Lates calcarifer (barramundi perch): 108889283 Help Entry 108889283         CDS       T04895                                  Name (RefSeq) aggrecan core protein isoform X1   KO K06792   aggrecan 1 Organism lcf  Lates calcarifer (barramundi perch) Brite KEGG Orthology (KO) [BR:lcf00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:lcf00535]     108889283    00536 Glycosaminoglycan binding proteins [BR:lcf00536]     108889283    04091 Lectins [BR:lcf04091]     108889283 Proteoglycans [BR:lcf00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    108889283 Glycosaminoglycan binding proteins [BR:lcf00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    108889283 Lectins [BR:lcf04091]  C-Type lectins   Lecticans    108889283 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF PGDH_inter EGF_TEN Motif Other DBs NCBI-GeneID:  108889283 NCBI-ProteinID:  XP_018541174 UniProt:  A0A4W6FWW1 LinkDB All DBs Position LG10:complement(5049404..5065285) Genome browser AA seq 1328 aa AA seqDB search MTPLLLLCVSLPLITATISFEDHDDLDGTLRVSIPMEMPLRPLLGGKVVVPCYFQDNTAN DPGAPTIAPLSHRIKWSYVTKEKVSTILVASEGKVQVDTEYLDRVTMVNYPLVPTDATME ITELRSKDSGTYRCEVMLGIEDNYDSVDIQVQGIVFHYRAISTRYTLTFEKAKAACIQNS ATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPRERCYGDKETFPGVRTYGVRDAN ETYDVYCFAEKMSGRVFYSTSVEKFTFYEAGDQCAKLGARLATTGELYLAWKAGMDVCNA GWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSQYDAICFQAGEDEDVVP ARTTPFPDIIRMTPAPGVYPEITPSPGGEEIRGGDVDTLSPLPVPPSVTDTYTRVTPVVR EPGLDLIGIDTAMAPTGVVFHYRPITGRYTLTFLEAQQACKSIGAVIASPQQLQAAFEKG LHQCDAGWLRDQTVRYPIVSPRDNCAGNLPHLPGVRSYGLRPASERYDVFCYVERLQGEV FFTSDYDSFSYEEAVQHCQNLNTTLATPGQLYAAWNQGLDKCRPGWLMDRSVRYPITTPR SHCGGGQVGVHIIYAYPNQTGFPDEHSRYDAYCFKAEIPVVHIENETSVNLTIVTEEVIN KTITTVDQVAPTVETTVVYNETEISVNITEVFINKTTITKQEVTPTVIPTLPPVPVDVSG SGSADHSASGEISGESGVSSTSGDISGSGQDITYSGHIDIFSGDQSASGGPQEAEGGSAV ILTSGDQGSASGSGEGIDGRHSGFEVSGSGFISGSGDISGSSGDLIIIMVDGKMVEVSKT HKPDEQLLDKEGIESIELSASGSGILSGSGSGEFSGISFVDHSAIDLSVQPSGEQEVSGY RPFGSGFHSGFPSGFPSGVSGSGSASGDSFQQRGDVIYVTDDEMIEVTMPPLVRHPEQGR GVVEVSGAGSGSGIHHEFSGTLEQSLLLSGSGAPHDKPLIEKLSVTLPPGSTMTYSEYLA SLGQSGLGEDEQEGHTVHVVTPDTAYTSPTTAPSVSLATPSVVEKPEVVEASADPCDPNP CGSGSCSVQGELAVCQCPNGFTGEDCSTPVQGCAEGWLEFMGNCYLHFAERYTWSDAEQR CQELNAHLVSISSQEEQQFVNSNGQDYQWIGLNDKDVQNEFRWTDRSPLTFENWRPNQPD NYFNSEEDCVVMIWHEGGQWNDVPCNYHLPFTCKTGPVMCGAPPEVEHARPMGSSRERYP VNSIVRYQCDAGYTQRHLPVIRCMPDGQWGEPQVECTEAGTNSNRLHKRSLRRRSKGFSS QREQRKLL NT seq 3987 nt NT seq  +upstreamnt  +downstreamnt atgacccccttgcttctgctgtgtgtgtccttgcccctcataacagcaacaatatcattt gaagatcacgatgacttggatggcacattgcgtgtcagcatccctatggagatgcctctc cggcctctgcttggaggcaaggtagtggtaccgtgttacttccaggacaacaccgccaac gaccccggagccccgaccatcgcccccctctctcatcgcatcaaatggtcctatgtcacc aaggagaaagtctccaccatcctagtggcgtcagaggggaaagttcaggtggacacagag tatttggacagagtgacgatggtcaactaccccctggtgcccactgatgccaccatggag ataacagagctgaggtccaaagattctggcacctaccgctgcgaggtgatgctcggcatc gaggataactacgactcagtggacatccaggttcagggtattgtcttccactaccgagcc atctccacccgctacaccctgacgtttgagaaggccaaggcagcctgtatccagaacagc gccaccattgccactccagcccagctccaggctgcctacgacgatggataccatcagtgt gatgccggttggctctctgatcaaactgttaggtaccccatccatgagccacgggagcgt tgctatggagacaaggagaccttcccaggcgtgagaacctatggagtgagagacgccaac gagacctacgacgtgtactgttttgctgagaagatgtcaggcagagtcttctactccaca tctgtagagaagtttactttctacgaagcaggagatcagtgtgccaaactcggcgcccgg