KEGG   Lates calcarifer (barramundi perch): 108889613
Entry
108889613         CDS       T04895                                 
Name
(RefSeq) cadherin-17
  KO
K06811  cadherin 17, LI cadherin
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcf04515]
    108889613
Cell adhesion molecules [BR:lcf04515]
 Cadherins
  Major cadherins
   108889613
SSDB
Motif
Pfam: Cadherin RET_CLD1 Cadherin_CELSR2_9th RibLong Fibulin_C
Other DBs
NCBI-GeneID: 108889613
NCBI-ProteinID: XP_018541688
UniProt: A0A4W6CI17
LinkDB
Position
LG15:12589928..12604057
AA seq 899 aa
MGLLRSLSSLRSDSLDLSAKTVIMTPMVHLLLLPLLFSIAGGKDLEEKKGPFENTMLDVP
EGTPVPYPMHQFQVTHPGVNNFRLSGEGREKIKISRDGWLYLEKSLDWSQEEHYTIMVEA
LADDEVVEGPISVIINVLDVNNNAPYFNQTDYTAVVRENKAAGVPFTRVFALDQDDPKTP
NARLSYSLVSQIPNKQHTLLFQINPNTGEISTTEEGERMLKAREGIKYGRGEDQSIETLK
TKFDEYCPGNNPQSIPYEANPFFTCVERAEMRRRNADPLEDPDYTLIVRVQDLGGESENA
LSGNARVHIVVQQNLWFSPGPIIVKENLLGNYPMVIAKVQSNDPDAIYSLVQKERELKFP
FQITEDGEILLTEPLDREDKNMYILVVFAKDNNDQELEEPLEIQVIVGDVNDNAPMCEKE
ESVFEVQENEPVGSLVGKLLAHDIDDAETLNAQLTYTILSQNPPTTPIVFSIDAASGEIR
ALRSLQRKEEQAYHLSVKVSDPAFSTDCKVIIKVIDINNELPLFEKTDYGNHTLAEDTTV
GHTLLTITATDADDPDSGSSLIEFHISSGNDGNVFAVETDGKGVGHLVIAKPLDYESSKD
YKLQIDARNPEPLMKNLEYGRESTAFVSVSVTDVDEAPEFSLDILDVTVPENTTKGSVLL
TVEAKDPEGKEIGFKLDGDTRGWLEIDAATGEIKTKDNLDRETLETFEVTVTAFEKENPE
KSSERVVSVRLLDVNDNIPRLIEKQAFICVKKPEPVIIKAQDGDSEPFSKPFTFTFAHGK
KTPNWDLKPIDDTAAILTLKKIPTEDKTFTLPINIKDKAGMGVTQSFEVRVCNCTELGYC
YVAPADRSSRLGMGPTIGILAGTLGFCVVVFIVVIKRVNKGGKRKTLTEEEERERNVMM
NT seq 2700 nt   +upstreamnt  +downstreamnt
atggggttgctcagatcactctcaagtcttaggagtgactcacttgatctctccgctaag
actgtgatcatgacacccatggtgcatctgttgttgctcccactcctgttcagcattgct
ggcgggaaggatctggaggaaaagaagggcccatttgagaacacaatgctggatgtgcca
gaggggacaccagtgccgtatcccatgcatcagtttcaggtgacccacccaggtgtgaat
aatttcaggctgagtggagaggggagggaaaaaattaagatttcaagggatgggtggctc
tacctggagaagtctctggactggtctcaagaagagcattacacgatcatggtggaggcg
ttggcagatgatgaagtcgttgaaggtccaatttctgtgatcataaatgtgttggatgtc
aataacaacgctccgtacttcaaccagactgactacacagctgtggttagagaaaacaaa
gcagcaggtgtcccatttacccgcgtgtttgcgttggaccaggacgaccccaagactcct
aacgctcgtctgagctacagcctggtcagccagatccccaacaaacagcacaccctcctg
ttccagatcaaccccaacaccggagagatctccaccacggaagaaggagaacggatgcta
aaggccagagagggcatcaagtatggcaggggtgaagatcagagcattgaaacactgaag
acaaagtttgatgagtactgtccggggaacaatccccaatctatcccctatgaagcaaac
cccttcttcacctgtgtggagagagcagagatgaggaggaggaatgcggaccccttggag
gacccagactacaccctgatcgtgcgtgtgcaggacctgggaggagagtcagagaacgca
ctgagtggaaacgccagagttcacattgttgtgcagcaaaacctgtggttcagccctgga
ccaataattgttaaagagaacttactgggaaattatcccatggtcattgcaaaggtccag
tctaatgatcctgatgccatctacagtttggtgcagaaagaacgagagctgaaattcccc
ttccagataaccgaagatggagagatactcctgacagagccgctggacagagaagacaag
aacatgtacatcctggtggtgttcgcaaaggataacaacgaccaagagttggaggagcct
ttggagattcaagtcattgtgggcgatgtgaatgacaatgcaccaatgtgtgagaaagag
gagagtgtatttgaagtgcaggagaatgagcccgtaggcagtctggtaggaaagctgttg
gcccatgatattgatgatgccgagacgctgaatgctcagctgacttacaccatcctgtcc
caaaatccacccaccacacccatcgtcttctccatcgacgctgcttctggagaaattcgg
gcgttgcgctcgctgcagcgaaaagaagagcaggcctatcacctcagtgtcaaagtcagc
gacccagctttcagcaccgattgtaaagtcatcatcaaggtcattgacatcaacaacgag
ctgcctctgtttgagaagactgattatggcaaccacactctggcagaggacaccactgtt
ggacacacactgctgaccatcacagcaacagatgctgatgacccagacagcggcagctcc
ctcatcgagttccacatctcttctggcaacgacggtaacgtttttgccgtggaaacagat
ggaaaaggcgttggccatctggtcatagctaagcctttggactacgagtcttctaaagac
tacaaactccagattgatgctcgtaacccagagccgctgatgaaaaacctggagtacggc
agggaatccacagccttcgtctctgtgtctgtcaccgatgtggacgaggccccggagttt
agtctggacatcctggatgtgactgtgcctgaaaacaccaccaagggatcagtgctgctc
actgtggaggcaaaggacccagagggcaaagagatcggtttcaagttggacggtgacact
cgtggctggctggagatcgatgctgccacaggagaaatcaagaccaaagacaatctggac
agagagaccctggagactttcgaagtcactgtcactgcatttgagaaggagaaccctgag
aagtcttctgagcgtgtcgtgtctgtgaggctgctggacgtgaacgacaacatccccaga
ctgatcgagaagcaggccttcatctgcgtaaagaagcctgaacctgtcatcatcaaggcc
caagatggagacagcgagcctttctccaagcccttcacctttacctttgcccacggcaag
aaaacacccaactgggacctgaagccaatcgacgatacagcagctatactgaccctgaag
aaaataccaactgaagacaaaactttcacgcttcccattaacattaaagacaaggcaggc
atgggagtcacacagtcatttgaggtgagagtatgtaactgcacagagctgggctactgc
tatgtcgcaccggccgatcgttcctccagattaggaatgggacccaccatcgggatcctg
gctggcactctgggattctgcgttgttgtcttcattgtagtgatcaaacgtgtaaataaa
gggggcaagaggaaaaccctgactgaggaggaagagagagagaggaacgtcatgatgtag

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