Lates calcarifer (barramundi perch): 108889336
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Entry
108889336 CDS
T04895
Symbol
tgfa
Name
(RefSeq) protransforming growth factor alpha isoform X1
KO
K08774
transforming growth factor, alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04012
ErbB signaling pathway
lcf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108889336 (tgfa)
04012 ErbB signaling pathway
108889336 (tgfa)
04020 Calcium signaling pathway
108889336 (tgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108889336 (tgfa)
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Growth factors (RTK binding)
108889336 (tgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
EGF_Teneurin
Kelch_KLHDC2_KLHL20_DRC7
EGF_laminin
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
108889336
NCBI-ProteinID:
XP_018541246
UniProt:
A0AAJ7PXL1
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Position
LG12:24044307..24050417
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AA seq
263 aa
AA seq
DB search
MTRIFWDTIFLISGTFSMSVVFNGSLFTFGAGPSNSTIIEARISIDTNSTAAPNTSMGSS
ATTGSASTTTITTTSDVPVVKNSLFTFGAGQTDSQIIDAVISIDTNSSAAPNTSTTSSAT
TSSRGTTATTTATTTTSIPPVKKFVAAAVRSHFDDCPDSHRHFCFHGTCRFLILEETPAC
VCHPGFVGMRCEHADLLAVVATNHRQQTVATVLVLCVIGCVLIMVLCTLLHCWWRQDCRR
RRHALHYIPEKHGASYYPSESVV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggattttctgggatacaatttttctcataagcggtacttttagtatgtctgtg
gtattcaatggttcactctttacatttggagctgggccgagcaattcgacaatcattgaa
gctcgcatttccatcgatacaaactccaccgctgctccaaacacctccatgggcagctct
gcaacaactggcagcgcaagcaccacaacgattacaaccacaagtgatgtccctgtggtt
aaaaattccctctttacatttggagcagggcagaccgattcacagattattgacgctgtc
atttccatcgacacaaattcctctgcagctccaaacacatcaacaaccagctctgcaaca
accagcagcagaggcaccaccgccacaactactgcaactacgaccactagcatcccccca
gttaaaaagtttgtggctgcggctgttcggtctcatttcgatgactgtccagactcccac
cgccatttctgcttccatggcacatgccgcttcctgatattagaggagacacctgcatgc
gtgtgtcatccaggcttcgtcgggatgaggtgtgaacatgccgacctgctcgctgtggta
gcaactaatcacagacaacagaccgtcgccacagtgctggtgttgtgtgttattggctgt
gttctgatcatggtgttgtgtacacttttacattgctggtggagacaggactgtcgcagg
cggagacacgcactgcactacatcccagagaagcacggagcatcctactatccatctgag
agtgtggtttga
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