Lates calcarifer (barramundi perch): 108889366
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Entry
108889366 CDS
T04895
Name
(RefSeq) myosin heavy chain, fast skeletal muscle
KO
K24220
myosin heavy chain 1/2/3/4/8/13/7B/15
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04814
Motor proteins
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108889366
04820 Cytoskeleton in muscle cells
108889366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108889366
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108889366
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myosin_tail_1
Myosin_N
Rod_CreS
CCDC39
FKBP15
CCDC89
TPR
AAA_13
Fib_alpha
IQ
NPHP3_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
108889366
NCBI-ProteinID:
XP_050930154
UniProt:
A0A4W6DD49
LinkDB
All DBs
Position
LG12:23856384..23867849
Genome browser
AA seq
1936 aa
AA seq
DB search
MSVDPEMECFGPAAVYLRKPERERIEAQNTPFDAKTAYFVSEPTEMYLKGKLTKREGGKA
TVETLTGKTLTVKEDEIFPMNPPKFDKIEDMAMMTHLSEPAVLYNLKERYAAWMIYTYSG
LFCVTVNPYKWLPVYDAVVVAGYRGKKRIEAPPHIFSISDNAYQFMLQDRENQSILITGE
SGAGKTVNTKRVIQYFATIAVAGGKKIEPVPGKMQGSLEDQIIAANPLLEAYGNAKTVRN
DNSSRFGKFIRIHFGSTGKLASADIETYLLEKSRVTFQLSAERSYHIFYQLMTGHKPELI
EALLITTNPYDYPMISQGEITVKSINDIEEFIATDTAIDILGFNSEEKASMYKLTGAVMH
HGNMKFKQKQREEQAEPDGTEVADKIAYLMGLNSADLLKALCYPRVKVGNEFVTKGQTVP
QVNNAVMALSKSVYEKMFLWMVVRINEMLDTKQPRSFFIGVLDIAGFEIFDFNSLEQLCI
NFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEEC
MFPKATDMTFKSKLYDQHIGKSAPFQKPKPAKGKAEAHFSLVHYAGTVDYNVLGWLDKNK
DPLNDSVVQLYQKSSVKLLALLYAAHAGAEAEGGAKKGKKKGGSFQTVSALFRENLGKLM
TNLRSTHPHFVRCLIPNESKTPGLMENHLVIHQLRCNGVLEGIRICRKGFPSRILYGDFK
QRYKVLNASVIPEGQFIDNKKASEKLLGSIDVDHTQYKFGHTKVFFKAGLLGLLEEMRDE
KLAILVTMTQALCRGYVMRKEFVKMMERREAIYSIQYNIRSFMNVKTWPWMKLYFKIKPL
LKSAETEKEMAQMKEDFEKTKEELAKALAKKKELEEKMVSLLQEKNDLQLQIQSEGENLA
DAEERCEGLIKAKIQLEAKVKETSERLEDEEEINAELTAKKRKLEDECSELKKDIDDLEL
TLAKVEKEKHATENKVKNLVEEMAAQDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNT
LTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAHETIMDLENDKQQAEEK
IKKKEFEISQFLSKIEDEQSLSAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRSDL
SRELEEISERLEEAGGATAVQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRKKQADS
VAELGEQIDNLQRVKQKLEKEKSEFKMEIDDLTSNMESVSKSKTNLEKLCRSLEDQLSEM
KTKNEEHVRQLNDIGVQKARLQTENGEISRQLEEKEALISQLTRSKQAYTQQTEELKRHI
EEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRALSKANSEVAQWRTKYETDA
IQRTEELEDAKKKLAQRLQDAEESIEAVNAKCASLEKTKQRLHGEVEDLMIDVERANALA
ANLDKKQRNFDKVLAEWKQKYEESQAELEGAQKEARSLSTEMFKLKNSYEEALDHLETLK
RENKNLQQEISDLTEQIGESGKTIHELEKGKKTAETEKSELQTSLEEAEATLEHEESKIL
RIQLELTQVKSEVDRKIAEKDEEIEQIKRNSQRVIESMQSTLDAEIRSRNDALRIKKKME
GDLNEMEVQLSHANRQAAEAQKQLRNVQGQLKVPPLHLDEAIRSQEDMKEQVAMVERRNN
LMVAEIEELRVALEQTERGRKVAEQELVDASERVGLLHSQNTSLINTKKKLEADLIQIQG
EVEDAVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEVTVKDLQHRLDE
AENLAMKGGKKQLQKLEARVRELEAEVDAEQRRCAEAIKGVRKYERRVKELTYQTEEDKK
NITRLQDLVDKLQLKVKSYKRQAEEAEEQANTHLSRYRKVQHEMEEAQERADIAESQVNK
LRAKSREIVKTKEAEE
