Lates calcarifer (barramundi perch): 108889381
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Entry
108889381 CDS
T04895
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108889381
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108889381
04261 Adrenergic signaling in cardiomyocytes
108889381
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108889381
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108889381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
108889381
NCBI-ProteinID:
XP_018541322
UniProt:
A0AAJ7PXQ6
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Position
LG12:23762377..23798561
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AA seq
1096 aa
AA seq
DB search
MAIGKRSCSIVCLVSIQIILIFSASWPGAAGLTFPQQYTIMHWARRIEQEIDRVFQQITG
AQQLKGIYNEERRRFSLVKNQPRKIVEKVASDIEKLLAKKRKALDRLASEAERLQREHLW
QDGIKELDMAYYDSKAELDYYSMDGEGEVENPSHIKLEFVYDPNFKNNVNYSYTAVQIPT
DIYKGAPVILNELNWTQALEKVFMENSREDPSLLWQAFGSATGVTRYYPATPWKAPDKID
LYDVRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVARF
NEKAEAVVPCFKHLVQANVRNKKIFKDAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPRA
NCNKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYF
EIRSICAIRINTQEYLDVLGRPMVLAGSDAKQVQWTNVYQDALGLGMVVTGTLPVFNLTM
DGNSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIFAIDPNGYLLLHPNLQPKLVNLP
EPVTLDFLDAEVEDGNKEEIRRQMIDGRPGEMQVKTLIKSIDEQYIDEVYRGYTWTPING
TDYSLGLVLPPYNEYYIQADLSDVMLQLQYMQSLLPSSFESSGHVFLAPREYCKRLQLSD
NNTQFLQNFLSLMLDISPESDECDQGLIHNLILDSRIIGQLASRVWKNKDLNSYGFLAVF
ASTDGGITRVFPNIAAELWDEDPEPFNSNYYRRSLDNRGYMFRAPSKSSLDDPVGAENGT
VGILVSSAVEVNLGGKLLKPAVVGVKLDLEAWVDKFKILASNVSDSRQGSHKCGPSRSCE
MDCEVNTDDLLCYLIDDGGFLVMSNQRDHWRKIGLFFGDVDPYLMHALYNNSIFTRRQSF
HYQSACEPVSSSHTGAAPRGIFVPSIADILSLAWWTSTVAWSVVQQLLYGLAYNSWLHQD
RVLVEGFETKESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVAET
LPCSSCEIERLTQVRTEFQEENPCEVLSNARYRKGPTSCFDYSALENTSECGRGHSLQSS
IGVLLCIQLILPLFHL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcaaaaggtcttgcagcatcgtctgcttggtatctatccagattatcttg
attttcagcgcatcgtggcctggagcagcgggtctcacattcccccagcaatacacgata
atgcactgggccaggcgtatcgagcaggagattgacagagtctttcagcaaatcactgga
gctcagcagttgaaagggatatacaatgaagaaagaagacgatttagtctggtgaagaat
cagcctcgaaagatagtggagaaggtggcttcagacatagagaaactcctggctaagaag
cgcaaggccctcgataggttagccagtgaagcagagcggctccagcgagagcatctgtgg
caggatggaataaaggagttggacatggcttattatgactctaaggctgagctggattat
tattcgatggatggagaaggagaggtggaaaatccctcccatatcaagctggagtttgtt
tatgatccaaacttcaaaaacaacgtcaactattcctacacagctgttcagattcctaca
gatatttataaaggagctccagtcattctgaatgagttgaactggacgcaggcgctggag
aaagtcttcatggagaacagtcgggaggatccatcgctgctgtggcaagcgtttggcagt
gcgacaggagtcacccgctactatccagctacaccctggaaagcccctgataaaattgac
