Lates calcarifer (barramundi perch): 108889617
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Entry
108889617 CDS
T04895
Name
(RefSeq) zinc finger protein 687a isoform X1
KO
K24375
zinc finger protein 687
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108889617
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108889617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_ZNF592
zf-C2H2_4
zf-C2H2_11
Zf-C2H2_ZNF451_C
zf-C2H2_REST
zf-H2C2_2
zf-Di19
zf-C2H2_3rep
zf-C2H2_jaz
DUF8054_C
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
108889617
NCBI-ProteinID:
XP_018541691
UniProt:
A0AAJ7V9A0
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Position
LG15:complement(12178496..12187867)
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AA seq
1348 aa
AA seq
DB search
MGDMKTPDFDDLLAAFDIPDIDAKEAIQSSPEEERDEVGINADGGNSGSPSCFPCSPASH
SDRPVVSVIVKNTVRSESFEEEEKSGSDKTDNPTCGDVAPQVQVKLGDLTSQLGPKLPAE
EPQISNGFEGSVPRDPGVCNTEPWSLHSPLKSTLNDNESDSDRGAEVGSIQHTTDVMNSL
KPLLFPQSPTSASPNPSTTPSPHSVSPHLSPHSPQKEEAGLLGNSSSSPLPQNGNIKAEI
KHVMHSDDDDSEPDLGSPLVIQESPDTLMSSPPKFKLRPELLGSPETICHPPHLSFSLAS
AKPKPPLEDEGQPTTLSSPSGAPQPQSPEDRLPSVSTSSASTQEEKYPEHVIDERDSPES
PPPSETGLVVPNRSSSPDLTQTPTVNHKDSPHQKELMESEPSREDRPGDTEKLSEKMAEG
EENLKEENNGVGTSSEDAVSASAAETDSSPLRPLKVKIKMSTGSITRTVTGVAPKRSARA
TSRAVGSSKPSPERHNTKSKRELSQQSQAPAAAMLQDVRAAAPEGASAIKQKSTGVTKTK
VSPTAVSITKTATLPSVAISSPRVSPGGINLRSLGQKTLNSGMIHPAPSSLVPQSGSRPA
SIVNNTGAIISKSQTNLVEAFNKILNNKNLLPSYKPDLTSPLPAEWGIPLPAQGYRCLEC
GDAFALEQSLARHYDRRSLRIEVTCNHCAKRLAFFNKCSLLLHAREHKERGLIMQCSHLV
MKPVPVEQMIGQQEPTAIGVLSPSLLSSSSAPSSSSSGSVTPNPTPQSHQAVPNKKGEEV
QYTTNKCPECLTQFSSKEEVAEHFQEIKPAHTTPCTECSPPMLLPNSCSAAAHQRIHQGC
LPHVCPECGGTAKQPLFQTHLDKTCLHFARRIGYRCSSCLVVFGGLNSVKSHIQQAHCDM
FHKCPSCPMAFKSAPSIQNHITDQHPTLTDGQAMLIYKCVMCDTVFTQKPLLYIHFDTHL
TNQKVHVFKCPECTKLFSQRNSLLDHIKTHKTSTSKQELPLPPAASSRSRPSVKLESSDG
EEWIDKDKEEKAKTERMKTPSGWKCAPCHARYTDREDYITHMAEQHGKVLKKFPCNKCES
SFTTTSSLRRHIRDKHKMMNRGFRCQFCTESKKTFSSRTMLERHIQLRHSINAISQDRLG
DGDEADSSSEQDGSLGARRRRRGAVKMEHDEESTDGMSPVKRLRASSSASAPYPPPDSGF
RCAPCGFTTEDQTSFLEHISQHRRGGTEGGGLQCLQCGACFTSTSSLSRHRFITHKVRDA
FTDNQQALSMHPAPSPGNSRNHDEKSSLDCSAPASPSSQSSIAQGKEEEGTLACKVCGKH
FEKATDLNTHFRTHGMAFINARNAGKTT
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatgaagaccccagactttgatgatttgctggcagcttttgatattcctgac
attgatgccaaagaagccatccagtcaagtccagaggaggaaagggatgaggtggggatt
aatgcagatgggggaaatagtgggtctccgtcatgctttccctgctctcctgcctcacac
agcgaccgccctgtggtcagcgttattgtgaagaacacagtgcggtctgagtcttttgaa
gaggaggagaagtctggcagcgataaaactgacaatcctacatgtggtgatgtagcccct
caggttcaggtcaagttgggtgacctcacctcacagcttggacccaaactgcctgccgag
gagccccagatttccaatggctttgagggctctgtccccagggatccaggagtgtgcaac
acagaaccatggtccctgcattcaccactgaagtccacactgaatgataatgagagtgac
agtgatagaggagccgaggttggatcgatccagcacaccactgatgtcatgaacagtttg
aagccccttctctttccccagtctccgaccagtgccagtcccaacccctcaactactcct
tctcctcattctgtcagccctcacctttctcctcactcgcctcagaaagaagaagctggt
ctccttggtaattcttcatcttcccctttaccacaaaatggaaatattaaagctgaaatt
aagcatgtcatgcactcagatgatgatgactcagaaccagacttaggaagtccgctggtg
atccaagagagcccagacactctaatgtcctccccacccaaatttaaactacggcctgag
ctgcttgggtctcctgaaaccatttgtcatcctcctcatctctccttttctctggcatct
gcaaagcctaaaccccctcttgaggatgaggggcagcctaccaccctgagttctccttct