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggacccagagatggagtgttttggcccggcggccgtttacctccggaagcca
gaaagagagagaattgaagctcaaaacactccctttgatgctaagacagcttactttgtg
agtgagcccactgaaatgtacctcaaggggaaacttaccaagagagagggcggcaaagcc
accgtggagactctcactggaaagactctcactgtaaaagaagatgaaattttccccatg
aaccctccaaagttcgataagatcgaggacatggccatgatgacccacctcagtgagcct
gctgtgttgtataacctcaaagagcgatatgcagcatggatgatctacacctactcaggg
ctgttctgcgtcactgtgaacccctacaagtggctcccagtgtatgatgcagtggttgtt
gcaggatacagaggaaaaaagaggattgaggctccaccccacatcttctccatctctgac
aatgcctatcagttcatgctccaagacagagaaaaccagtcaatcctgattactggagaa
tccggtgcaggaaagactgtcaacaccaaacgtgtcatccagtactttgcgacaattgca
gtggctggaggaaaaaaaatcgagccagttcctggaaagatgcaggggtcactggaagat
caaatcattgcagccaacccactgctagaggcttatggtaatgccaagactgtgaggaat
gacaactcttctcgttttggaaaatttatcagaattcactttgggtcaactggaaagctg
gcttcagctgatattgaaacttatctgctggagaagtctcgagtgacgttccagctgtcc
gctgagaggagctaccacatcttctatcagctcatgacaggccacaaacctgagctcata
gaggctctgctgatcaccacgaacccatatgactatcccatgatcagtcagggtgaaatc
actgtcaagagtatcaatgacattgaagaattcatcgctacagatactgctattgacatc
ctgggcttcaactcagaagagaaggccagcatgtacaagctgactggagctgtgatgcat
catggaaacatgaaattcaagcagaagcagcgagaagagcaggctgagcctgatggcact
gaggtggcagataaaatcgcctacctcatgggtctgaactctgctgatttgctcaaagct
ctatgctaccccagagtgaaggtcgggaacgagtttgtgaccaaaggtcaaactgtccct
caggtcaacaatgccgtcatggctctctctaagtctgtctatgagaaaatgttcttgtgg
atggtcgtcagaatcaatgagatgctggataccaagcagcccagaagctttttcatcggt
gtcctggatattgctgggtttgaaatctttgatttcaacagcttggagcagctgtgcatc
aacttcaccaatgaaaaactgcaacagtttttcaaccaccacatgtttgtcctggagcaa
gaagagtacaagaaagagggaattgaatgggagttcattgactttggcatggatttggct
gcctgcattgaacttattgagaagccaatgggcatcttctccatccttgaagaggagtgc
atgttccccaaggcgacagacatgaccttcaagagcaaactgtacgaccagcatattggg
aaaagtgcccccttccagaaaccaaagcctgccaaaggcaaagctgaggctcatttctct
ctggtgcactatgctggcactgttgactacaatgtccttggctggctggacaagaacaaa
gaccccctaaatgactcagtggttcagctctatcagaagtcttcagtcaaactgctggcc
ttgctgtacgcagcccatgccggagcagaagctgagggcggtgctaagaaaggcaagaaa
aagggtggctcttttcagactgtatctgctctgttcagggagaatttaggcaagctgatg
accaatttgaggagcactcatcctcattttgtacgctgtttgattccaaatgaatcaaag
actccaggtcttatggagaaccacctggtcattcaccagctgaggtgtaacggtgtgctg
gaaggtatcaggatctgcaggaaaggtttccccagcagaatcctctacggtgacttcaag
cagagatacaaagtattgaatgccagtgtgatccccgagggacagttcattgacaacaag
aaggcttcagagaaactcttgggctctattgatgttgaccacactcagtacaaatttgga
cacacaaaggtgttcttcaaagctggtctgctgggtctcctggaggaaatgcgagatgaa
aaacttgctatcctggtcacaatgactcaggctctctgcagaggatacgtcatgaggaaa
gagtttgtcaagatgatggagcgcagggaggcaatttactctattcagtacaacatccgc
tcattcatgaatgtcaaaacctggccatggatgaagctgtacttcaagattaagcctctg
ctgaagagtgcagagactgagaaagagatggcccaaatgaaagaggactttgaaaagacc
aaagaagagctagcaaaagctttggccaagaagaaagaactagaggagaagatggtttcg
ctgctgcaggagaagaatgacttgcagctgcaaattcagtcggagggtgaaaacctcgct
gatgctgaggaaaggtgtgaggggctcattaaagcaaaaatccagcttgaggccaaagtc
aaagagacatctgagaggctggaggatgaggaggaaatcaatgctgagctgactgcaaag
aagaggaagctggaggacgagtgctccgagttgaagaaagacatcgatgacttggagctc
actctggccaaagtggaaaaggagaaacatgccactgagaacaaggttaaaaacctggtt