ctcgctaccaccggagaactttacctggcctggaaggccggcatggatgtgtgtaacgct ggctggctggcagacaggagcgtgcgttaccccattaacatcgccaggcctcagtgtgga ggggggcttctgggagtgagaacagtctacttgttccccaaccagacaggatacccctac ccagactctcagtacgatgctatctgcttccaagctggtgaggatgaagatgttgtacct gcgaggaccacccctttcccagacatcatccgcatgacaccagctcccggggtgtaccca gaaatcactccctcacctgggggtgaagagatcaggggtggagacgtggacaccctctcc ccactgcccgtcccacccagtgtgacagacacatacactagagtgactcctgttgtgcgt gagcctggactcgatctgataggcatcgataccgccatggcgcccacaggtgtggtcttc cactaccgacccatcactggtcggtacactctgacctttctggaggctcagcaggcctgc aagagtattggagcggtcattgccagcccccagcagctgcaagcagcctttgagaaaggc ctgcatcaatgtgacgccggctggctccgtgaccagactgtcaggtatccaatcgtgtca cccagagataactgtgcaggtaatctgccacaccttccaggagtcaggtcttacggcctg agaccagccagcgaacgttacgatgtattttgttacgtggaacgtctccaaggtgaggtc ttcttcaccagtgactatgacagcttttcctacgaggaggctgtgcagcactgtcagaac ctgaacaccaccctggccacccccgggcagctgtacgctgcctggaaccagggacttgac aagtgccgtccaggctggctgatggaccgcagtgtccgttaccccatcacaacccccagg tcccactgtggaggcggccaggtgggggttcacatcatctacgcctaccccaaccagaca ggattcccggatgagcactcacgctatgacgcgtactgtttcaaagctgagattccagtt gttcacattgaaaatgaaaccagtgtgaatctgacaatagtgacagaagaggttatcaat aaaacaatcaccacagttgatcaagttgctcccactgttgaaactactgtagtctacaat gaaactgaaatcagtgtaaacattactgaagtttttatcaacaagacgacgatcacaaaa caggaagttactcccacagtgatacccactttacccccagtccctgttgacgtgtcaggc tctggttcagccgatcattcagccagcggggagatctcaggagagtctggcgtctccagt accagtggtgacatctctggctcaggacaggacatcacctacagtggacacattgacatc ttctccggagaccagtctgcttctggaggtccccaggaggcagagggaggaagtgctgtc atcctcacatctggagaccagggtagcgcttctggatctggggaggggattgatggacga cattctggctttgaggtatcaggatcaggttttatcagcggaagtggggacatcagtggt agcagtggagacttgatcatcatcatggtggacggaaagatggtggaggtgtcgaaaacc cacaaacctgatgagcagttgttagacaaggaaggcattgagtcaatcgaattaagtgca tctggatcaggaattctgtcagggtcaggttctggtgagttttctggcatctcatttgtc gaccacagtgccattgacctgtcagttcagccatctggtgagcaggaggtgtccggatat cgtccttttggatctggattccacagtggcttccccagtggttttccatctggtgtttcg ggcagcggctctgcttctggagattctttccagcaacgtggcgatgtcatctatgtaaca gatgatgagatgattgaagtgaccatgccaccactggtacgccaccctgagcagggtcgg ggggtggtggaggtgagtggagcaggaagtgggtcaggcatccaccatgaattcagtggc actttggagcaaagcttgcttctctctgggagcggagcccctcatgataaacccctcatt gaaaaactttctgtcaccctgccgcctggatctaccatgacctactcagagtacttagcc agtcttggtcaatctggacttggggaggatgaacaggaaggccacacagttcatgttgtg actcccgacacagcctacaccagcccaaccacagcaccatcagtgtcattagcaaccccc tctgtcgtggagaagcctgaggtagtagaagcctccgcagacccttgtgatccgaaccct tgtggatcaggatcctgttctgtgcagggagagctcgctgtatgtcagtgtcccaacggc ttcactggtgaagactgctcaacaccggtgcagggctgtgctgagggctggcttgagttc atgggcaactgctaccttcactttgcggagagatacacctggtctgatgctgagcaacgc tgtcaggagctcaatgctcacctggtcagcatcagctcccaggaggagcagcagtttgtc aactccaatggtcaggattaccagtggattggactcaatgacaaagatgtgcagaatgag ttccgctggacagacagaagtcctctgacctttgagaactggaggcccaaccagccggat aactacttcaactctgaggaggattgtgtggtgatgatctggcatgagggcggacagtgg aatgatgtgccctgcaactaccaccttcccttcacctgcaagactggaccagtcatgtgt ggcgctccccctgaggtggaacatgcccgaccaatgggcagcagcagagagcgctaccct gtcaactctatagtccgctaccagtgtgatgcaggctacacacagcgccacctgccggtc atacgctgtatgccagacggacagtggggggaaccacaggtggaatgtacagaagccggc accaacagtaacaggctacacaaaagatccctcaggaggagaagtaaagggttcagcagc caacgggaacagaggaagttgctctga

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