KEGG   Lates calcarifer (barramundi perch): 108889267
Entry
108889267         CDS       T04895                                 
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin
  KO
K12388  sortilin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04142  Lysosome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    108889267 (si:dkey-159a18.1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 VWC2L_1st
Other DBs
NCBI-GeneID: 108889267
NCBI-ProteinID: XP_018541153
UniProt: A0A4W6E6I4
LinkDB
Position
LG18:7999075..8008531
AA seq 826 aa
MIWRLVVLGGVCVCLLAAEGKSRGGRTVTFRRTQRDESQGQVRARPRRETSGSSGTSKLS
HGPAFTSCRLPLTPTEHKVLDDNTHETGFNGDDGSYVILTWVGDGTGVILVLSTISTPLD
SFLEGGSSRLYRSTDYGKSFHDISQRINNTFIREEFGVSVGPGSSVILTADTAVVDNPGG
IIFTSTDAGATFKFIQLPFHLAQPITYHFLNHDYLVALSIDGGLWLSLDFGAKWTKVHDG
VHSFSWGAGVNLFFSCSRVDTVEADERGDLVLKRTKDLGKTFTTIHEDIFSFGYIGAFLF
FSVMEDSRSPRVMYFSSDQGDTFSRALLPSASTEQFYSILDGDEDMLFMHVDNPGDTYFG
TMYTSDDRGILFSKSLERHLFDGHRKSDFTNITSLRGVYLTNKLDKDGRIRSVISFNRGG
MWRQLNKPENVDCTEQTKNCNLHIHGEHSRNNRIVPMLALSEPTAIGLVIAHGTVGDSLS
SSQHPDVFVSSDGGYNWRGTLRGPHHYSILDSGGLIVAVEAQREGQVKTIKFSTDEGQCW
KSYNFTEQPFFFAGLASEPGTKAMNVSVWGFRPEEDGQPMWVAVTIDFQSLITRECNDQD
YEEWLAHSIEGEDSERNGCILGIKETYRRLKKQSVCRNGKSFVVSKKQSPCLCTREDYLC
DYGYYRHVNTSECVRQPNAANKTLEICLNGEEDELLTAGYRKVPSDKCEGGFTPQHAVQT
VIRPCGVKPSPGPPARSSSPETHFDTPRERLVLILVCAGAGVIVLVAIISALLAVKRVVY
RNRTPAYRFSNLRIQDDENGMTADLESATSSNGTVCQPDSDDDLIE
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgatctggagactcgtggtcctcggcggggtgtgcgtctgtcttctggccgccgaaggc
aagagccgcggggggaggacggtgactttccgccggactcagcgggatgagagccagggc
caagtgcgcgcacgccccagaagagaaaccagcggctcgtcaggcacatccaagctttct
cacggtcctgccttcacgtcctgccggctccccctcaccccgaccgaacacaaagttctg
gatgacaacacgcacgagacagggtttaatggtgatgacggctcctatgtaatcctcaca
tgggtgggcgatggtacaggagtgatcctggtgctgtctacgatcagcactcctctcgat
tcttttctagaaggaggctcctctcgtctttacaggagtacggattacggaaagtcgttc
catgacatttcccaacgcatcaacaacactttcatacgggaggagtttggagtcagtgtc
ggaccggggagctctgtgatattgacagcggacacggcggtggtggacaacccaggaggg
atcatcttcacctccacagatgccggcgcgaccttcaagttcatccagctgcccttccac
ttggctcagccaatcacgtaccacttcctcaaccatgactacctcgtggctctcagcatt
gatggcggtctgtggctctctctggactttggtgccaagtggacaaaagttcacgatgga
gtacattctttctcatggggggctggcgtcaatttgtttttcagctgcagtcgagtagac
acagttgaggcagacgagagaggagacttagtgctgaagaggactaaggatctgggaaag
accttcaccacgatccatgaggacatcttcagttttggctacataggagcctttctcttc
ttctctgtcatggaagactcaagatcccctcgtgtcatgtacttctcatccgaccaggga
gataccttcagtcgagcactgctgccctctgcttccactgagcagttctactccatcctg
gatggagatgaggacatgctcttcatgcatgtggacaacccaggagacacctactttggg
actatgtatacatcagatgaccgcgggatcttgttctccaaatctctggagcgccacctg
tttgacgggcataggaagagcgacttcaccaacatcacctcactgaggggggtgtacctc
accaataaactggacaaggacggtcgcataagatctgtcatttcctttaacagaggaggg
atgtggcgacagctaaataaaccagagaacgtggactgcacagagcaaactaagaactgc
aaccttcatattcatggagaacacagtcggaacaaccgaatagttcccatgcttgctctg
tctgagccgactgctatcggcctggtcatcgcccatggaactgtgggcgattctctgtcc
tcatcgcagcacccagatgtgtttgtgtcctcagacgggggttataactggagggggaca
ctgaggggcccccaccactacagcatactggactctggtggtctcattgtggctgtggag
gctcagcgtgaaggacaagtcaagactatcaagttttccacagatgagggccagtgctgg
aagtcgtataacttcacagagcagccgttcttcttcgctggcctggcgtctgagccgggc
accaaggctatgaacgtcagcgtgtggggcttccggcccgaggaagacggccagcccatg
tgggtggctgtcaccattgactttcagagtctcattaccagagagtgtaacgaccaggac
tatgaagagtggttggctcattctatagagggagaagactcagagagaaacggttgtatc
ctgggcatcaaggagacttacaggaggctaaagaaacaatctgtgtgcaggaatgggaaa
agctttgtggtgagcaagaagcaaagcccctgcttgtgcaccagagaagattacttatgt
gactatggctactatcgccatgtgaacacttcagagtgtgtgcgacagcccaacgctgca
aacaaaactttggagatctgtttgaacggggaggaggatgagctactgacggcagggtat
cggaaggtcccgagtgataagtgtgagggggggttcactcctcagcatgcagtacagaca
gtcatcagaccctgtggtgtgaaacccagccctggcccacctgccaggtcatcgtctcca
gagacacactttgacacaccgagagagaggctggtgttgatcctggtgtgtgcaggagca
ggggtcatcgtcctggtagccatcatttccgctctccttgctgtcaagcgagtggtttat
agaaacaggacacccgcgtatcgtttctccaacctccggatacaggatgatgagaacggc
atgacagcagatcttgagagcgccaccagcagcaatggcacagtctgccaaccagactca
gacgatgatcttattgaatga

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