Lates calcarifer (barramundi perch): 108889504
Help
Entry
108889504 CDS
T04895
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108889504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108889504
Enzymes [BR:
lcf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
108889504
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108889504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
108889504
NCBI-ProteinID:
XP_018541508
UniProt:
A0A4W6ELN0
LinkDB
All DBs
Position
LG6:17826257..17829685
Genome browser
AA seq
411 aa
AA seq
DB search
MAKHAVLSSGAKMWRSLVCLKSELRLDLTLACGQSFRWRETAEGHWTGVMGGRVWTLTQT
DDTLWYHVYKNQDGQKMGSDRKRRAGVSLQEENNSEKRFKGALKKEEEEMLAVTSVQDTE
EEEEKLRDYLQLNVKLEELYREWGAADPHFRKIADIFTGVRMLRQDPTECLFSFICTSNN
HISRIQGMVERLCQALGAPLCQLDETSYYDFPSLTALADSSVEACLRDLGFGYRARFLQQ
SAKQVLDTHGLQWLEGLRSIPYLQARDALRALPGVGTKVADCVCLMSLDKAEAVPVDTHV
WQIAKRDYKYAAGNGQKSITDKLHRDIGDFFRKLWGPYAGWAHSVLFCADLKKFQKLKET
PHLMQPKKEEKDEEEMRVACKKAKIRTEENGTVKHTKTKKTKTSVKNEKAV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatgcggtgctgtcatcgggggcaaaaatgtggagatctctggtctgttta
aagtcagagctgcgcctggacctcactcttgcctgtggacagtctttccgctggagagaa
accgcagagggccactggaccggagtgatgggaggacgagtgtggactctaacccagaca
gatgacaccctgtggtaccacgtttataaaaaccaagacgggcagaagatgggaagtgac
aggaagaggagagctggagtttctctccaggaggaaaacaactcagagaagagattcaaa
ggggctttgaagaaggaagaggaggagatgttggctgtgacttcagtgcaggacactgag
gaggaagaagagaagctgagagattacctccagctgaatgtgaagctggaggagttgtac
agagaatggggagctgcagacccccacttcaggaaaattgcagacatcttcacaggtgtg
cgaatgctgcgtcaggacccgactgaatgcctgttttctttcatttgcacctccaacaac
cacatctctcgtatccagggcatggtggagagactgtgtcaggctctgggtgccccactg
tgccaactggacgaaacctcttactatgactttccttccctgactgcacttgcagacagc
agcgtagaggcatgtctcagggatctcggttttggatacagggctcggtttctgcagcag
agcgcaaagcaagttctggacacccatggtctccagtggcttgaaggtctacgcagcatt
ccatatctgcaggcccgtgatgctctgcgtgcgcttcctggtgtgggcaccaaggtggca
gactgtgtatgtctgatgtccctggataaggcagaggccgtgcccgtcgacacacatgtg
tggcagatcgctaaacgcgactacaaatatgctgctgggaacggacagaagagcatcaca
gataaacttcacagagatattggtgattttttcagaaaactgtggggtccttatgctggt
tgggcacattcggtgttgttctgtgctgatctcaagaagttccaaaagttaaaagaaacg
ccacatctgatgcagccgaagaaagaggaaaaggatgaagaagaaatgagggtagcgtgc
aagaaagcaaaaatcaggacggaggaaaatggaactgtgaagcacacgaaaaccaagaaa
acaaagacgtctgtcaagaatgagaaggcggtatga
DBGET
integrated database retrieval system
