Lates calcarifer (barramundi perch): 108889267
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Entry
108889267 CDS
T04895
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108889267 (si:dkey-159a18.1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
108889267
NCBI-ProteinID:
XP_018541153
UniProt:
A0A4W6E6I4
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Position
LG18:7999075..8008531
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AA seq
826 aa
AA seq
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MIWRLVVLGGVCVCLLAAEGKSRGGRTVTFRRTQRDESQGQVRARPRRETSGSSGTSKLS
HGPAFTSCRLPLTPTEHKVLDDNTHETGFNGDDGSYVILTWVGDGTGVILVLSTISTPLD
SFLEGGSSRLYRSTDYGKSFHDISQRINNTFIREEFGVSVGPGSSVILTADTAVVDNPGG
IIFTSTDAGATFKFIQLPFHLAQPITYHFLNHDYLVALSIDGGLWLSLDFGAKWTKVHDG
VHSFSWGAGVNLFFSCSRVDTVEADERGDLVLKRTKDLGKTFTTIHEDIFSFGYIGAFLF
FSVMEDSRSPRVMYFSSDQGDTFSRALLPSASTEQFYSILDGDEDMLFMHVDNPGDTYFG
TMYTSDDRGILFSKSLERHLFDGHRKSDFTNITSLRGVYLTNKLDKDGRIRSVISFNRGG
MWRQLNKPENVDCTEQTKNCNLHIHGEHSRNNRIVPMLALSEPTAIGLVIAHGTVGDSLS
SSQHPDVFVSSDGGYNWRGTLRGPHHYSILDSGGLIVAVEAQREGQVKTIKFSTDEGQCW
KSYNFTEQPFFFAGLASEPGTKAMNVSVWGFRPEEDGQPMWVAVTIDFQSLITRECNDQD
YEEWLAHSIEGEDSERNGCILGIKETYRRLKKQSVCRNGKSFVVSKKQSPCLCTREDYLC
DYGYYRHVNTSECVRQPNAANKTLEICLNGEEDELLTAGYRKVPSDKCEGGFTPQHAVQT
VIRPCGVKPSPGPPARSSSPETHFDTPRERLVLILVCAGAGVIVLVAIISALLAVKRVVY
RNRTPAYRFSNLRIQDDENGMTADLESATSSNGTVCQPDSDDDLIE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgatctggagactcgtggtcctcggcggggtgtgcgtctgtcttctggccgccgaaggc
aagagccgcggggggaggacggtgactttccgccggactcagcgggatgagagccagggc
caagtgcgcgcacgccccagaagagaaaccagcggctcgtcaggcacatccaagctttct
cacggtcctgccttcacgtcctgccggctccccctcaccccgaccgaacacaaagttctg
gatgacaacacgcacgagacagggtttaatggtgatgacggctcctatgtaatcctcaca
tgggtgggcgatggtacaggagtgatcctggtgctgtctacgatcagcactcctctcgat
tcttttctagaaggaggctcctctcgtctttacaggagtacggattacggaaagtcgttc
catgacatttcccaacgcatcaacaacactttcatacgggaggagtttggagtcagtgtc
ggaccggggagctctgtgatattgacagcggacacggcggtggtggacaacccaggaggg
atcatcttcacctccacagatgccggcgcgaccttcaagttcatccagctgcccttccac
ttggctcagccaatcacgtaccacttcctcaaccatgactacctcgtggctctcagcatt
gatggcggtctgtggctctctctggactttggtgccaagtggacaaaagttcacgatgga
gtacattctttctcatggggggctggcgtcaatttgtttttcagctgcagtcgagtagac
acagttgaggcagacgagagaggagacttagtgctgaagaggactaaggatctgggaaag
accttcaccacgatccatgaggacatcttcagttttggctacataggagcctttctcttc
ttctctgtcatggaagactcaagatcccctcgtgtcatgtacttctcatccgaccaggga
gataccttcagtcgagcactgctgccctctgcttccactgagcagttctactccatcctg
gatggagatgaggacatgctcttcatgcatgtggacaacccaggagacacctactttggg
actatgtatacatcagatgaccgcgggatcttgttctccaaatctctggagcgccacctg
tttgacgggcataggaagagcgacttcaccaacatcacctcactgaggggggtgtacctc
accaataaactggacaaggacggtcgcataagatctgtcatttcctttaacagaggaggg
atgtggcgacagctaaataaaccagagaacgtggactgcacagagcaaactaagaactgc
aaccttcatattcatggagaacacagtcggaacaaccgaatagttcccatgcttgctctg
tctgagccgactgctatcggcctggtcatcgcccatggaactgtgggcgattctctgtcc
tcatcgcagcacccagatgtgtttgtgtcctcagacgggggttataactggagggggaca
ctgaggggcccccaccactacagcatactggactctggtggtctcattgtggctgtggag
gctcagcgtgaaggacaagtcaagactatcaagttttccacagatgagggccagtgctgg
aagtcgtataacttcacagagcagccgttcttcttcgctggcctggcgtctgagccgggc
accaaggctatgaacgtcagcgtgtggggcttccggcccgaggaagacggccagcccatg
tgggtggctgtcaccattgactttcagagtctcattaccagagagtgtaacgaccaggac
tatgaagagtggttggctcattctatagagggagaagactcagagagaaacggttgtatc
ctgggcatcaaggagacttacaggaggctaaagaaacaatctgtgtgcaggaatgggaaa
agctttgtggtgagcaagaagcaaagcccctgcttgtgcaccagagaagattacttatgt
gactatggctactatcgccatgtgaacacttcagagtgtgtgcgacagcccaacgctgca
aacaaaactttggagatctgtttgaacggggaggaggatgagctactgacggcagggtat
cggaaggtcccgagtgataagtgtgagggggggttcactcctcagcatgcagtacagaca
gtcatcagaccctgtggtgtgaaacccagccctggcccacctgccaggtcatcgtctcca
gagacacactttgacacaccgagagagaggctggtgttgatcctggtgtgtgcaggagca
ggggtcatcgtcctggtagccatcatttccgctctccttgctgtcaagcgagtggtttat
agaaacaggacacccgcgtatcgtttctccaacctccggatacaggatgatgagaacggc
atgacagcagatcttgagagcgccaccagcagcaatggcacagtctgccaaccagactca
gacgatgatcttattgaatga
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