Lates calcarifer (barramundi perch): 108889600
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Entry
108889600 CDS
T04895
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108889600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108889600
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108889600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
108889600
NCBI-ProteinID:
XP_018541666
UniProt:
A0AAJ7PY68
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All DBs
Position
LG15:12566977..12579464
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AA seq
936 aa
AA seq
DB search
MRRSAAPSQLSGNAMKKPRFVPPGASTSGVVAESKPLAPKPGLGNALKKVQRSLAAPPPS
KTGCDVQVKAAEDAPALSRALARVLNATESKENEAEVECPDAGIRDYAEDNRSAGGNGSL
QLTPRSPQTPQPPVGSDSARNQDGVHYYSVVWCKASKKKHKRWEGDAVLVTRGRTATLKD
MEGKDIGKGSGYKVSELASLSEGQTLMIGGKEVEVMGVISPEDFAKGRCFQEVQIEKEEP
HIKSAPPPPRRFASKPFCPPTQVGRAEHPLTKPEEEQTCRPRHDPLAPGALVMPRPSANH
QWCNNKSGLPVVDVVLDPYLTTHLRPHQRDGLLFLYECVMGMRAVGRYGAILADEMGLGK
TLQSVALSWTLLKQGPYGGKPVAKRVLVVTPGSLVQNWGAEFNKWLGRERISVFTVDQDH
RIEQFVLSPLHSVLVISYEMLLRCLEQVQKVEFGLIICDEGHRLKNSSIKTSSALSSLSC
TRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILRSRQPCCTEEERVLG
EERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCEPSPLQLELYRHLLCHRVFRACL
QGSTQTHTHLACITALKKLCNHPGLLHSTVKEKTDQGSLESSLYDGLVDLFPESYSSGGL
SIADSGKLLVLSDLLTAIRQLSPSDRVVVVSNYTQTLDLLQDLCAHMSYTFCRLDGHTPT
SQRQRLVDSFNSPYSQNFVFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWR
DGQRKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSTNELRDLFSLT
DTPSLTHDLLNCSCSMDGSVQALVGDEDPVSDRPCQLGRQGDRGGGAGAQKHLSMSELMQ
WRHFSGDTHTFSDPYLDHARNHITFAFQTTISHTAQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctcagcagctcccagccagctctcgggtaatgctatgaaaaagccgcgtttc
gtgcctcctggagcatctacttcaggtgttgtggctgagtccaagcctctggcccctaaa
cctggattaggcaatgcactgaaaaaggtccagagaagtctagcagcacctcctccaagt
aagacaggctgtgatgtccaggtcaaagctgcagaggatgctccagccttgtccagggct
ctggctcgtgttctcaacgcgactgaaagtaaagaaaatgaggctgaagtggaatgtcct
gatgctggcatcagggattatgcggaagacaacagatcagcaggaggtaacggctctctt
cagttgacacccaggtctcctcaaaccccacagcctcctgtgggctcagactcggcccgc
aatcaggatggagtgcactactatagtgtggtgtggtgtaaggccagtaagaagaaacac
aagcgctgggagggcgatgcagtcctggtgacaagaggacgcacagccacacttaaagac
atggagggaaaagacatcggcaaaggtagtggctacaaggtgtcagagttggcctctctt
tctgagggacagaccctgatgattggtgggaaggaggtagaggtgatgggggtcatttca
cctgaggacttcgccaagggacgctgtttccaagaggtccaaatagagaaagaggagccg
cacataaaatcagctccaccccctcctcgtcgctttgcatccaaacctttctgccccccg
acccaggtaggaagagcagagcatccattaactaaaccagaggaggaacaaacctgtaga
cctcgccatgaccccctagctccaggcgcactggtgatgcctcgtccctccgccaaccac
cagtggtgcaataacaagtcagggcttcctgtagttgatgttgtgcttgacccatacctg
accactcacctgagaccccaccagagagacggcctgctcttcctctatgagtgtgtcatg
ggcatgagagctgtgggtcgctacggcgctatcctggctgatgagatgggtctggggaag
accctccagagtgtggcgctttcgtggacgttgcttaagcagggaccgtacggcgggaaa
ccagtcgccaagcgtgtcctcgtggttactcctggcagcctggtgcagaactggggagca
gagtttaacaagtggctgggccgcgagaggatcagtgttttcactgtagatcaggaccac
aggatagagcagtttgtgctatctcctctgcacagcgttctggtcatcagctatgagatg
ctgctgcgctgcctggagcaggtacaaaaagtggaatttggtctcataatttgtgatgag
ggtcacagattaaagaacagcagcatcaaaacgtcctctgctctcagtagcctcagctgt
actcgcagggtcatacttacaggcactccggtacagaatgacctgcaggagttctatgct
attatagagtttgttaacccagggattcttgggtcatcaactgcttacaggaaagtgtac
gaggagccaattctacgttccagacaaccctgctgcacagaggaggagagagttttggga
gaagagcgagctgctgagctttctcgcctgactggcatgttcatcctgaggcggacgcag
gagatcatcaaccgctacctgcctcctcgtctcgactggaccttgttctgcgagccgtcc
cctctgcagctagagctttacaggcatctcctgtgccatcgagtcttcagggcctgcctt
cagggctccacgcaaactcacacacacctggcctgcatcactgcactgaagaagctctgt
aaccaccctggtctgctccactccactgtcaaggagaaaacagaccagggatcactggaa
agttcattatacgatggtctggtagatctcttcccagaatcctactcttcaggtggactc
agcattgctgattctggaaaactccttgttctgtctgacctgctgactgccatcagacag
ctcagcccttcagacagggtggtcgtagtgtccaactacactcagacacttgacttgctc
caggacttgtgtgcacacatgagctacactttctgccgactagatggacacacacccacc
agccagagacagcggctggttgacagttttaacagcccctattcccagaactttgtgttt
ctgctgagctctaaagcaggaggggtgggacttaatttgatcggtgcttcccacctggtg
ctgtatgatattgactggaaccctgccaatgacattcaggccatggctcgagtatggagg
gacggacagaggaagacagtgcacatctaccgtctcctcactgcaggtactattgaggag
cgtatattccagagacaggtgtccaaacaggggctttctgggactgtggttgacctgggc
aaaggtgccgagcacaccagtttctccaccaatgaactgcgagatcttttcagcctgacg
gacactccctcgctaactcacgacctgttgaactgcagctgcagcatggatggatcagtc
caggcccttgtaggggatgaggacccggtctctgataggccgtgccagcttggtcgtcaa
ggtgaccgcggaggtggggcaggggcgcagaagcatctcagcatgtcagagctgatgcag
tggagacatttctctggtgacacacacaccttctcagacccctaccttgatcacgcacga
aaccacatcacctttgccttccagaccaccatctctcacacagctcagtaa
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