gaggaaatggctgctcaagatgagaccattgccaagttgaccaaagagaagaaagccctc
caagaggcccatcagcagacccttgatgatctgcaggcagaggaagacaaagtcaacact
ctgacaaaggccaagaccaagctggagcagcaagtggatgatcttgaaggttccctggag
caagaaaagaagcttcgtatggatcttgagcgagctaaaagaaagcttgagggagatctc
aagttggctcatgaaactatcatggatctggagaatgacaagcagcaggctgaggagaaa
ataaagaagaaggaatttgaaataagccagtttctcagcaagattgaggatgagcaatca
cttagtgctcagcttcagaaaaagatcaaagagcttcaggctcgtattgaggagctggag
gaggagattgaggctgagagggctgctcgggccaaggtcgagaagcagaggtctgatctc
tccagggaacttgaggagatcagcgagaggctcgaggaagccggcggagcgactgctgtc
caaattgagatgaacaagaagcgtgaggccgagtttcagaagctgcgtcgtgatcttgaa
gagtccacgctgcagcacgaggccaccgctgcagctctgcgcaagaagcaggctgacagt
gtggcagagctgggagaacagatcgataacctccagagagtcaaacagaagctggagaaa
gagaaaagcgaattcaagatggagattgatgacctcacgagcaacatggagtctgtctca
aaatctaagaccaatctggagaaactgtgtcgtagccttgaggatcaactgagtgagatg
aagaccaaaaatgaagaacatgtgcgacaactgaatgatattggggttcaaaaggcaaga
ctgcaaacagagaatggtgaaatcagtcgccagctggaggagaaagaagccttgatctct
cagctgacaagaagcaagcaggcttatacccagcagactgaagagctcaagaggcatatt
gaagaggaagtgaaagccaagaacgccctggctcatgctgttcagtcagcccgtcatgac
tgcgacctgctcagagagcagtatgaggaggagcaggaggccaaggccgagctgcagcgc
gccctgtccaaggccaacagcgaggtggctcagtggagaaccaaatacgagactgatgcc
attcagcgcactgaggagctagaggatgctaagaagaagcttgcccagcgtcttcaggat
gcagaggaatccatcgaggctgtgaatgcgaaatgtgcctctctggaaaagacaaaacag
agactgcacggtgaagtggaggacctgatgatcgacgtggagagagccaacgctctggct
gctaaccttgacaagaagcaaagaaactttgacaaggtccttgcagagtggaagcagaag
tatgaggaaagccaggcagagctggagggagctcaaaaagaagcacgttctctcagcact
gagatgttcaagctgaaaaattcatatgaagaggctctggatcacctggagaccttgaag
agggagaacaagaacctgcaacaggagatctccgatttaactgaacaaattggtgagagt
ggaaaaaccattcatgaactggagaaagggaaaaagacggcagagacagagaagtccgaa
ctccagacttcacttgaagaagcagaggctaccctggagcacgaggaatccaagattctt
cgcattcagctggagctcacccaagtcaagagtgaagttgacaggaaaattgcagagaag
gacgaggagattgagcagatcaagaggaacagccagagagtgattgagtccatgcagagc
actctggatgctgagatcaggagcaggaacgatgccctgaggatcaagaagaagatggag
ggtgacctcaatgagatggaggttcagctgagccacgccaaccgccaggcagctgaagcc
cagaaacagctgagaaacgttcaaggacagcttaaggtacctccacttcatcttgatgaa
gccattagaagtcaggaagacatgaaggagcaggttgccatggtggagcgcaggaacaac
ctgatggtggccgagatcgaggaactgagagtcgcactggagcagacggagagaggccgc
aaagtggctgaacaggagctggtcgatgccagcgagcgtgtgggattactgcactctcag
aataccagcctcatcaacactaagaagaagctggaagctgatcttattcagatccaaggt
gaagtggaagatgctgttcaggaagcgagaaatgctgaggaaaaggccaagaaggccatc
actgatgctgccatgatggctgaagagctgaagaaggagcaggacaccagtgctcatttg
gagagaatgaagaagaacctggaggtgaccgtgaaggacctgcagcaccgccttgatgaa
gctgagaatctggccatgaagggtggcaagaagcagctccagaaattggaggccagggtt
cgcgaattggaggctgaggttgatgctgagcagaggcgttgtgcagaagctatcaaggga
gtgcgaaagtatgaaagaagagtaaaggaactcacctatcagactgaggaggacaagaag
aatatcactagacttcaggatctggtggacaagctgcaactcaaagtgaaatcttacaag
agacaagctgaggaggctgaggagcaggccaacactcacctgtccagatacaggaaagtt
cagcatgagatggaggaggctcaggagcgtgccgacatcgccgagtcccaggtcaacaag
ctgagggcaaagagtcgcgaaattgtcaagaccaaggaggcagaggagtga
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integrated database retrieval system
