Lates calcarifer (barramundi perch): 108889363
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Entry
108889363 CDS
T04895
Symbol
rereb
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108889363 (rereb)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108889363 (rereb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
ELM2
GATA
CCDC47
DUF7573
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
108889363
NCBI-ProteinID:
XP_018541295
UniProt:
A0A4W6DBN8
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Position
LG12:complement(23902381..23912230)
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AA seq
1192 aa
AA seq
DB search
MDDLFSPRRSLNSTQGEIRVGPSHQAKLPELQPRPAPGLQTQTESEELMWTPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNMLHASHYDAAKALQRLVKKPL
PKLIEKCWSEGDVKHFIKGLRQYGKNFFRIRKDFLPSKKTGELITFYYHWKKTPEAAGTR
AYRQQRRQPSSRKAKTRSAAATVNTPSRNYSVDVSSASEDDLDSEDSEQDIKSCSHCGTT
SSKDWHQGRRDNPLLCTTCRTYENKHGCLPPASKSAGAPFMFKPVKEEEEVNSKHGMRTR
RSRAPQLSSLRSGHRRLTGSPTSEDQQSSNQPSPSGVTSSSLRSSSTDNKNESTKRTNKK
IKEEVMSPKTTKRVRESPAQEPEKVTPKRPKTQDPQGSRSEGEAEVEEESSSESRSAQDD
GSSDTKDIDQDNRSSSPSIPSPQQGNESDSDSSAQPNGVPSEPVAPAAVLADTPVPQALP
SQGPTITPQPLQSTPSADPAQSPPPPSPDPPQPAAGQSSATAGPNSRPQSASLSLCGPPP
LPSALGQDPPLFPAFQVPPALSSAQPLQSHGPLPQAPQRPPPFFRESQLPQPPLSGPQIK
PPPTTPIPPSHKQLPHQSATPFPQMPSNLPPPPALKPLNSLPNQHPPGAPPPPLQLMPQP
LPMQSLPTQLPVISQVQTHPGKSMTSSHPPAAASHPLTSVTSSAIGPVPSLQPSFTPLPL
RPTPSSTAGGSHVQIKEEPLDEMEEAESPPPPPRSPSPEPTVVNIASHASQSARFIKYLD
RGYNSCARTDLFFTPLSSSKLAKKREEAVEKSRREAELSARQEREREKDREREREREADR
NARASSSSHDSRMSEAQMSAQGHGRPSFEQPPTTVAAVPPYIGPDTPALRTLSEYARPHV
MSPTNRNHPFYVSLSPGDPLLAYHMPGLYSAEPSLRERELRNLRERELRERMKPGFEVKP
PDLETLHPSANPMEHFARHGALALPHIPGPPHPFAPFHPGLNHLERERMALAGPQLRPEL
SYAERLTAERLHAERMASVATDPAARLQMLNVTPHHHQHSHIHSHLHLHQQDPLSQGSSP
HPLVDPLTTGPRLARFPFPAGPIPNPLLSDLPHDHEMLRHPLFGAAYPRELQGPIPQMSA
AHQLQAMHAQSAELQRMALEQQWLHGHHLHGGPLPSQEDYYSRLKKEGDKPS
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctgttcagtccgcggaggagcctcaacagcacacagggtgagataagagta
gggccaagtcatcaggctaagctcccagagctgcagccacggcctgctcctggtttacag
actcagacagagagtgaggagctcatgtggacgcctggggtcaatgactgtgacctcctc
atgtacctcagagctgcaaggagcatggcggcgtttgcagggatgtgtgatggtggatcc
acagaggatggatgtttagcagcctcccgtgatgacaccacactcaacgctctcaacatg
cttcatgcaagtcattatgatgcagcaaaagctctccagcgtctggttaagaagcctctg
ccaaagcttattgagaaatgctggtcggagggtgatgtgaaacatttcatcaaaggcctg
agacaatatggaaaaaatttcttccgcatccgtaaagactttctacccagcaaaaagact
ggagagctgatcactttctattaccactggaagaaaactcctgaggctgcgggaacaaga
gcttatcgacagcaacgccgacagccgtcctcccgcaaggcgaagactcgctctgcagca
gctacggtgaacaccccatcgcgaaattattcagtggatgtgagttctgccagcgaggat
gatcttgatagtgaagacagtgaacaggatatcaagagctgcagccactgtggcacaaca
agttctaaagattggcaccaaggaagaagagataatcctttgctgtgcacaacttgtcgc
acttatgaaaacaaacatggatgtctgccgccagcttcaaaatctgcaggcgctccattc
atgtttaaacctgtaaaagaggaagaagaggtgaacagcaagcatggcatgaggacacgg