ctgtatgatgtcaggaggaggccctggtacatccagggcgcctcatcccctaaagacatg
gtcattcttgtggatgtgagtggcagtgtcagtggactcaccctaaaactgatcaaagcg
tcagtgatggaaatgctggacactctgtctgatgacgactatgtcaacgtggccaggttc
aacgagaaggccgaggctgtggttccctgcttcaaacatctagtccaggctaatgtgcgc
aacaaaaagatctttaaagacgcagtgcagcagatgcaggctaaaggcaccactgactac
aagtctggatttcattttgccttcaaccagctgttaaataagacaaatgtcccccgggct
aactgtaataaaataatcatgctgtttactgacggaggagaagacagagctcaggatgtc
ttcatgcagtacaactggcccaacaaaacggttcgagtgttcaccttttctgtgggtcaa
cacaactatgatgtcacacccttacagtggattgcatgtaccaataaaggttactatttt
gagatccgttccatctgtgctataaggattaacacccaggagtacctcgacgtgctgggg
cgccccatggttctggcaggcagcgatgccaagcaggttcagtggaccaatgtatatcag
gatgctttgggtcttggcatggtagtaactgggactcttcctgtatttaatctcaccatg
gatggaaactcacagaatcagctgatattaggtgtcatgggagttgacgtgcatcttgat
gagataaagcgactgacaccacggtacaatcttggagcaaatggatacatatttgcgatc
gacccaaatggatatcttctcctacatcctaatctccagccaaagcttgtgaacctccct
gaacctgtgacgctggacttcctagatgcagaggtggaggacggcaataaagaggagatc
cgccgacaaatgatcgatggaagaccgggcgaaatgcaggtcaaaactctcatcaagtcg
attgacgagcaatacatcgatgaggtgtacaggggttacacctggactcctatcaacggt
acagattacagtcttggtttggtactacccccctataatgagtactacatccaggcagac
ctgagtgatgtgatgctgcagctccaatatatgcagtcgctgctgcccagctcctttgaa
tcatcaggacatgtgtttctggctccaagggaatactgcaagcgcctgcagctttctgac
aacaacacccagttcttgcagaacttcctttcgctcatgctggatatttctccagaatct
gatgagtgtgaccaaggcctcatccacaacctgattttggattctaggattattgggcag
ctggcctctcgtgtatggaagaacaaggacctgaattcgtacggcttcctggctgtgttt
gcgtccacagatggaggaataacgcgggttttccccaacatagctgcagagttatgggat
gaagatcctgaaccctttaattcaaattactatagaaggagccttgacaacagaggttac
atgttcagagctccatcaaaatcatccttggacgaccctgtaggtgcagaaaatggcact
gttggaatcctggttagttcagctgtagaggttaatttaggaggcaaactgctcaaacct
gcagtggttggagtgaagctggacttggaggcatgggtggacaagtttaagatcctggcc
agcaacgtgtcagacagtcgacagggctcccacaagtgtggaccatcgagaagttgtgag
atggactgtgaagtgaacactgacgacctcctctgctatctcattgatgatggtgggttc
ctggttatgtccaatcagagagatcactggagaaagatcggtcttttctttggtgatgtg
gacccgtacctgatgcatgcactctacaacaactcaatcttcacccgccgtcagtctttt
cactaccagtctgcatgtgaaccggtcagcagcagccacaccggtgcagctccaaggggc
atctttgtgccatccatcgctgacattctgagcttggcctggtggacgtccacagtggca
tggtctgtggtccagcaactactgtatggactggcctacaacagctggctccaccaagat
cgtgtcctagttgaaggttttgagacaaaagaaagcagctgtgtgaccatccaaagccag
ttctactttacaaacaccaccaactcctacaatgtgttgcaggactgtggaaactgctca
cggctgttccacgcaaagcggatagaaaacacaaacctgctctttgttgttgctgagaca
cttccctgcagctcctgtgagatcgagagattgacccaggtcaggacagagtttcaagag
gagaatccatgtgaagtactgagcaacgcacgatatcgtaaaggcccgacttcctgcttt
gactacagtgccttagaaaacacgtcagagtgtggacggggtcattctctgcagtcctcc
ataggagtccttctctgtattcagcttattctgcctctctttcatctctga
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