Lates calcarifer (barramundi perch): 108889407
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Entry
108889407 CDS
T04895
Name
(RefSeq) liprin-alpha-4
KO
K26226
liprin-alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108889407
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108889407
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
108889407
NCBI-ProteinID:
XP_018541356
UniProt:
A0AAJ7V934
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Position
LG12:complement(19479378..19533821)
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AA seq
1182 aa
AA seq
DB search
MMCEVMPTISEGDSAGPPRGTGGVPNGSDQEANFEQLMVNMLDERDKLLESLRETQETLI
QSQTKLQGALHERDVLQRQINAALPQEFATLTKELNICREQLLEKEEEISELKAERNNTR
LLLEHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERL
RVALERVATLEGQLAATTQELNMVRQRKDGDSVERTDGSKPTWKRLPNGSIDAHDDGSRV
SELQELLDRTNKELAQTREHSATLNARVAELETELANARRELSRSEELSIKQQREQRERE
DMEERITTLEKRYLAAQRETTHIHDLNDKLENELATKDSLHRQSEEKVRQLQEMLEMAEQ
RLAQTMRKAETLPEVEAELAQRVAALSKAEERHGNVEERLRQLESQLEEKNQELGRARQR
EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNSLIQDLENCQKQLEEFHHT
RERLIGEIEKLRNEIDHLKRRSGVFGDGTHPRSHLGSSSDLRFSVVEGQDGHYSTTVIRR
AQKGRLSALRDDPNKDYPSLRGSVSHLLGSDIEAESDLDDDVSSALLSPSGQSDAQTLAL
MLQEQLDAINEEIRMIQVERESADLRSDEIESRVNSGSMDGLNVTLRPRALPTSATAQSL
ASSSSPPTSGHSTPKHHGRNTSHHLGIMTLPSDLRKHRRKVASPVEVDKATIKCETSPPS
SPRSLRLETNFAQFTGSLEDGRGKQKKGIKSSIGRLFGKKEKGRMDQTGVSRDGQPLPAL
SDFEMGIGDTMTLGKLGTQAERDRRMKKKHELLEDARKRGLPFAQWDGPTVVSWLELWVG
MPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPLT
SRTSSGNVWVTHEEMENLASSTKADNEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRS
YFMECLVDARMLDHLTKKDLRSHLKMVDSFHRASLQYGIMCLKRLNYDRKDLERRREDSQ
HDMKDVLVWTNEQVIHWVQSIGLREYSGNLLESGVHGALVSLDETFDYSSLALILQIPMQ
NTQARQVLEREFNNLLALGTDRRLEESGDDKTFRRSPSWRKRFRAREGGAGLGMMAGSME
TLPAGFRMPSMSMPPSVNLMPKKQLQPEVHSHYLYGHMLAAF
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgaccatcagcgagggagactcggccggtcctccgagaggc
accggcggcgtcccgaacggctcggaccaggaggccaacttcgagcagctgatggtcaac
atgctggacgagagggacaagctgctggagtccctcagggagactcaggagaccctcatt
cagtctcagactaagctgcagggggcgctgcacgagagggacgtgctccagcggcagatc
aacgccgcgctgcctcaggagtttgccaccctgacgaaggagctgaacatatgccgggag
cagctgctggagaaagaggaggaaatatctgagctgaaagctgaaaggaacaacaccagg
ctgctgttggagcacctggagtgtctggtgtctcgccacgaacgcagtttgaggatgaca
gtggtgaagagacaggcacccccgccatctggagtctctagcgaagtggaggtcctcaaa
gctctgaagtcgctgtttgaacaccacaaggctctggatgaaaaggtgcgtgagaggctt
cgggtggctctggagagggtggccaccctggagggacagctagcagctacaacacaagag
ttgaatatggtgagacaaaggaaggatggtgactcagtggagcgaacagatggatccaaa
cctacatggaagagactgcccaatggctccatagacgctcacgatgacggcagtcgggtg
tctgagcttcaggagctcctggatcggaccaataaggagctggcccagacccgcgagcac
tctgccactctaaatgcccgtgtggctgagcttgagacagagcttgcaaacgcacgccga
gaactgagccgcagcgaggagctgtcaatcaaacaacagagggaacagagagagagagag