cgaagcagagcacctcagctgtcatctttacggagcggccacaggaggctcacaggctct
cccaccagtgaggatcagcagtccagtaaccagccttccccgagcggagtgacttctagc
tctctgagatcgtcctccacagacaataagaatgaatccaccaagaggacaaacaagaag
atcaaagaggaagtaatgtcaccaaagacaacaaaacgtgtacgagagagtcctgctcag
gagcctgaaaaagttacacctaagaggccgaagacacaggatccacagggctcccggtca
gagggagaggccgaggtagaggaggaaagctcttcagaaagccgcagcgctcaggatgac
ggcagcagtgacaccaaagacattgatcaggacaaccgcagctcctctcccagcattccc
agccctcaacagggcaatgagagcgactccgactcatctgcccagccgaatggcgtccca
tcagaaccagtcgcccctgctgccgtgttggccgacacgccggttccacaggccctcccc
tctcagggtcccaccatcactcctcagccactgcaaagcactccctctgctgatcccgct
cagagcccccctcctccttctccagacccccctcagccggcagccggtcagtcatctgct
acggcgggtccaaacagccgaccacagtcagcttctctctcactctgtggaccacctcct
ctgccatcagcactgggtcaggacccccctctttttccagcatttcaggtcccacctgct
ctcagctctgcgcagcctctgcagtcacatggcccgttgcctcaggccccccagcgaccc
ccacccttctttagggagtcgcagctccctcagcctcctctgtctggcccgcaaatcaag
cctcctcccaccaccccaattccaccctcacacaaacagctgccacaccagtctgctaca
cctttcccccagatgccctccaatctcccccctccacctgctctgaagcccctcaattct
ctgcccaaccaacatcctccaggtgctccacctcctcctcttcagctcatgccgcagcct
ttgccgatgcagtcacttccaacccagcttccagtgatctctcaggtgcagacacaccct
ggaaaaagcatgacttcctctcacccaccggctgcagcctcacaccctctcacctccgta
acatcctctgctattggccccgtcccaagcctccagccatctttcacgcctcttcctctg
agacccacgccgagcagcactgcagggggatcacatgttcagattaaggaagagccactg
gatgagatggaagaggctgagagtccaccgcctccacctaggagcccctcgccagagccc
accgttgttaacattgcaagccacgccagccagtctgcacggtttatcaaatacttggat
cgtggttacaactcctgcgcgagaacggacttgttcttcactccactttcttcctccaaa
ctggccaagaaaagggaggaggcggtggagaagtcgaggagagaggctgaactcagtgct
cggcaagagcgtgagagggagaaagacagagagcgagagcgggagagggaggcagacaga
aacgcaagagcctcaagctcctcccatgacagtcgcatgagtgaggcccagatgtcagcc
caaggccacggacgcccctccttcgagcagccgcccaccacagtggctgccgtgcccccc
tacattggccccgatacacccgccctgcgcaccctgagtgaatatgcccgacctcacgtc
atgtcccccaccaaccgcaaccatcctttctacgtgtccctgagccccggtgaccccttg
ctggcctaccacatgcccggcctgtacagtgctgagcccagcctgagagagcgtgagctg
aggaacctcagagagagagagctccgtgagaggatgaagcctggcttcgaggtcaaaccc
ccagacctggaaaccttacacccctcggccaaccccatggagcactttgccagacacggc
gcacttgctcttccccacataccggggcctccccatccctttgcacccttccatcctggg
ctcaaccatctggagcgggagaggatggcgctggcaggacctcagctgcgcccggagctg
agttatgctgagcgactcactgcagagcggcttcacgcggaaaggatggcctccgtggcg
accgaccctgctgccaggctgcagatgctcaatgtgacgccgcatcatcaccagcactct
cacattcactctcacctccacctgcaccaacaggaccccctcagtcaaggttcaagccct
catcctctggtggaccctctgacaacaggaccacgtttggctcgattccccttccctgct
ggcccgatccccaaccctttactcagcgatcttcctcatgatcatgagatgctgcgccac
ccattgtttggagctgcatacccaagagagctgcagggcccgattcctcagatgtctgct
gctcaccagctccaagccatgcatgctcagtctgctgagctgcagaggatggctttggag
cagcagtggctgcatgggcatcacctgcatggaggccctctgccaagtcaggaagattac
tacagccgtctgaagaaagaaggtgacaagccatcttga
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integrated database retrieval system
