Lates calcarifer (barramundi perch): 108889613
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Entry
108889613 CDS
T04895
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108889613
Cell adhesion molecules [BR:
lcf04515
]
Cadherins
Major cadherins
108889613
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
Cadherin_CELSR2_9th
RibLong
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
108889613
NCBI-ProteinID:
XP_018541688
UniProt:
A0A4W6CI17
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Position
LG15:12589928..12604057
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AA seq
899 aa
AA seq
DB search
MGLLRSLSSLRSDSLDLSAKTVIMTPMVHLLLLPLLFSIAGGKDLEEKKGPFENTMLDVP
EGTPVPYPMHQFQVTHPGVNNFRLSGEGREKIKISRDGWLYLEKSLDWSQEEHYTIMVEA
LADDEVVEGPISVIINVLDVNNNAPYFNQTDYTAVVRENKAAGVPFTRVFALDQDDPKTP
NARLSYSLVSQIPNKQHTLLFQINPNTGEISTTEEGERMLKAREGIKYGRGEDQSIETLK
TKFDEYCPGNNPQSIPYEANPFFTCVERAEMRRRNADPLEDPDYTLIVRVQDLGGESENA
LSGNARVHIVVQQNLWFSPGPIIVKENLLGNYPMVIAKVQSNDPDAIYSLVQKERELKFP
FQITEDGEILLTEPLDREDKNMYILVVFAKDNNDQELEEPLEIQVIVGDVNDNAPMCEKE
ESVFEVQENEPVGSLVGKLLAHDIDDAETLNAQLTYTILSQNPPTTPIVFSIDAASGEIR
ALRSLQRKEEQAYHLSVKVSDPAFSTDCKVIIKVIDINNELPLFEKTDYGNHTLAEDTTV
GHTLLTITATDADDPDSGSSLIEFHISSGNDGNVFAVETDGKGVGHLVIAKPLDYESSKD
YKLQIDARNPEPLMKNLEYGRESTAFVSVSVTDVDEAPEFSLDILDVTVPENTTKGSVLL
TVEAKDPEGKEIGFKLDGDTRGWLEIDAATGEIKTKDNLDRETLETFEVTVTAFEKENPE
KSSERVVSVRLLDVNDNIPRLIEKQAFICVKKPEPVIIKAQDGDSEPFSKPFTFTFAHGK
KTPNWDLKPIDDTAAILTLKKIPTEDKTFTLPINIKDKAGMGVTQSFEVRVCNCTELGYC
YVAPADRSSRLGMGPTIGILAGTLGFCVVVFIVVIKRVNKGGKRKTLTEEEERERNVMM
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggggttgctcagatcactctcaagtcttaggagtgactcacttgatctctccgctaag
actgtgatcatgacacccatggtgcatctgttgttgctcccactcctgttcagcattgct
ggcgggaaggatctggaggaaaagaagggcccatttgagaacacaatgctggatgtgcca
gaggggacaccagtgccgtatcccatgcatcagtttcaggtgacccacccaggtgtgaat
aatttcaggctgagtggagaggggagggaaaaaattaagatttcaagggatgggtggctc
tacctggagaagtctctggactggtctcaagaagagcattacacgatcatggtggaggcg
ttggcagatgatgaagtcgttgaaggtccaatttctgtgatcataaatgtgttggatgtc
aataacaacgctccgtacttcaaccagactgactacacagctgtggttagagaaaacaaa
gcagcaggtgtcccatttacccgcgtgtttgcgttggaccaggacgaccccaagactcct
aacgctcgtctgagctacagcctggtcagccagatccccaacaaacagcacaccctcctg
ttccagatcaaccccaacaccggagagatctccaccacggaagaaggagaacggatgcta
aaggccagagagggcatcaagtatggcaggggtgaagatcagagcattgaaacactgaag
acaaagtttgatgagtactgtccggggaacaatccccaatctatcccctatgaagcaaac
cccttcttcacctgtgtggagagagcagagatgaggaggaggaatgcggaccccttggag
gacccagactacaccctgatcgtgcgtgtgcaggacctgggaggagagtcagagaacgca
ctgagtggaaacgccagagttcacattgttgtgcagcaaaacctgtggttcagccctgga
ccaataattgttaaagagaacttactgggaaattatcccatggtcattgcaaaggtccag
tctaatgatcctgatgccatctacagtttggtgcagaaagaacgagagctgaaattcccc
ttccagataaccgaagatggagagatactcctgacagagccgctggacagagaagacaag
aacatgtacatcctggtggtgttcgcaaaggataacaacgaccaagagttggaggagcct
ttggagattcaagtcattgtgggcgatgtgaatgacaatgcaccaatgtgtgagaaagag
gagagtgtatttgaagtgcaggagaatgagcccgtaggcagtctggtaggaaagctgttg
gcccatgatattgatgatgccgagacgctgaatgctcagctgacttacaccatcctgtcc
caaaatccacccaccacacccatcgtcttctccatcgacgctgcttctggagaaattcgg
gcgttgcgctcgctgcagcgaaaagaagagcaggcctatcacctcagtgtcaaagtcagc
gacccagctttcagcaccgattgtaaagtcatcatcaaggtcattgacatcaacaacgag
ctgcctctgtttgagaagactgattatggcaaccacactctggcagaggacaccactgtt
ggacacacactgctgaccatcacagcaacagatgctgatgacccagacagcggcagctcc
ctcatcgagttccacatctcttctggcaacgacggtaacgtttttgccgtggaaacagat
ggaaaaggcgttggccatctggtcatagctaagcctttggactacgagtcttctaaagac
tacaaactccagattgatgctcgtaacccagagccgctgatgaaaaacctggagtacggc
agggaatccacagccttcgtctctgtgtctgtcaccgatgtggacgaggccccggagttt
agtctggacatcctggatgtgactgtgcctgaaaacaccaccaagggatcagtgctgctc
actgtggaggcaaaggacccagagggcaaagagatcggtttcaagttggacggtgacact
cgtggctggctggagatcgatgctgccacaggagaaatcaagaccaaagacaatctggac
agagagaccctggagactttcgaagtcactgtcactgcatttgagaaggagaaccctgag
aagtcttctgagcgtgtcgtgtctgtgaggctgctggacgtgaacgacaacatccccaga
ctgatcgagaagcaggccttcatctgcgtaaagaagcctgaacctgtcatcatcaaggcc
caagatggagacagcgagcctttctccaagcccttcacctttacctttgcccacggcaag
aaaacacccaactgggacctgaagccaatcgacgatacagcagctatactgaccctgaag
aaaataccaactgaagacaaaactttcacgcttcccattaacattaaagacaaggcaggc
atgggagtcacacagtcatttgaggtgagagtatgtaactgcacagagctgggctactgc
tatgtcgcaccggccgatcgttcctccagattaggaatgggacccaccatcgggatcctg
gctggcactctgggattctgcgttgttgtcttcattgtagtgatcaaacgtgtaaataaa
gggggcaagaggaaaaccctgactgaggaggaagagagagagaggaacgtcatgatgtag
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