgcatcagacagcggcgaggacgaggcagttgtcgcgacgagc
cggcagcaccaagatgccttagcgttcagccaacagaggtcagcgagacgaggccaggtc
tcgccctcgccggtcacagttgccctggagacggggtgcgacagccgcatggaggagcaa
caagagggctggaactgctggaacaacaatgcagttgtgggagggtaccagcacagtcct
aacagtaacagccaccacatcaccaacactgcttacagagaggagaggggagtttaccag
catcagcctcagcagcagctcaacagcgcccctagctgtgaaccgtcagaagacagccaa
agacagcatgaattttacacacaaactgcctcaaatggttataacggaccaaccagccat
gtgaatagtagagcacacttggtctgtccgatgaacacctcgccctacgttgacccctac
aaaccaagccaggagatctgggaggagttctccttgagcttcacccccgcggtgcgcgag
gtggtcgagttcgccaagaggatcccaggcttccgtgacctccccgagcacgaccaagtc
agcctcctgaaagctggaactttcgaggtgctgatggtccgatttgcttctctgttcaac
gtggtcgagcggacggtcaccttcctgagtggcaagcgctacagtctcgacacgctacgc
tcgctgggcgccggcgagctgctcaactccatgtgcgagttcagcgagaagctggcagcg
ctgcggctcgacgcagacgaaatgagtctcttcaccgccgtggtgctcgtatcagccgat
cgctcagggatccaggacctgaactcagtggaggccctgcaggacaaactgatccgggct
ctgcgaaacctgattatgcagaaccacggcgacgaggcagccaccactttcaccaaactg
ctgctcaaacttcccgagctgcgttcactcaacaacatgcactcagaggaactgctctct
ttcaaagtgcacccttga
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