Lates calcarifer (barramundi perch): 108889667
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Entry
108889667 CDS
T04895
Symbol
cdcp1a
Name
(RefSeq) CUB domain-containing protein 1
KO
K06732
CUB domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108889667 (cdcp1a)
CD molecules [BR:
lcf04090
]
Proteins
108889667 (cdcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDCP1_CUB_6
CUB_CDCP1_2
CUB_CDCP1_1
CUB
CUB_CDCP1_4th
Cadherin_C_2
LAX
Sigma_reg_N
Cas_Csy4
WSS_VP
TMEM154
Motif
Other DBs
NCBI-GeneID:
108889667
NCBI-ProteinID:
XP_018541779
UniProt:
A0AAJ7V987
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All DBs
Position
LG15:complement(23765253..23772211)
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AA seq
821 aa
AA seq
DB search
MSSTTVRVCLQLLLLSCIVSAVSGVQKLNITPDRGTTFNISSTQVKGCQVCTGSGRSRRC
STSLLLKDSTPVSVEFDCSRPQDVFRVEISRKIECTTKSCNGHVIQADYGSLPLLDFNRK
FTWNLKASAPKAFKIDFTKAGLRQISPSERCPDRHSYTLHALQTTGNAAVGKYCGTGPIS
SAQILNLGSFSLEVPAGQRLQNGQFDVSVGEEIKSLARITLTLPKGASSTELLSPNYPDS
FPDDDVMEWYFQVPNKHKTGIQFLNLTQPSCLKKETAAEYHTKGRQALVLSLTEPQPDRF
QGNFSLTLRNCEMDRRQAGSPGLSLNVRVSTSSTSSPVLCKVDLREVDGLSLYIEKLRPD
SDCEMKINSVTMEKITVTANSDLSFQDCLPEDLQVTAMKVIGCSQLQDCPKTPVRLSLPA
LPSCLPAPLRSATWILHPPVQGTVELTSPSGPLKQSLPGQPCNDSILINVAEDDGTAIGH
FCPQGAIQKIQIHTNMSVTVSSMGGRALKTCYKNVLDACFKEEISERYIFTVSSKKDTPV
LLATPGWPVGMQSYSTVSWIVSVPPKMEAHLMFTNISQPKCSNRHTNIRVQRVGSLEEEY
SRREDEDAGRELVVSDSFYLNMSNCMPERGHFSVITKITLQESKNLLLTIILSVVAALLA
IFVIVLVVVCVVVRKKKKQLNHQVSIYNPNGTSFLPGQNRFPKTREDNESHVYASIEDTL
VYTHLLRKGMEIGVYGESDTHRPFTGHTDSQKPLVSKYSDGDGMEVDTYRSFQYSSQQAP
PLPNRPASLPLVDNDIYQSEDQREEERSLNLGERQEPEGGN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgacaacggtcagagtctgtctacagcttttacttctgtcatgcatcgtctcc
gctgtatcaggggtccagaagctaaacatcacccctgacagagggaccaccttcaacatc
agcagtactcaggtcaaaggttgtcaggtgtgtacagggtcagggcgttcacggcgatgt
agtacctctctgctgttaaaagacagcactcctgtctcagtggagtttgattgctccaga
cctcaagatgtattcagggtggaaattagccgcaaaatagaatgtaccacaaagtcgtgc
aatgggcacgtcatccaggctgactacggctcgcttcccttgctggattttaaccgcaag
ttcacctggaacctgaaggcatcagcaccaaaagcgttcaaaatagactttactaaggct
ggtctgagacaaattagtccgtctgagagatgtccagacagacacagctacaccctccat
gctctccagactacagggaacgctgccgtagggaaatactgcgggacgggcccaatcagt
agcgctcagatactgaatctgggcagcttttctctggaggtcccagcagggcagaggctg
caaaatggccagtttgatgtgtctgtcggggaggaaatcaagtcccttgccagaattaca
ctgacattaccaaaaggggcctcgtccacagagctgctgtctccaaactacccggacagt
tttcccgacgacgacgtgatggagtggtactttcaggtcccgaacaaacacaagaccggc
attcagttcctaaacctcacgcagccgagttgtctgaagaaggagactgcggcggagtac
cacaccaaagggagacaggcgttggtgctgagtctgacagagccccagccggaccggttt
caggggaacttctccctgacgctgaggaattgtgagatggacagaagacaagctggatct
cctggactctcactaaatgtccgggtgtccacttcaagtacaagttcaccagtgttgtgt
aaagtggacctgcgcgaagtggatggcctctctttgtacatcgagaagttgagaccggac
tctgactgcgagatgaaaataaactctgtgacgatggagaagatcacagtcacggcaaac
agtgacctgtctttccaggactgtcttcctgaagacttacaagtcactgccatgaaagtc
atagggtgtagtcaactccaagactgcccaaagacaccagtccgcctctcactgcctgcg
ctgccgagctgcctccccgcccctctgaggagtgcgacctggatcctccatcctcccgtg
cagggcaccgtggagctgacttctccctctgggccactcaagcagtccctgcccggacag
ccgtgcaacgacagcatcttgatcaatgtggccgaggatgacggcactgctatcggacac
ttctgcccccagggagccatacagaagatccaaatccacaccaacatgtctgtcactgtg
tccagcatggggggtagagcgctgaagacgtgttacaagaacgtgctggacgcctgtttt
aaagaggagatatcagaaagatacatattcactgtgtcttcaaagaaagacacccccgtc
cttctggctactcccggttggccagtgggaatgcagtcttactccaccgtctcctggatt
gtctccgtccccccgaagatggaggcgcacctgatgttcaccaacatcagccagcccaag
tgcagcaaccgccacaccaacatcagggtgcagagggtcggcagcctggaggaggaatac
agccgtagggaggacgaggacgccggcagggagctcgtcgtctctgacagtttctacctc
aacatgtccaactgtatgcccgagagaggacacttcagcgtcatcaccaagatcaccctg
caggagagcaagaaccttctgctgacgatcatcctgagtgtggtggctgctctgttggcc
atttttgtcattgtgctggtagtggtctgtgtagtggttaggaagaagaagaagcagctg
aatcatcaggtgtccatctacaatccaaacggcaccagcttcctgcctggacaaaacagg
ttccctaaaacgcgggaagacaacgagtcccatgtgtacgcctccatcgaggacacgctg
gtctacacgcacttgctgaggaagggtatggagattggcgtctatggagaatctgacacg
caccggcccttcacgggacacacagactcacaaaagccgctggtctccaaatactctgat
ggagacggcatggaggtcgatacttatcgctcgtttcagtactcatctcagcaggcgcct
ccgcttcccaacaggcctgcaagcctaccactggtggacaatgatatttaccagagtgag
gaccaaagggaggaggagcggtctctgaatctgggggagaggcaggagccagagggaggg
aactga
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