gatatggaggagagaataacaacgttagagaaacgctacctggctgcccagcgggagacc
acacacatccacgacctcaatgacaaactggagaatgagctggccaccaaggactccctg
caccgacagagtgaagagaaggtgcgccagctgcaggagatgttggagatggcagagcag
agactggctcagaccatgaggaaggcagagactctgccagaggtggaagctgaactggca
cagagagtggcagcgctctccaaggctgaggagcgccatggcaacgtggaggagcgtctc
agacagctggaatcacaactggaggagaagaaccaagagctaggaagggctcgtcaaagg
gagaaaatgaatgaggagcacaacaagcgtttatctgacactgtggatcgtctgctcact
gagtccaatgaaagactgcagctccatttgaaagaacgcatggctgccctggaggacaag
aactcccttattcaggaccttgaaaactgccagaaacagcttgaagaatttcaccacacc
agggaacggttgattggagagatcgagaagctgagaaatgagatcgaccatttgaaacgc
cgcagtggggtgtttggagacggaactcaccctcggtctcacctgggtagctccagtgat
cttcgcttctcagtggtggagggccaagatggccactacagtacaactgtgatcaggcgg
gcacagaagggcaggctgtcagcgctacgagacgacccaaacaaggactacccatctctg
cgtggcagtgtcagccacctccttggcagcgacatcgaggccgagtcagacctggatgac
gacgttagctctgccctgctttcccccagcggccaatcagatgctcagactcttgctctc
atgctgcaagagcagcttgacgctatcaatgaagagataaggatgatccaggtagagaga
gagtcagcagacctgcgctctgatgagattgagtcccgtgtgaacagcgggagcatggac
ggactcaacgtgacgcttcgaccccgggccctgcccacctccgccaccgcccagtccctt
gcatcatcctcctccccacccaccagcggccactccacacctaaacaccacggacgcaac
accagccaccatctaggcatcatgactctgccaagcgacttgaggaaacaccgcaggaaa
gtagcatctccagtggaggtggacaaagctactatcaagtgtgagacatcaccgccctcc
tccccccgcagtttacgactggaaaccaattttgcccaattcacaggcagtttggaggat
ggtcgaggcaagcagaagaagggcatcaagtcatctattggccgattgtttgggaagaag
gagaagggtcgaatggaccagacaggagtcagcagggatggacagcccttaccggcctta
tcagactttgagatgggcatcggtgacactatgactctgggaaaactgggcactcaggct
gagagggaccgcaggatgaagaaaaaacatgagcttctagaagatgccaggaaaagaggt
ctgccatttgcccagtgggatggccctactgtcgtctcctggctagagctgtgggtgggt
atgccagcctggtatgtggcagcctgtcgtgccaacgtgaagagcggagccatcatgtca
gctctgtcagacacagagatccagagggaaattggcatcagcaaccctctgcacagactc
aagctgcgcttggccatccaggagatggtctccctcaccagcccctcagcaccactcaca
tcgagaacgtcctccggaaatgtgtgggtgactcatgaagagatggagaacctggcttct
tccaccaaagcggacaatgaggagggcagctgggcacagactctggcatatggagacatg
aatcatgagtggatagggaacgagtggctgcccagtcttggtctgcctcagtaccgctcc
tacttcatggagtgtctggtggacgcacgcatgctggaccacctgactaagaaggacctg
aggagccacctcaagatggtggacagtttccatagggctagtctgcagtatgggattatg
tgcttgaagagactcaattatgacaggaaagacctggagcgccggagagaggacagccaa
cacgacatgaaagatgtgttggtgtggaccaacgagcaggtgatccactgggtccagtcc
attggtctgagggagtacagtggcaacctgttggaaagtggtgttcatggggcgctcgtc
tctcttgatgagaccttcgactacagcagcctagcgctgatcctgcagatccctatgcag
aacacacaggcacggcaggttttggagagggagttcaacaacctgctagccttggggacg
gaccgtcgactagaggagagtggggatgacaagacttttcgacgctctccatcatggcgc
aagaggtttcgggcacgtgagggaggggcggggctggggatgatggcaggctccatggaa
acactgcctgcgggcttccgtatgccctccatgtccatgccaccctctgtgaatttgatg
cccaagaaacagctccaacctgaagtgcattctcattacctatacggacacatgcttgcg
gccttttga
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