Lates calcarifer (barramundi perch): 108889328
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Entry
108889328 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 44-like
KO
K24224
cilia- and flagella-associated protein 44
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108889328
Cilium and associated proteins [BR:
lcf03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
108889328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
108889328
NCBI-ProteinID:
XP_050923306
UniProt:
A0AAJ8DLM1
LinkDB
All DBs
Position
Unknown
AA seq
1703 aa
AA seq
DB search
MKVIRDFVSVLHSFSYDAARRSNLQLLDDTTLIFIAGNLLVLLDISTKEQRYLRSCSGGG
IGSITTHPSKQYFVAAEKGNQPNIIVYEYPSLRPHRILRGGTERAYSFVDFNHDGSLLAS
VGSAPDYMLTLWNWRQEEVMLSCKAISQEVYRVSFSPYNPGLLTSSGSGHIKFWKMASTF
TGLKLQGLMGHFGKMAATDIEGYVELPDGKVCGVRHTNLLLWDGNAIKVEICRKEGRTCH
AGMVQPFALEDGQLMTIGSDGLLQGWDFESIDAGXSNSESSRFEMEPMNEMVVGHNVCLS
SVTRSSLPDSFIWFAQDSSGAIWKLDLSFTYTTPDPECLFSFHSGPIQGLDVSKKSYLMA
TTALDRSVKVFDFLAKRELTTSRFNQGGTALSWAPPLVNQSGGLLVTGFEDGVVXLLELY
DPQRLHVVAGAAXKGDAKLRLKQAFKPHNAPVTAVAYERNGDILATGLRLHSVLLHRPAE
KYNPIGFVQVPGAVQGPGVVTLIPTVKNRLLILCQSGHVVEVHSPDPDAQKADQNLQAAR
SCPGRSFRERRRSRDVKPQRRRRGRRERKRLKESKQPEEQEEEEEEEEELPPIYIPDPPS
PLYCGFYSQPGQFWLSMGGFDSGFLYHCKFSENQDEDPDERQDEPFDFLPVHNTDDDPIR
SVTFSSDRQLLLCGMHSGSVRVYLLQPADHSLTSMQAYWALSVHDNQYGHLRHIRCSHDD
HFVLTAGDDGNIFSFSLLPPEECRKSLQRRRAKVPSPRVGLENEVLAQDIEDPAAYSIET
AKQKLEKDRLRREAELKITGKRKKLAELQKKFKELLNHNQSLPEHELQLDRRFHEQAERV
KSQWVMEVRKQLGWEEERSCVGLSKLQDWFRDSLEANMVTVVAIRTDHRLSTYRLPTLAK
PSADLRRQSTSSRPDRDRDAAPERRNPEPSRREVLRPKVARPAAVKLGDRQMERLRKAAE
KAEQARAKIEKRKQEWAQLYAEKPDQNCEDPRDVQAIREAKENIGDLKLKSDKDFTVPKH
LRMNAERKRAELIGLEENIREKQTEMNRRIVALRDSKVRLVSQLHAQAQQLHKVQHGLAV
HLHRPPPALPTVLPEETPERRLQYSRATLERYRVLREQSFKGVQQEEQEGSTRLLEQLEK
EMKEEEEEKDDEERGEEETSVEEGVELSELEEELLREEEIRLLHEQDSLLEQMDTSVCQF
DAELLLLRHQKLRLDWQLKLADLHQLTLYQELLLLKEFERREDSLQEKLNGRIKEENSIT
SKLEECSEQLELKQRDIAKLQEREKALITAFQASLGENNKCEEFLTKVFKKKIKRVKKKE
QTGDEEEEADSDEDSDEDDDWDDDDFDSGSEEGGAALDDSVCPPGCDPELFENTLQLRER
RLDLEELLVEEKKSAEALKKECDTLAKKEKTVKNNRKTVEDDLELVNREKQQKMNELDVV
VPLRLHQIEFVVNDSVPSDLSPALVLDRTELGRLQERIKQLQVEKNQQRDLYFQARQQHV
KLIHDRKDMDTKIQVLDKQCNELMLMKYGRLVDVEALQTLSGNRTLEELKQEKLQREAAY
AKEIKQWDAKVEEAHQALMDVTKCNTERLLSVTNLFDQKKELDHKLNARQKKMGRQFQDY
RRRMDQEEIRRLQALVKTQSQQAEALRREIGLLSRKGGHVLPPSYAPLPPLAPLPTPADR
KQGPARPSKLLKAQNSPSRHGAI
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaattagagactttgtaagcgtacttcactccttcagctacgacgcggcgcgc
aggtcaaacctgcagctgctggacgacacaactctgatcttcatcgcaggaaacctcctc
gtcctcctcgacatttccaccaaggagcagagatacctgcgctcctgcagcggaggagga