ggagctcctcagcctcagagcccagaggaccgcctcccctctgtcagcacgagctctgca
tcaacccaagaagagaaatacccagagcatgtgattgatgagagggactctcctgagagc
ccaccccctagtgagacaggtcttgtggtccccaacagaagcagcagccccgatttgacc
caaacaccaacggtgaaccacaaggactctcctcaccaaaaggagctcatggaaagtgag
cctagcagagaggacaggccaggtgacactgagaagctgagtgaaaagatggctgaaggt
gaggaaaatttaaaggaggagaacaatggtgttggcacatcatctgaggatgctgtgtct
gctagtgctgcagagacagattcatctccactgcgtcccctcaaagttaaaatcaaaatg
tctacaggaagcatcacaagaaccgtgactggggtggcacctaaaagaagcgcaagagcc
acctctagggctgtgggtagttcaaaaccttcaccagaacgtcataacacaaaatccaag
agggaattatcacagcagtctcaggcacctgcagcagcgatgctccaagatgtgcgtgct
gcagcaccagaaggcgccagtgcaattaaacagaaatccacaggggtcaccaaaacgaaa
gtttctcccacagctgtcagcattacaaaaactgcaaccctgccctctgtcgccatctca
tcccccagagtcagcccaggcgggatcaacctgcgcagcctgggccagaagactctcaac
agtgggatgatacatcctgctccgtcgtccctcgtccctcaaagtggcagcagaccagca
tctatagtcaacaacactggggcaatcatatcaaagagccaaaccaacctagtagaagct
tttaacaaaatcctgaacaacaagaacctgcttcctagttataaaccagacctgacgtcg
cctcttcctgcagagtggggcattcctctgcctgcacagggttaccgctgtttggagtgt
ggtgatgcctttgccttggagcagagtttggcgcgacactacgatcgacgctcgctgagg
atcgaagtgacttgtaaccactgtgccaagcgcttggccttcttcaacaaatgtagcctc
cttttacacgccagagagcacaaggagagaggcctgatcatgcagtgttcacacctggtt
atgaaacctgtacccgtggagcagatgattggccagcaggaacctacggcaattggtgtg
ctctctccatctctcttgtcatcctcttcagcaccatcatcatcctcttcagggtcggtc
accccgaacccaacaccccagtcacatcaagccgtacccaacaagaagggagaagaagtg
cagtacacgactaataaatgtcctgagtgtctgactcagtttagcagcaaagaagaggtg
gctgagcactttcaagaaatcaaaccagcacacactactccttgcacagagtgctctccg
cctatgctcttgcccaacagttgcagtgcagcagctcatcaacgcatccaccaaggctgc
ctgccacatgtgtgcccagagtgtgggggcacggccaagcagccgctatttcagacacat
ctggacaagacctgtttgcactttgcccgccgcatcggatacagatgttccagttgcctg
gtggtgtttggagggctgaactcagtgaagtctcacatccagcaggctcattgcgatatg
ttccacaaatgccccagctgtcccatggctttcaaatctgcccccagcattcagaaccac
atcactgatcaacatccaacactcactgatggacaggcgatgttgatctataaatgtgtc
atgtgtgacacagtttttacccaaaagcccctgctatacatccactttgacactcattta
accaaccagaaggtgcatgtatttaaatgccctgaatgcaccaagctgttttcgcagagg
aattccctactggaccatatcaagacgcacaagacttccacatcaaaacaagagttgcct
ttgccgcctgcggcttcctctcgttcacggccctcagtgaagttagagagctcagatggg
gaggagtggatagataaagataaagaagagaaggcgaagacagagaggatgaagaccccc
tcagggtggaagtgcgcaccctgccacgcacgctacacagaccgggaagactacatcacc
cacatggccgaacagcatggcaaggttctgaagaagtttccttgtaacaaatgtgagagc
tccttcactacgacttccagtctgcgacgtcacatcagagacaaacacaaaatgatgaat
cgtggcttccgctgccagttctgtactgagagtaagaaaacattcagcagcaggacgatg
ttggagaggcatattcagctgagacacagcatcaacgctattagccaggacagactggga
gatggagatgaagctgacagctcctcagaacaggatggtagtttgggggctcgtcggaga
cggagaggagccgtgaagatggagcacgatgaggaatccacagatgggatgagtccagtg
aagaggttgcgggcctcctcctctgcatccgctccatacccgcctcctgactctgggttt
cgctgtgcgccctgcggtttcaccacagaggaccagacatcattcctggagcacatcagc
cagcacaggcgaggagggacagagggcggtggtctgcagtgtctgcagtgcggcgcctgc
ttcacatctacctcctccctatcacgccatcgcttcatcacccacaaagtgagagatgca
ttcactgacaaccagcaagctctcagcatgcacccagcaccttcccctggtaacagcaga
aaccacgatgagaagagttctcttgattgttctgcaccagcatcaccctcctctcagtcc
tccatagctcaggggaaggaagaggagggcacactggcctgtaaggtttgtggtaaacac
tttgagaaggcaactgatctgaatacgcatttcagaactcatggtatggcttttatcaat
gcaaggaacgcagggaaaactacctaa
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integrated database retrieval system
