Lates calcarifer (barramundi perch): 108889540
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Entry
108889540 CDS
T04895
Name
(RefSeq) eukaryotic translation initiation factor 2D
KO
K15027
translation initiation factor 2D
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lcf03012
]
108889540
Translation factors [BR:
lcf03012
]
Eukaryotic type
Initiation factors
eIF-2D
108889540
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pre-PUA
SUI1
PUA
SWIB
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
108889540
NCBI-ProteinID:
XP_018541576
UniProt:
A0A4W6EPG7
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Position
LG6:complement(17568678..17577149)
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AA seq
594 aa
AA seq
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MFAKPFRVKSNTVIKGSDRRKLKADISAAFPSLSADELSELVPNKEELNVVKIYAHKGDA
VTLYVLHKNPLFFELEKRLYPTVYVLWRYPALLPTFRTWPPVLQKMIGGADLMLPGVVVP
SSGLPDVKQGDCCAVTVVSNRAPVAVGTAAVSSAEMHSSGMKGRGVCVLHTYMDNLWAFG
DKSGPPSLPDAESEGQGVYGDGCEADEEEEEKEEVEKCVEEEWGSGKTVTDQVCSGTEEL
SLAEQEEEKGEKGNEEEEETQDDLKTPQEIMDTLLVQCFLHALKSKVKKSELPLLTSTFL
RNHMFSCCPSGKQLDIKKSSYKKLSKFLHTMQQQHNLVRVKELTKGVESIVEVDWKNPEL
RSFSVPEEMDSEAAPVQDEGEGQTPYHPPEITTLYSVSARLEPLFLDANKRKGTILQPAE
VRSIVTEYVKKNELVDENNKNYVTINPTLCDCLLEKSEYQEIESLKWDDLFSRTLGRMQE
CYQAVFPGQAPIIKKGHIEPIDISVASRGSNKKVTLIKNLEVYHLDPAVVATALQHRVQA
SSVLQPIPGAKDKVMVQIQGNQIHQVGSLLLDHYQIPRKYIQGLDKALKGGKKK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaaccgttccgtgttaaatccaacaccgtgatcaaaggatcagacaggaga
aagctcaaagctgacatatctgcagcctttccctcactctctgctgatgagctgtcagaa
ctggtccccaacaaggaagaattaaatgtagtgaaaatttatgcacataagggagatgct
gtgacactttatgttctgcacaaaaatccactgttctttgaactggagaaacgactctat
cctacagtgtatgtgctttggcgttatcctgctctcttgccaacattcaggacatggccc
ccagtgcttcagaagatgattggaggggcagatctcatgctgccaggcgtagtggtgcct
tcaagtggtctcccagatgtgaaacagggtgactgctgtgctgttacagtagtgagcaat
agagctcctgttgcagtcggcacagctgcagtgtccagtgcagagatgcacagttcgggc
atgaaaggaagaggagtgtgtgttctccacacatacatggataatctctgggcttttgga
gacaagtcaggtcctccatctttaccagatgcagaaagtgaaggccaaggggtgtacgga
gatggatgtgaggctgatgaggaggaggaagaaaaggaggaggttgagaagtgtgtggag
gaggagtggggttccggcaaaacggtcacagaccaagtctgttctggtactgaggagctg
agcctggctgagcaggaggaagagaagggtgaaaagggcaatgaggaggaggaggagact
caggatgaccttaaaacgccacaagagataatggacaccctactagtacagtgttttctg
cacgctcttaagagcaaggtgaagaagtcagagctccctctgctgaccagtacatttcta
cgcaaccacatgttctcctgctgcccaagtggaaagcaacttgatatcaagaaatccagc
tataaaaagctgtccaagtttcttcacaccatgcaacagcagcacaaccttgtgagagtg
aaagaactgaccaagggtgtggagagcattgtggaggtggactggaaaaatccagaactg
cgctccttcagtgttccagaggagatggacagtgaggcggctccggtgcaggatgaaggg
gaaggacaaactccctaccatcctcctgagatcacaactctgtactctgtgtctgctcgg
ctggagcctctctttttggatgcaaacaagaggaaaggaacaatcctgcaaccagctgaa
gtgagaagtattgtcacagagtatgtaaagaagaatgaactggtggatgaaaataataaa
aattacgtgaccataaaccccactctgtgtgactgcttgctggagaaatcagagtaccag
gagattgagtctctcaagtgggatgacctctttagcaggacgttgggaagaatgcaggag
tgctatcaagctgtgttccctggacaagcgcccataataaagaagggccacattgagccc
atagacatctctgtggcttctcgaggctccaataagaaggtgactctaataaagaacctg
gaagtgtaccatttggatccagcagtcgtggccactgctttgcagcacagagttcaggcc
agctctgtattacagcccatccctggggctaaggataaagtcatggtccagatccaaggc
aaccagattcaccaagttggcagtttgctgttagatcactatcaaatcccccgcaagtac
atccaaggactagacaaagctctaaaaggtggcaagaagaagtag
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