Lates calcarifer (barramundi perch): 108889501
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Entry
108889501 CDS
T04895
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108889501
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
108889501
NCBI-ProteinID:
XP_018541491
UniProt:
A0AAJ7V969
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Position
LG6:17633674..17725280
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AA seq
1625 aa
AA seq
DB search
MSKVIQKKNHWITKVNECAVIRDACGELNVELRGGAENGEFPYIGQLREDAVVYQDGKLS
EGELLLEVEGLPVSGLPLYDILTVIKCCKDPLRLRTVRQGHKLNKDLKHYLSLRFQKSSP
DHELQKIIRANLYRHAVPCTTRPPREGEVPGVDYNFLSVEDFLELEESGTLLEIGTYEGN
YYGTPKPPRQPIIGTVILSDAGSQQSTPKRTKSYNDMQNARIVPADDDDDDQATEMNNSF
TGSLVRSLFPSPLLCTGNPNDQDESRGGILRPYPARDNAPSCGLNNAATSTADSGQQTLA
EPQVSPEDPLGPLPENWEMAYTENGELYFIDTAKAHHQDMAVYFQSFHNTKTTSWLDPRC
RDKASRPLEECDDDEEGIHTEDLESDLELPPGWERIDDPVYGVYYVDHINRKTQYENPVM
EARRRKILEQQQQPQPPEGERYIREWIEEHSSAAAPLANYAPNHLETYRDPQVPPTLPPG
PAGVKRGKPFFTRNPAELKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAA
VDGKMETGDVIVSVNDTIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYPLPFDPDDPNTS
LVTSVAILDKEPIIVNGQETFDSPSNQAGPVNGMREPRPHSPSAEVASNGSHGYSSDVVT
LASSIATQPELITIHMEKGDKGFGFTIADSLTGGGQRVKQIVDYPRCRGLKEGDILMEVN
KRNVQNMSHNQVVDLLSKCPRGSEVTMLVQRGVVPAKRSPKLVHQLERKDSQSSSQHSVC
SHRSTHTDSPSHPPSAMPSEAVAPTPAAPTQPLPGLPPQDPADGTLTLQKKPDPFKIWAQ
SRSMYESRLPDCQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRSG
DELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKTPGYGVSKGEGDVPPSPASSH
HSSTQAPSLTEGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVPASLQPYDVEI
QRGENEGFGFVIVSSVSRPDAGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILA
VNGCSITNKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLLTNAEKIATITTTHTPQQST
ELRNNSKSKGAPPPPPIQTQTTQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLAE
DGAAVRNGKMRVGDEILEINGESTKNMKHSRAIELIKNGGRRARLVLKRGDGSVPEYDGS
SDGHPPTPGAQNTPEVRTLPPNSRYHTSLESSYPPDLHKPSRQEEAARGQDRDKNRDRAG
SDQMDYQGRQFNPHHHHTWNNNHSQSTPRQQSPDNSNSGSSGNKKSRGRKVKKSESESGI
SKLLKTLRKDSSGKKAAAAEKLRGRELSSSSSTLDGRFRLQRRGSLDRSPTRKRASSPDR
RRAKSMDRRAERAHRDRTPEREYDDGGFLAVTPERKFYERRLLKDSQMVGRVREATTPER
SNNNGDSLSLSRGRTYDRATKNGNLLRDSSSERREERYRMNGTPERRYRVERDSSPDSTY
SRDELNYAAAPRLKDYYSMMKNNAAHNNAAYNNTGHNNNAVGRSPNQLPEPKRRLYKESP
KDLSI
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtcattcagaagaagaaccactggattaccaaagtgaacgagtgcgccgtt
atccgggacgcgtgcggggagctgaacgtggagctgcgcggaggagcggagaatggagag