atcggctccatcacgacacacccaagcaaacagtactttgtcgcagcagagaagggaaac
cagcccaacatcatcgtatatgagtatccctcgttacgaccgcaccgcatcctcagaggc
ggcaccgagcgggcgtacagcttcgtggactttaaccacgacggcagcctgctggccagc
gtgggcagcgcgcccgactacatgctgacgctgtggaactggaggcaggaggaggtgatg
ctgagctgcaaggccatttctcaggaggtctacagagtcagcttctccccgtacaaccca
ggactgctcacatcgtcgggatctggacacatcaagttctggaaaatggcgagcaccttc
acaggtcttaaattgcaggggctcatggggcattttgggaaaatggcagcgactgatatc
gagggctacgtggagcttcctgatggaaaggtctgtggtgtccggcacaccaacttgctg
ctgtgggatggaaacgccattaaagtggagatttgccgtaaggagggtcggacctgccac
gccgggatggttcagccgttcgctctcgaggatggacagctgatgacgattggctctgac
ggcctcctgcagggctgggactttgagagcatcgacgccggcnncagcaacagcgagagc
agcaggtttgagatggagcccatgaacgagatggtggtcggacacaacgtctgcctctcg
tctgtgaccaggagctccctgcccgactccttcatctggttcgctcaggattccagtgga
gccatctggaaactggatctgtcgttcacctacacgactccggatcctgagtgcctgttt
tccttccattccggtccgatccagggcctggacgtgtccaagaaatcctacctgatggcc
acgaccgctctggaccgctcagtcaaagtctttgacttcttggccaaacgagaactgacc
accagccgcttcaaccagggtgggactgctctcagctgggctccacctctggtgaaccag
agcggaggtttactggtgacgggctttgaggacggtgtggtcnncctgctggagctgtac
gaccctcagaggctgcacgtggtcgccggcgcagccnccaaaggagacgccaagctgcgc
ctcaaacaagccttcaagccccataatgcacctgtaactgctgtggcgtatgagagaaat
ggagacatcttagccacggggctcagactgcacagtgttcttcttcaccgtccggccgaa
aaatacaaccccatcggcttcgtccaagttcccggggccgtgcaggggcctggagtggtc
accctcattcccacggtgaaaaacaggctgctcatcctgtgtcagagcggtcacgtggtc
gaggtgcacagtcctgatccggacgcccagaaagccgaccaaaaccttcaagctgcccga
agctgccccggcagatccttcagagagaggaggagatcgcgagacgtcaagccgcaaagg
agaagaagaggaaggagagagaggaagaggctgaaagagtcgaagcagccagaggagcaa
gaggaagaggaggaggaagaagaggagttaccacctatctacatccccgaccctccgagt
cctctctactgtggcttctactcacagcccggacagttctggctctcaatgggaggcttt
gactcaggtttcctgtaccactgtaagttctctgagaatcaggatgaggatccagacgaa
cgacaggatgagccctttgacttcctgcccgttcacaacacagatgacgaccccattcgc
tccgtcaccttcagctccgacaggcagctgttgctctgcggcatgcactcagggtccgtc
agggtttacctgctgcagcccgctgaccacagcctcacctccatgcaggcctactgggct
ctgagcgtccacgacaaccagtacggacacctgcggcacatccgctgcagccacgacgac
cactttgtgctgacggccggagacgacgggaacatcttctccttcagcctgctccctcca
gaggagtgcagaaaaagcctgcagaggaggagggccaaggttccctcgcccagggtgggt
cttgaaaatgaggtgttggcccaggacattgaagacccagcagcttacagcatagaaacg
gctaaacagaagctagagaaggaccgactgcgtcgagaggccgagctgaagatcacaggg
aagcggaagaagctggctgagctccagaagaagtttaaagagctgctgaaccacaaccag
agtctgccggagcacgagctgcagctggatcggcgtttccatgaacaggcagagcgggtg
aagtcccagtgggtgatggaggtcaggaagcagctgggctgggaggaggagcgctcctgc
gtaggactcagcaaactacaggactggttcagggactctctggaggccaacatggtcacc