tttccatacatcgggcaacttagagaggatgctgtggtataccaggatggtaaactctcc
gagggggagctgctcctggaggtcgaggggctgcctgtgtctggattaccactttatgac
attttaactgtgattaagtgctgcaaagatcccctcaggttgagaactgtgcgtcaaggt
cacaagctcaacaaggacctgaagcactacctgagcttgaggtttcaaaagtcttcacca
gaccatgagctgcagaagatcatccgagccaatctgtatcgccatgctgtgccttgtaca
acccgcccccctcgagaaggagaggtcccaggggtggactacaacttcctgtctgtggag
gacttcctagaacttgaggagagtggcacactactggaaataggaacgtatgaaggtaac
tattatgggacccccaagccgccaaggcagcccatcattgggacagtgattctcagtgat
gcaggctcccagcagtccaccccaaagcgcaccaagtcctacaatgacatgcaaaacgcc
cgaatagtgcctgctgacgacgacgatgacgaccaggccacggaaatgaacaacagtttt
acaggatccttagtgcgtagtctcttcccctctcctttgttgtgcacaggtaaccctaac
gaccaggacgagagccgcggcggcatcctccggccgtaccccgcacgtgacaatgctcca
tcctgtggtctgaacaatgcagccacctccaccgcagacagcgggcagcagaccctcgct
gaaccgcaggtctctccagaagacccgctgggaccgcttcctgaaaactgggagatggcc
tacaccgagaacggagaactttacttcatagacacggcaaaggcacaccaccaggacatg
gctgtgtattttcagagcttccacaacacaaagaccacatcatggctggatcctcggtgt
agagacaaagcctccaggcctctggaagagtgtgacgatgatgaagaagggatacatacg
gaggacctggagagtgatttagagctgcctccaggatgggaaagaatagatgacccagtg
tacggggtgtattatgtagatcacataaacagaaagacacagtatgagaacccagtgatg
gaggcgcggcgtcggaaaatcctggagcagcagcagcagccgcagcctccagaaggtgag
cggtatattcgagagtggatagaggagcactcctcagcagcggctcctttggcaaactac
gctccaaaccacctggagacctacagggacccacaggtcccaccaactctacctcccggc
cctgcaggagtcaaacgagggaagcctttcttcacaagaaacccagcagagctgaaagga
accttcatcaacacaaagctgaagaagagtcgtcgtggcttcggcttcactgtggttgga
ggtgacgagccagatgagtttctacagatcaaaagtctggtgctggatggtcctgcagct
gtagatggcaagatggagacaggtgatgtgatagtcagtgtgaatgacaccattgtgctg
ggctacacccacgcccaggtggtgaagatcttccaatccatccccatcggctccatggtg
gacctggccttatgccgtggctatccgctgccctttgaccccgacgaccccaacaccagc
ctggtgacctcagtggcgatcttggacaaggagcccatcatcgtcaatggacaggagacg
ttcgactctccctccaaccaggccggacccgtcaatggcatgagggagccgcggccgcac
agcccctcagccgaggtggcgtctaatggttcgcatggctactccagcgatgtggtcacc
ctggcctcgtccatagccacccagcccgagttgatcaccatccacatggagaagggagac
aaagggttcggcttcaccatcgccgacagcctgacaggaggagggcagagggtcaagcag
atagtggactatccacgctgccgtggcctaaaggagggggacattctgatggaggtcaac
aagaggaatgtccaaaatatgagccacaaccaggtggtagacctgctgagcaaatgtccc
agaggcagcgaggtcaccatgctggtgcaaagaggagtggtgccagccaagaggagtcca
aagctggtgcaccagttagagaggaaagacagccagagcagctcccagcacagcgtgtgc
agccatcgcagcacccacaccgattctcccagccacccaccctctgccatgcccagtgag
gctgtggctcccactcctgctgcccccacccagcctctgccaggcctgccccctcaggac
cccgcagatggcaccctcaccctccagaagaagccagacccctttaagatctgggctcag