gtggtcgccatccgcaccgaccacagactctccacctaccgtttgccgacgctcgccaaa
ccgtcagcggatctccgacgtcagagcacctccagccgaccggacagagacagagacgcc
gctccggagcgcaggaatccagagccgagccggagggaggtgctgcgccctaaggtggct
cgtccagcagcggttaaactgggagatcggcagatggagaggctccgaaaggcggcggag
aaagctgaacaagctcgagccaaaatagagaagaggaagcaggaatgggcccaactttac
gcagagaaaccagaccagaactgtgaggatccgcgggacgtgcaggccatccgtgaagcc
aaggagaacattggagacttaaagctgaagtcggacaaagacttcacggtgccgaagcac
ctgaggatgaacgctgagaggaagagagcggagctgattggcctggaggagaacatccgg
gagaagcagactgagatgaacagacgtatcgtggcgttgcgggactccaaggttcgcctg
gtgtctcagctgcatgctcaggctcagcagctccacaaggtccagcatggtctggcggtc
catctccaccggcctccacccgccctgccgaccgtactaccagaggaaactccggagagg
aggctgcagtacagccgggccaccctggagagataccgggtcctgagggaacagagtttt
aagggcgtgcagcaggaggagcaggagggaagcacacggctgctggagcagctggagaag
gagatgaaggaggaggaggaggagaaagatgatgaggagagaggagaagaagagacatca
gtggaggagggagtggagctgagtgagctggaggaggagctgctgagggaggaggagatc
aggctgctgcatgagcaggactccctgctggagcagatggacacttcagtgtgtcagttc
gacgcagagctgctgctgctgcgtcaccagaagctgcgtctggactggcagctgaaactg
gccgacctccatcagctgacgctctaccaggagctgctgctcctcaaggagttcgagagg
agggaggacagcctgcaggagaagctcaacggacgcatcaaggaggagaacagcatcacg
tccaaactggaggaatgcagtgaacagctggagctgaagcagagagacatagccaaactg
caggagagagagaaagctctgatcacggccttccaggcctcgctgggcgaaaacaacaag
tgtgaagagtttctgaccaaagtcttcaagaagaagatcaaacgtgtcaagaagaaggag
cagaccggagatgaagaagaagaagcagacagcgatgaagactcggatgaagacgacgac
tgggacgatgatgattttgacagcggctcagaggaaggaggagcagctctggacgacagc
gtctgtcctccgggctgcgacccagagctgtttgaaaacacgctgcagcttcgtgagcgt
cgcctggacctggaggaactgctggtggaggagaagaagagcgccgaggctctgaagaag
gagtgtgacaccctcgccaagaaggaaaaaacggtgaagaacaatcgaaaaacagtggaa
gacgacttggagttggtcaacagagagaaacagcagaagatgaacgagctggatgtggtg
gttcctctcaggctgcaccagatcgagtttgttgttaacgactcggtgccgtccgatctg
agcccggcgttggttctggacaggacggagctgggcaggctgcaggagcggatcaagcag
ctacaggtggagaagaaccagcagagagatctgtactttcaggcccggcagcagcacgtc
aagctcatccacgaccgcaaggacatggacacaaagatccaggtgctggacaagcagtgc
aacgagctgatgttgatgaagtacgggaggctggtggacgtggaggctctgcagacactg
tcggggaacaggacgctggaggagctcaagcaggaaaaactccaacgcgaggcagcgtac
gccaaggagatcaaacagtgggatgcaaaggtcgaggaggcgcatcaggctctgatggat
gtgaccaagtgtaacacagaacgtctcctcagtgttacaaacctctttgaccagaaaaag
gagctggaccataaactcaacgccaggcagaagaaaatgggcagacagttccaggattac
aggaggcgtatggatcaggaggagatccgaaggctgcaggcgctggtgaaaacacagtcg
cagcaggccgaggccctcaggagagagatcggcctcctctcccgtaaaggaggccacgtc
ttgccccccagctatgccccgctgcccccactcgcccccttaccgacccctgcagaccgt
aagcaaggtccagcgcgtccatccaaacttcttaaagcacaaaactcacccagcagacat
ggagctatttaa
DBGET
integrated database retrieval system