tccaggagcatgtacgagagccgactgccagattgccaggagcaggacattttcctttgg
cggaaagatacgggcttcggctttcgcatcctaggaggaaatgagcctggggagcctatc
tacatagggcacatagtgaagtacggggcagcagatgaagatggccgcctgcggtcgggc
gatgaactcatctgtgtggatggcacggcagtggtgggcaagtctcaccagctggtggtg
cagctgatgcagcaggccgccaaacagggccatgtcaacctcactgtcagacgcaagacc
cccggatacggagtgtcaaaaggagaaggtgatgttcctccatcgccagcctcctcccac
cacagcagcacccaggcacctagtctgacagaaggcaagcggaccccccaggggagtcag
aactcactcaacaccgtcagctctggcagcggatccaccagtggcattggcagcggcggc
ggaggcggcagcgggagtgctgtggtgcccgcctccctgcagccatacgacgtggagatc
cagcgtggagagaacgagggcttcggtttcgtaatcgtgtcatctgtttccaggcctgat
gccggcaccacctttgctggaaatgcttgtgtggccatgccccacaaaataggacgtatc
atcgagggcagcccagcggaccgctgcgggaagctgaaagtcggggacagaatattggct
gtcaacggctgctccatcacaaacaagtcacactctgacatcgtcaacctgatcaaggag
gccgggaacacagtctcgctcaggataatcccgggtgatgaatcttccaatgcttctcta
ctgaccaatgctgagaagatagctaccatcactaccacacacacacctcaacagtccaca
gagttacggaataactcaaagtcaaaaggggctcctcctcctccgcccatacaaactcag
acaacacaggatgctgagttctactctgtggacctcgagcgggacagtaaaggttttggc
tttagtctgagaggaggacgggagtataacatggacctgtacgttttgagactagcagag
gatggtgctgctgtcagaaatggcaagatgagggtgggagatgagatcctggagataaac
ggtgagagcacaaagaacatgaagcattcacgtgccattgaactgatcaagaatggtggt
aggagggcgcgccttgtcctcaaacgtggagatggatctgtacctgaatatgacggcagc
agtgacgggcaccctcccacacccggggcacaaaacactccggaagtgagaacgctgcca
cccaacagccgatatcacacctcattggagtccagttatccaccagaccttcacaaacca
tcacgccaggaggaggctgcgcgtggccaagacagggacaagaacagggacagggctggg
tcagatcagatggactaccaaggccggcaatttaacccccaccatcatcacacctggaat
aacaatcacagtcaaagtacccccagacagcagtctccagacaacagtaacagcggtagc
agtggcaacaagaagagccgaggccgcaaagtcaagaagtctgagtcggagagcggcatc
tctaaactcctaaagactctgaggaaagacagctcggggaagaaggctgcagctgctgag
aaactgagggggcgagagctctcgagcagcagttctactttggacgggaggtttcgtctg
cagcgccgcggctcccttgaccgttcaccaacccgaaagcgcgcctcatctcctgatcgc
cggcgggccaagtcgatggaccgcagggcagagcgagcacatcgggaccgcacacctgag
agggagtacgatgacggagggttcctcgcagtcactcctgaacgcaagttctatgagcgg
aggctcctcaaggactcgcagatggttgggcgagttagggaggccacaacccccgagcgc
tccaacaacaacggggattcgttgtctctttccaggggccgtacatatgatagagccacg
aagaacggcaacctcctgagagactcatcctcagagaggagggaggagagatatcggatg
aatgggacaccggagagacgataccgagtggagcgggactcttcccctgacagcacctac
agccgggacgagctgaactatgcagcagcacccagattgaaggactactacagcatgatg
aagaacaacgctgcacacaacaatgctgcctacaacaacacaggccataacaataacgca
gttggccgcagcccaaaccagctccctgagcccaagagaaggctgtacaaagaaagcccc
aaagacctcagcatctag
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